Microwave-assisted "libraries from libraries" approach toward the synthesis of allyl- and C-cyclopropylalkylamides

Cascade reactions of internal and terminal alkynes, zirconocene hydrochloride, dimethylzinc, and phosphinoyl imines (prepared in one step from aldehydes and diphenylphosphinoyl amide) lead to allylic phosphinoyl amides after aqueous workup. Microwave acceleration allows the completion of this one-pot reaction sequence in 10 min. These allylic amides can be converted into a variety of derivatives, including carbamates and sulfonamides, or reacted prior to workup with diiodomethane to give novel C-cyclopropylalkylamides. A solution-phase "libraries from libraries" approach was used to generate an intermediate 20-member library which was subsequently expanded to a 100-member library by a series of N-functionalizations. The biological activity was evaluated in an assay for competitive binding to the estrogen receptor (ERalpha), revealing three potent lead compounds of a new structural type.     

Microwave-assisted organic synthesis in microstructured reactors

The coupling of microwave heating with microprocessing in continuous-flow reactors has been reviewed in various organic synthesis reactions. The fast growing field of microwave and microreactor technology has a significant impact on the development of fine chemicals industry. Both technologies offer not only the possibility of realizing many of the individual advantages integrated into one combined system, but also the potential of eliminating the major hurdle of a limited microwave penetration depth for large-scale chemical synthesis. Metal film-coated capillary microreactors allow creation of local hot spots to achieve temperatures far in excess of the solvent temperature, which accelerates chemical reactions under MW heating.     

Combinatorial liquid-phase synthesis of structurally diverse benzimidazole libraries

An expedient liquid-phase synthesis for construction of the diverse benzimidazole libraries is described. Nucleophilic aryl substitution of poly(ethylene glycol)-supported 4-fluoro-3-nitrobenzoic acid 3 with several primary amines under basic conditions, followed by Zn/NH(4)Cl mediated nitro group reduction, gave the PEG bound diamines 5. Subsequent cyclization of immobilized o-phenylenediamine 5 using thiocarbonyldiimidazole (TCD) or thiophosgene in dichloromethane furnished benzimidazole-2-thiones 6. Treatment of 6 with alkyl halides and benzylic halides in the presence of triethylamine provided 1-substituted-2-alkylthio-5-carbamoylbenzimidazoles on the support. The desired products 8 were severed from the PEG under mild conditions in high yield and high purity.     

Synthesis and application of functionally diverse 2,6,9-trisubstituted purine libraries as CDK inhibitors.

BACKGROUND: Purines constitute a structural class of protein ligands involved in mediating an astonishing array of metabolic processes and signal pathways in all living organisms. Synthesis of purine derivatives targeting specific purine-binding proteins in vivo could lead to versatile lead compounds for use as biological probes or drug candidates. RESULTS: We synthesized several libraries of 2,6, 9-trisubstituted purines using both solution- and solid-phase chemistry, and screened the compounds for inhibition of cyclin-dependent kinase (CDK) activity and human leukemic cell growth. Lead compounds were optimized by iterative synthesis based on structure-activity relationships (SARs), as well as analysis of several CDK-inhibitor cocrystal structures, to afford several interesting compounds including one of the most potent CDK inhibitors known to date. Unexpectedly, some compounds with similar CDK inhibitory activity arrested cellular proliferation at distinctly different phases of the cell cycle and another inhibitor directly induced apoptosis, bypassing cell-cycle arrest. Some of these compounds selectively inhibited growth of cells derived from specific tumors. CONCLUSIONS: 2,6,9-Trisubstituted purines have various and potent biological activities, despite high concentrations of competing endogenous purine ligands in living cells. Purine libraries constitute a versatile source of small molecules that affect distinct biochemical pathways mediating different cellular functions.     

Microwave-assisted organic synthesis: scale-up of palladium-catalyzed aminations using single-mode and multi-mode microwave equipment

Batch wise scale-up of Buchwald-Hartwig aminations under microwave irradiation has been investigated for the first time. Multi-mode (microSYNTH and MARS) (several vessels irradiated in parallel per batch) as well as single-mode (Discover) (one vessel irradiated per batch) platforms can be successfully used for this purpose with trifluoromethylbenzene (benzotrifluoride: BTF) as amination solvent. The obtained yields indicate a direct scalability in BTF for all the studied aminations. The Voyager equipment (based on a Discover platform) is the most convenient system since it allows an automatic continuous batch wise production without the necessity to manually load and unload reaction vessels.     

