2-[1-(Hydroxyimino)ethyl]-2,5,5-trimethylperhydropyrimidine–butane-2,3-dione monooxime (1/1)

The title compound, C₉H₁₉N₃O·C₄H₇NO₂, displays strong intramolecular O—H⃛N [O⃛N 2.6743 (13) Å] and N—H⃛N [N⃛N 2.6791 (15) Å] hydrogen bonds, and strong intermolecular O—H⃛N [O⃛N 2.7949 (15) Å] and N—H⃛O [N⃛O 3.0924 (16) Å] hydrogen bonds. This creates chains of per­hydro­pyrimidine mol­ecules, linked by hydrogen bonds. Each chain is linked to a partner chain, through hydrogen bonds to two butane-2,3-dione monooxime mol­ecules, in a structure reminiscent of a ladder.     

N‐(6‐Amino‐3,4‐di­hydro‐3‐methyl‐5‐nitro­so‐4‐oxopyrimidin‐2‐yl)‐(S)‐glutamic acid: a three‐dimensional framework structure built from O—H⃛O,N—H⃛O and O—H⃛N hydrogen bonds

The title compound, C₁₀H₁₃N₅O₆, exhibits a highly polarized molecular–electronic structure and the conformation is influenced by two intramolecular N—H⃛O hydrogen bonds. The mol­ecules are linked into a single framework by hydrogen bonds of types O—H⃛O [O—H = 1.22, H⃛O = 1.38, O⃛O = 2.558 (6) Å and O—H⃛O = 160°], N—H⃛O [H⃛O = 2.26, N⃛O = 2.866 (6) Å and N—H⃛O = 126°] and O—H⃛N [O—H = 1.26, H⃛N = 1.56, O⃛N = 2.811 (6) Å and O—H⃛N = 170°]. The substructure generated by the O—H⃛O and N—H⃛O hydrogen bonds takes the form of a double helix.     

6‐Amino‐3‐methyl‐5‐nitro­so­pyrimi­dine‐2,4(1H,3H)‐dione forms a three‐dimensional hydrogen‐bonded framework structure

Molecules of the title compound, C₅H₆N₄O₃, are linked into a single three‐dimensional framework by a two‐centre N—H⃛O hydrogen bond [H⃛O = 1.92 Å, N⃛O = 2.785 (2) Å and N—H⃛O = 168°], a two‐centre N—H⃛H hydrogen bond [H⃛N = 2.19 Å, N⃛N = 3.017 (2) Å and N—H⃛N = 157°] and the intermolecular component of an effectively planar three‐centre N—H⃛(O)₂ hydrogen bond [H⃛O = 2.03 and 2.31 Å, N⃛O = 2.645 (2) and 2.957 (2) Å, N—H⃛O = 126 and 130°, and O⃛H⃛O = 101°].     

4,4′‐Tri­methyl­enedipyridinium bis­[carboxy­methyl­phos­pho­nate(1–)]: a three‐dimensional framework structure built from O—H⃛O,N—H⃛O and C—H⃛O hydrogen bonds

In the title compound, C₁₃H₁₆N₂²⁺·2C₂H₄O₅P⁻, the cation lies across a twofold rotation axis in space group Fdd2. The anions are linked into molecular ladders by two O—H⃛O hydrogen bonds [H⃛O = 1.73 and 1.77 Å, O⃛O = 2.538 (2) and 2.598 (3) Å, and O—H⃛O = 160 and 170°], these ladders are linked into sheets by a single type of N—H⃛O hydrogen bond [H⃛O = 1.75 Å, N⃛O = 2.624 (3) Å and N—H⃛O = 171°] and the sheets are linked into a three‐dimensional framework by a single type of C—H⃛O hydrogen bond [H⃛O = 2.48 Å, C⃛O = 3.419 (4) Å and C—H⃛O = 167°].     

