Heat-induced and light-induced isomerization of the xanthophyll pigment zeaxanthin

Zeaxanthin is a xanthophyll pigment that plays important physiological functions both in the plant and in the animal kingdom. All-trans is a stereochemical conformation of zeaxanthin reported as specific for the thylakoid membranes of the photosynthetic apparatus and the retina of an eye. On the other hand, the pigment is subjected, in natural environment, to the conditions that promote stereochemical isomerization, such as illumination and elevated temperature. In the present work, the light-induced and heat-induced (the temperature range 35-95 degrees C) isomerization of all-trans zeaxanthin in organic solvent environment has been analyzed by means of the HPLC technique. The 13-cis conformation has been identified as a major one among the isomerization products. The activation energy of the all-trans to 13-cis isomerization has been determined as 83 +/- 4 kJ/mol and the activation energy of the back reaction as 30 +/- 7 kJ/mol. The reaction of isomerization of the all-trans zeaxanthin at 25 degrees C was substantially more efficient upon illumination. Four different wavelengths of light have been selected for photo-isomerization experiments: 450, 540, 580 and 670 nm, corresponding to the electronic transitions of zeaxanthin from the ground state to the singlet excited states: 1(1)Bu+,3(1)Ag-,1(1)Bu- and 2(1)Ag-, respectively. The quantum efficiency of the all-trans zeaxanthin isomerization induced by light at different wavelengths: 450, 540, 580 and 670 nm was found to differ considerably and was in the ratio as 1:15:160:29. The sequence of the quantum efficiency values suggests that the carotenoid triplet state 1(3)Bu, populated via the internal conversion from the 1(3)Ag triplet state which is generated by the intersystem crossing from the 1(1)Bu- state may be involved in the light-induced isomerization. A physiological importance of the isomerization of zeaxanthin in the retina of an eye, photosynthetic apparatus and of the pigment active as a blue light photoreceptor in stomata is briefly discussed.     

Ultrafast pump-probe study of the primary photoreaction process in pharaonis halorhodopsin: halide ion dependence and isomerization dynamics

Halorhodopsin is a retinal protein that acts as a light-driven chloride pump in the Haloarchaeal cell membrane. A chloride ion is bound near the retinal chromophore, and light-induced all- trans --> 13- cis isomerization triggers the unidirectional chloride ion pump. We investigated the primary ultrafast dynamics of Natronomonas pharaonis halorhodopsin that contains Cl (-), Br (-), or I (-) ( pHR-Cl (-), pHR-Br (-), or pHR-I (-)) using ultrafast pump-probe spectroscopy with approximately 30 fs time resolution. All of the temporal behaviors of the S n <-- S 1 absorption, ground-state bleaching, K intermediate (13- cis form) absorption, and stimulated emission were observed. In agreement with previous reports, the primary process exhibited three dynamics. The first dynamics corresponds to the population branching process from the Franck-Condon (FC) region to the reactive (S 1 (r)) and nonreactive (S 1 (nr)) S 1 states. With the improved time resolution, it was revealed that the time constant of this branching process (tau 1) is as short as 50 fs. The second dynamics was the isomerization process of the S 1 (r) state to generate the ground-state 13- cis form, and the time constant (tau 2) exhibited significant halide ion dependence (1.4, 1.6, and 2.2 ps for pHR-Cl (-), pHR-Br (-), and pHR-I (-), respectively). The relative quantum yield of the isomerization, which was evaluated from the pump-probe signal after 20 ps, also showed halide ion dependence (1.00, 1.14, and 1.35 for pHR-Cl (-), pHR-Br (-), and pHR-I (-), respectively). It was revealed that the halide ion that accelerates isomerization dynamics provides the lower isomerization yield. This finding suggests that there is an activation barrier along the isomerization coordinate on the S 1 potential energy surface, meaning that the three-state model, which is now accepted for bacteriorhodopsin, is more relevant than the two-state model for the isomerization process of halorhodopsin. We concluded that, with the three-state model, the isomerization rate is controlled by the height of the activation barrier on the S 1 potential energy surface while the overall isomerization yield is determined by the branching ratios at the FC region and the conical intersection. The third dynamics attributable to the internal conversion of the S 1 (nr) state also showed notable halide ion dependence (tau 3 = 4.5, 4.6, and 6.3 ps for pHR-Cl (-), pHR-Br (-), and pHR-I (-)). This suggests that some geometrical change may be involved in the relaxation process of the S 1 (nr) state.     

Mechanism of the interconversions between C- and N-bound transition metal alpha-cyanocarbanions