Microwave-assisted fluorous synthesis of 2-aryl-substituted 4-thiazolidinone and 4-thiazinanone libraries

A straightforward two-step protocol for the synthesis of 2-aryl-substituted 4-thiazolidinone and 4-thiazinanone libraries has been developed. The one-pot, three-component reactions of fluorous benzaldehydes with amines and mercaptoacetic acid or mecaptopropanoic acid produce the heterocyclic systems. Intermediates purified by fluorous solid-phase extraction are subject to microwave-assisted palladium-catalyzed coupling reactions to simultaneously cleave the fluorous tag and introduce the biaryl and thioaryl functional groups to the 2-position of 4-thiazolidinones and 4-thiazinanones.     

Microwave-assisted organic synthesis of a high-affinity pyrazolo-pyrimidinyl TSPO ligand

We herein report a dramatically improved total synthesis of the high-affinity translocator protein (TSPO) ligand DPA-714, featuring microwave-assisted organic synthesis (MAOS). Compared with previously described approaches, our novel MAOS method dramatically reduces overall reaction time without adversely effecting reaction yields. We envision that the described MAOS protocol may be suitably applied to high-throughput, diversity-oriented synthesis of novel compounds based on the pyrazolo-pyrimidinyl scaffold. Such an approach could accelerate the development of focused libraries of novel TSPO ligands with potential for future development as molecular imaging and therapeutic agents.     

Design of diverse and focused combinatorial libraries using an alternating algorithm

There is considerable research in chemistry to develop reaction conditions so that any of a very large number of reactants will successfully form new compounds, e.g. for two components, A(i) + B(j) --> A-B(ij). The numbers of A's and B's usually make it impossible to make all the possible products; with multicomponent reactions, there could easily be millions to billions of possible products. There is a need to identify subsets of reagents so that the resulting products have desirable predicted properties. Our idea is to select reactants sequentially and iteratively to optimize the evolving candidate library. The new Alternating Algorithm, AA, can be used for diversity, a space-filling design, or for a focused design, using either a near neighborhood or structure-activity relationship, SAR. A diversity design seeks to select compounds different from one another; a focused design seeks to find compounds similar to an active compound or compounds that follow a structure activity relationship. The benefit of the method is rapid computation of diversity or focused combinatorial chemical libraries.     

Microwave-assisted synthesis of cyclopentanones using the relevant phosphorus ylides

A one-pot synthesis of cyclopentanone derivatives from phosphorus ylide under lab-type microwave assisted methodology was described. The phosphorus ylides were obtained via the reaction of activated acetylenic compounds, ethyl 4-chloroacetoacetate and triphenylphosphine. The structure of phosphorus ylides was assigned by 1H, 13C and 31PNMR. The phosphorus ylides as precursor were crystallized as two enantiomers (R,R) and (S,S) and one of the phosphorus ylide structures was confirmed by single X-ray crystallography.     

Microwave-assisted cyclic amidine synthesis using TiCl4

Microwave-assisted treatment of various heterocyclic amides (benzodiazepinone, phthalazone) with TiCl(4) in the presence of primary or secondary amines provides the corresponding amidines. In addition to the interest of the microwaves for this reaction, our study highlights the higher reactivity of the cyclic acetamide moiety compared to the cyclic benzamide moiety towards this TiCl(4)-mediated reaction.     

Purification of high-throughput organic synthesis libraries by counter-current chromatography

Experiments were performed to evaluate whether counter-current chromatography (CCC) could function as an alternative purification method to reversed-phase high-performance liquid chromatography (RP-HPLC) and normal-phase supercritical fluid chromatography (SFC). RP-HPLC and SFC are the routine methods currently used in our high-throughput purification (HTP) facility for the purification of high-throughput organic synthesis (HTOS) libraries and medicinal chemistry reaction mixtures. Pre-equilibration of the solvent mixture layers was not mandatory for effective chromatography when hexanes–ethyl acetate–methanol–water (HEMW) solvent mixtures were used. Key to the use of CCC for high-throughput applications is the ability to effectively select a solvent system appropriate to each library member. Pilot-scale CCC elution time was used to estimate a starting solvent ratio and RP-HPLC retention time was then used to adjust solvent ratios within a particular library. It was also found that dimethyl sulfoxide (DMSO) and DMSO–methanol were suitable as sample injection solvents when using the HEMW solvent systems.     