4‐Amino‐2,6‐di­methoxy­pyrimidine: hydrogen‐bonded sheets of R22(8) and R66(28) rings,reinforced by an aromatic π–π‐stacking interaction

Molecules of the title compound, C₆H₉N₃O₂, are linked by an N—H⃛O hydrogen bond [H⃛O = 2.29 Å, N⃛O = 3.169 (2) Å and N—H⃛O = 173°] and an N—H⃛N hydrogen bond [H⃛N = 2.12 Å, N⃛N = 2.999 (2) Å and N—H⃛N = 175°] into sheets containing centrosymmetric R(8) and R(28) rings; the sheets are reinforced by a single aromatic π–π‐stacking interaction.     

meso‐5,5,7,12,12,14‐Hexamethyl‐1,4‐diaza‐8,11‐diazoniacyclotetradecane bis(2‐naphthoate) ethanol disolvate: centrosymmetric five‐component aggregates linked into sheets by C—H⃛π(arene) hydrogen bonding

The title compound is an ethanol‐solvated salt, C₁₆H₃₈N₄²⁺·2C₁₁H₇O₂⁻·2C₂H₆O, in which the cation lies across a centre of inversion in P2₁/c. The ions are linked by N—H⃛O hydrogen bonds [H⃛O = 1.70 and 2.30 Å, N⃛O = 2.624 (2) and 3.136 (2) Å, and N—H⃛O = 178 and 151°], and the ethanol mol­ecule is linked to the anion by an O—H⃛O hydrogen bond [H⃛O = 1.90 Å, O⃛O = 2.728 (2) Å and O—H⃛O = 171°], to form a centrosymmetric five‐component aggregate. C—H⃛O hydrogen bonds and aromatic π–π‐stacking interactions are absent, but the aggregates are linked into sheets by a single C—H⃛π(arene) hydrogen bond.     

4‐Iodo‐N‐(2‐nitro­phenyl­sulfanyl)­aniline: π‐stacked sheets generated by a combination of N—H⃛O and C—H⃛O hydrogen bonds

Molecules of the title compound, C₁₂H₉IN₂O₂S, are linked by one N—H⃛O hydrogen bond [H⃛O = 2.16 Å, N⃛O = 2.935 (4) Å and N—H⃛O 147°] and two C—H⃛O hydrogen bonds [H⃛O both 2.49 Å, C⃛O = 3.231 (5) and 3.220 (5) Å, and C—H⃛O = 135 and 134°] into sheets which themselves are weakly linked by an aromatic π–π‐stacking interaction between iodinated rings in centrosymmetrically related mole­cules. There are no iodo–nitro interactions.     

4-(1H-Benzimidazol-3-ium-2-yl)­benzoate dihydrate

In the title compound, C₁₄H₁₀N₂O₂·2H₂O, the water mol­ecules are involved in hydrogen bonds and interactions. Intermolecular and intramolecular O—H⃛O hydrogen bonds connect the complex into chains along the a axis, whereas N—H⃛O intermolecular hydrogen bonds and C—H⃛O interactions interconnect these layers forming a three-dimensional network.     

meso‐5,5,7,12,12,14‐Hexa­methyl‐4,11‐di­aza‐1,8‐diazo­nia­cyclo­tetra­decane (S)‐malate(2–) methanol disolvate: a chain of rings generated by two pairs of N—H⃛O hydrogen bonds

The title compound is a methanol‐solvated salt, C₁₆H₃₈N₄²⁺·C₄H₄O₅²⁻·2CH₃OH, in which the ionic components are linked into chains by two pairs of N—H⃛O hydrogen bonds [H⃛O = 1.78–2.21 Å, N⃛O = 2.702 (14)–3.094 (8) Å and N—H⃛O = 160–179°]. The methanol mol­ecules are pendent from the chain and are linked to it by O—H⃛O hydrogen bonds [H⃛O = 1.86 and 1.89 Å, O⃛O = 2.691 (9) and 2.708 (16) Å, and O—H⃛O = 168 and 165°].     

Ammonium N‐(6‐amino‐3,4‐di­hydro‐3‐methyl‐5‐nitro­so‐4‐oxopyrimidin‐2‐yl)­glycinate monohydrate forms hydrogen‐bonded bilayers

In the title compound, NH₄⁺·C₇H₈N₅O₄⁻·H₂O, the independent components are linked into bilayers by an extensive series of two‐centre N—H⃛O hydrogen bonds [H⃛O = 1.85–1.96 Å, N⃛O = 2.776 (2)–2.840 (2) Å and N—H⃛O = 149–172°], and by asymmetric three‐centre N—H⃛(O)₂, O—H⃛(N,O) and O—H⃛(O)₂ hydrogen bonds.     

Bis(2‐amino­pyridine‐κN1)(benzoato‐κO)silver(I)

In the title compound, [Ag(C₇H₅O₂)(C₅H₆N₂)₂], the Ag^I atom is tricoordinated by two independent pyridine N atoms and one benzoate O atom in a nearly planar geometry. An intramolecular N—H⃛O hydrogen bond forms an S(8) graph ring. The packing is built from molecular layers stabilized by two types of N—H⃛O hydrogen bond. Intermolecular Ag⃛N and intramolecular Ag⃛O contacts were also observed, together with three weak intermolecular C—H⃛π interactions.     

Hydro­gen bonding in nitro­aniline analogues: a three-dimensional framework in 2-amino-6-nitro-1,3-benzo­thia­zole

In the title compound, C₇H₅N₃O₂S, the mol­ecules are linked into a three-dimensional framework by a combination of a three-centre N—H⃛(O)₂ hydrogen bond, and two-centre N—H⃛N and C—H⃛O hydrogen bonds.     

4-{[(1E)-(2-Hydroxyphenyl)methyl­idene]amino}-1,5-dimethyl-2-phenyl-2,3-dihydro-1H-pyrazol-3-one

In the title compound, C₁₈H₁₇N₃O₂, a strong intramolecular O—H⃛N hydrogen bond [N⃛O 2.607 (3), O—H 0.97 (3) and H⃛N 1.71 (3) Å, and O—H⃛N 153 (2)°] was observed, which leads to a unique phenol–imine tautomerism in the solid state. The C=N imine bond distance and the C—N—C bond angle [1.287 (2) Å and 121.7 (1)°, respectively] indicate the existence of this phenol–imine tautomer. In solution, the phenol–imine tautomer of the title free Schiff base ligand is dominant in both polar and non-polar solvents, as supported by ¹H NMR and UV–visible spectroscopic data.     

6,6′‐Di­methoxy‐2,2′‐[(1R,2R)‐cyclo­hexane‐1,2‐diyl­bis­(nitrilo­methyl­idyne)]­diphenol: three C—H⃛O hydrogen bonds generate a three‐dimensional framework

Molecules of the title compound, alternatively called (R,R)‐N,N′‐bis(3‐methoxysalicylidene)‐trans‐cyclohexane‐1,2‐diamine, C₂₂H₂₆N₂O₄, contain two intramolecular O—H⃛N hydrogen bonds and adopt a conformation with approximate twofold rotational symmetry. The mol­ecules are linked by three C—H⃛O hydrogen bonds [H⃛O = 2.45–2.55 Å, C⃛O = 3.329 (2)–3.398 (2) Å and C—H⃛O = 142–172°] into a continuous framework.     

2‐(Hydro­xy­methyl)­pyridinium di­hydrogenphosphate

The title compound, C₆H₈NO⁺·H₂PO₄⁻, consists of 2‐(hy­droxy­methyl)­pyridinium and di­hydrogen­phosphate ions. The di­hydrogen­phosphate moieties are linked into chains by pairs of P—O—H⃛O—P hydrogen bonds. The 2‐(hydroxy­methyl)­pyridinium cations are connected to the di­hydrogen­phosphate units by O—H⃛O and N—H⃛O hydrogen bonds. Weak π–π interactions help to determine the interchain packing.     

Hydro­gen bonding in C-methyl­ated nitro­anilines: the three-dimensional framework structure of 2-methyl-4-nitro­aniline

Molecules of 2-methyl-4-nitro­aniline, C₇H₈N₂O₂, act as double donors and as double acceptors of N—H⃛O hydrogen bonds [N⃛O 3.117 (3) and 3.239 (3) Å; N—H⃛O 169 and 136°]. The mol­ecules are thereby linked into a three-dimensional framework.     