Microwave-assisted catalyst-free synthesis of tetrasubstituted pyrroles using dialkyl acetylenedicarboxylates and monophenacylanilines

An efficient catalyst-free microwave-assisted synthesis of tetrasubstituted pyrroles using dialkyl acetylenedicarboxylates and substituted monophenacylanilines has been developed. Axial chirality has been noticed in some N-(α-naphthyl/2-isopropylphenyl)-2,3-dicarbethoxy-4-arylpyrroles, but not with N-aryl-2,3-dicarbethoxy-4-(α-naphthyl)pyrrole.     

Microwave-assisted base-free synthesis of trans-cinnamic acids using hypervalent iodonium salts

A fast and convenient base-free Heck reaction of acrylic acid with hypervalent iodonium salts was achieved under microwave irradiation in water, providing a simple method for the synthesis of trans-cinnamic acids in good yields in short time.     

Microwave-assisted synthesis of macroheterocyclic compounds using 1-alkyl-1,2,4-triazoles

Russian Chemical Bulletin - Microwave-assisted synthesis of new representatives of triazole-containing macroheterocycles bearing 1-alkyl-1,2,4-triazole moieties was described. The developed...     

Microwave-assisted synthesis of tetrahydroindoles

An efficient synthesis of tetrahydroindoles with different substituents in position 1 is described. Microwave-assisted aminolysis of 4-oxo-4,5,6,7-tetrahydrobenzofuran with different primary amines gives the corresponding tetrahydroindoles in few minutes. All attempts to use microwave dielectric heating to reduce the time required for preparation of 4-oxo-4,5,6,7-tetrahydrobenzofuran, starting from 1,3-cyclohexandione were on the other hand unsuccessful, demonstrating that in some cases, long time conventional heating may be superior to microwaves.     

Microwave-assisted organic synthesis of 3-substituted-imidazo[1,5-a]pyridines

3-Substituted-imidazo[1,5-a]pyridines were conveniently synthesized in two steps from commercially available picolinic esters under microwave irradiation conditions.     

Microwave-assisted synthesis of metalloporphyrazines

The synthesis of metalloporphyrazines with enhanced yields directly from substituted maleonitriles is described. The one-step procedure involves tetramerization using hexamethyldisilazane, p-toluenesulfonic acid and DMF in a sealed tube under microwave irradiation. The reaction time has been drastically reduced from 24 h by classical oil-bath heating to just 15 min.     

An amphiphilic polymer for the synthesis of diverse polymer libraries exemplified using conjugates with lower critical solution temperatures that span water's liquid state

The discovery of new polymer functions is intrinsically tied to the synthesis of diverse structures. Herein we report the synthesis of a new polymer library precursor, poly[N-(12-carboxyl-3,6,9-trioxado) methacrylamide] (pCTMAAm), that is functionalizable with hydrophilic or hydrophobic ligands in both protic and aprotic solvents. The polymer is made through RAFT polymerization with narrow dispersities. Carboxylic acid groups terminate the pCTMAAm side chains, which allows conjugation of both hydrophobic and hydrophilic groups. As a demonstration, three very different ligands, agmantine (cation), galactosamine (polyol) and hexylamine (hydrophobic), were conjugated to pCTMAAm using DMTTM as a condensing agent with greater than 80% conjugation efficiency. To demonstrate the potential utility of the amphiphilic polymer, a polymer library containing side chains with a series of alkanes and varying degrees of substitution was synthesized showing lower critical solution temperature (LCST) profiles that span a temperature range of 7 °C to above 90 °C in water. Multivariate linear regression analysis of the polymer library was used to understand how polymer composition correlates to LCST, using molecular weight, alkane length and degree of substitution as continuous variables. The outcome showed that alkane length has the greatest influence on LCST and that LCST can be estimated using these material composition inputs.