2‐Amino‐5‐nitro‐4,6‐dipiperidinopyrimidinium hydrogen­sulfate monohydrate: hydrogen‐bonded sheets containing highly distorted cations

In the title compound, C₁₄H₂₃N₆O₂⁺·HSO₄⁻·H₂O, the pyrimidinium ring of the cation adopts a twist‐boat conformation, induced by steric clashes between adjacent ring substituents; the anions and the water mol­ecules are linked by three O—H⃛O hydrogen bonds [H⃛O = 1.70–1.78 Å, O⃛O = 2.548 (2)–2.761 (2) Å and O—H⃛O = 161–168°] into chains of edge‐fused R(12) rings, which are linked into sheets by the cations, via three N—H⃛O hydrogen bonds [H⃛O = 1.96–2.17 Å, N⃛O = 2.820 (2)–2.935 (2) Å and N—H⃛O = 145–173°].     

Hydro­gen bonding in two tetracyclic indole alkaloids

3-Acetyl-1,6,7,12b-tetra­hydro­indolo­[2,3-a]­quinolizin-2(12H)-one, C₁₇H₁₆N₂O₂, consists of two symmetry-independent mol­ecules and each forms a layered structure stabilized by N—H⃛O and C—H⃛O hydrogen bonds. In 3-acetyl-6,7-di­hydro­indolo­[2,3-a]­quinolizin-4(12H)-one monohydrate, C₁₇H₁₄N₂O₂·H₂O, the structure is stabilized by O—H⃛O, N—H⃛O and C—H⃛O hydrogen bonds, with the ordered water mol­ecule playing a crucial role in the self-assembly. Contribution from the weak interactions to the strong hydrogen-bonded network is a common feature in both structures.     

A hydrogen-bonded adduct containing seven-component supramolecular aggregates

The title compound is a salt, 3,6,9,16,19,22-hexaaza­tri­cyclo­[22.2.2.2^11,14]­triaconta-1(26),11(29),12,14(30),24,27-hexa­ene–3,5-di­nitro­benzoic acid–methanol (1/4/2), C₂₄H₄₂N₆⁴⁺·4C₇H₃N₂O₆⁻·2CH₄O, in which the cation lies across a centre of inversion and one of the two independent anions is positionally disordered over two sets of atom sites having equal occupancy. The components are linked by four types of N—H⃛O hydrogen bond [N⃛O 2.674 (2)–2.815 (2) Å; N—H⃛O 149–163°] and one type of O—H⃛O hydrogen bond in which the acceptor is disordered over two closely adjacent sites [O⃛O 2.67 (4) and 2.75 (4) Å; O—H⃛O 172 and 173°], forming centrosymmetric seven-component aggregates.     

Hydrogen-bonded sheets in the 1:1 salt of tet-b and trimesic acid

Tet-b (racemic 5,5,7,12,12,14-hexa­methyl-1,4,8,11-tetra­aza­cyclo­tetra­decane, C₁₆H₃₆N₄) and trimesic acid (1,3,5-benzene­tri­carboxylic acid, C₉H₆O₆) form a salt partially solvated by both water and methanol, i.e. 5,5,7,12,12,14-hexa­methyl-1,4,8,11-tetra­aza­cyclo­tetra­decane–1,3,5-benzene­tri­carboxyl­ic acid–methanol–water (1/1/0.78/1.12), C₁₆H₃₈N₄²⁺·C₉H₄O₆²⁻·0.78CH₄O·1.12H₂O. The anions are linked by O—H⃛O hydrogen bonds [O⃛O 2.442 (4) and 2.458 (4) Å; O—H⃛O 170 and 171°] into zigzag chains; orientationally disordered cations are linked to the anion chains by means of N—H⃛O hydrogen bonds [major orientation: N⃛O 2.695 (3)–3.071 (4) Å, N—H⃛O 148–179°; minor orientation: N⃛O 2.75 (2)–3.34 (2) Å, N—H⃛O 147–170°] and link the chains into sheets. The solvent mol­ecules are all disordered, but appear to play no significant structural role apart from space filling.