The first presentation of the intra- and intermolecular mechanisms of the C-N interconversions of transition metal alpha-cyanocarbanions is described. A pair of N- and C-bound isomers of isonitrile complex Ru+Cp(NCCH-SO2Ph)(PPh3)(CN-t-Bu) (1) and RuCp[CH(CN)SO2Ph](PPh3)(CN-t-Bu) (2) was synthesized for the mechanistic studies on the N-to-C isomerizations. Structural characterization by X-ray diffractions of 1 and 2 indicated their typical zwitterionic and alpha-metalated structures. The kinetic studies on the irreversible isomerization of 1 to 2 in benzene-d6 at 333-348 K were carried out using 1H NMR spectroscopy, affording the first-order rate constants k1 and the activation parameters DeltaH = 107 +/- 2 kJ.mol-1 and DeltaS = -22 +/- 5 J.K-1.mol-1. The almost identical values of k1 were obtained upon similar treatment of 1 with 4 equiv of external ligands such as PPh3, CH3CN, and t-BuNC at 333 K, indicating that the N-to-C isomerization proceeds in an intramolecular manner without dissociation of a ligand. As a model system for the C-to-N isomerization, the irreversible transformation of RuCp[CH(CN)SO2Ph](PPh3)2 (3) to Ru+Cp(NCCH-SO2Ph)(PPh3)2 (4) was investigated under various reaction conditions. The reaction of 3 at room temperature in THF affords the coordination dimers (RRu*,SC*,RRu*,SC*)-{RuCp[CH(CN)SO2Ph](PPh3)}2 (5) stereoselectively, and its distorted mu2-C,N-bound structure was determined by X-ray analysis. The reaction profiles for the isomerization of 3 includes the generation- and temperature-dependent decays of dimeric species 5 and its diastereomer 6, which strongly suggests that the intra- and intermolecular pathways are included in the C-to-N isomerization. The intramolecular process of the C-to-N isomerization of 3 has been confirmed by the kinetic studies on the isomerization of 3 with excess amount of PPh3 in benzene-d6 at 333-348 K which afford the first-order kinetics with the activation parameters of DeltaH = 121 +/- 1 kJ.mol-1 and DeltaS = 42 +/- 4 J.K-1.mol-1. Treatment of 5 with PPh3 in boiling benzene gives rise to the quantitative formation of N-bound complex 4. The controlled kinetic experiments on the cleavage of 5 with PPh3 have concluded that the cleavage of 5 with PPh3 proceeds via simultaneous C-Ru and N-Ru bond scissions, indicating the temperature-dependent participation of intermolecular process in the C-to-N isomerization of 3.     

Photoisomerization of arylstilbazolium ligands in the presence of DNA

The ability of the DNA duplex to behave as an efficient organized medium for trans-cis photoisomerization has been explored. The presence of DNA affected isomerization in a variety of ways depending on the aryl moiety properties of the ligand and its DNA-binding mode. Contrary to intercalating ligands, 9-[2-(N-methylpyridinium-4-yl)vinyl]phenanthrene (2) and 9-[2-(N-methylpyridinium-4-yl)vinyl]anthracene (3), which gave only cis and trans isomers, the additional products--cyclobutane photodimers--were detected for 2-[2-(N-methylpyridinium-4-yl)vinyl]naphthalene (1), which binds cooperatively to the minor groove of DNA. Photostationary states (pss) for all ligands were seriously affected by the presence of DNA. A trans isomer-rich pss and restriction of trans --> cis process, observed for ligands 1 and 2, were explained in terms of a different binding affinity of DNA toward particular isomers. On the contrary, 9-anthryl derivative 3 isomerized against the isomer-binding preferences, showing cis isomer-rich pss and enhanced quantum yield of isomerization. The unique behavior of ligand 3-DNA complex was attributed to different isomerization mechanism that consists in quantum chain isomerization from an excited singlet state possessing a charge transfer character. This is the first example of ligand, which undergoes DNA-mediated cis-trans isomerization in the opposite direction than expected from DNA-binding preferences. The analysis of pss data based on two alternative pathways of photoisomerization showed that investigated ligands follow the model that allows isomerization of both free and DNA-bound ligands.     

Ab initio calculations on the isomerization of the 1,3-hexadien-5-yne radical cation to the benzene structure and to nonclassical ion structures

Ab initio calculations at the MRCI//ROHF/6-31G** level show that the barrier for isomerization of the 1,3-hexadien-5-yne radical cation to nonclassical structures with a five-membered ring and an exocyclic CH bond is about 15 kcal mol^?1. The barrier for a subsequent isomerization to the benzene structure is calculated to be slightly higher.     

Tautomerization of α,β-and β,γ-unsaturated phosphonium salts resulting from the reaction of triphenylphosphine with β-bromomethacrylic acid. Nucleophilic addition at the γ position of the allyl group in phosphonium salt

Temperature factor was found to be determining in the isomerization of 2-carboxyprop-1-en-1-yl-and 2-carboxyprop-2-en-1-yl(triphenyl)phosphonium bromides. Elevated temperature favors formation of isomer with the double bond in the β,γ position with respect to the phosphonium group. Alkaline hydrolysis at room temperature promotes the reverse isomerization. The isomerization of 2-carboxyprop-1-en-1-yl(triphenyl)phosphonium bromide is hampered by addition of hydrobromic acid, as well as by carrying out its synthesis in the presence of aqueous HBr. Alkaline hydrolysis of 2-carboxyprop-1-enyl(triphenyl)phosphonium bromide and (E)-(2-carboxyvinyl)triphenylphosphonium chloride is accompanied by phenyl group migration to the α-position with formation of 2-methyl-3-(diphenylphosphoryl)-3-phenylpropionic acid and 3-(diphenyl-phosphoryl)-3-phenylpropionic acid, respectively. The possibility for nucleophilic addition at the γ position of the allyl group in 2-carboxyprop-2-enyl(triphenyl)phosphonium bromide was demonstrated using the reaction with triphenylphosphine as an example.     

Theoretical and experimental investigation of the energetics of cis-trans proline isomerization in peptide models

The energetics of cis-trans proline isomerization in small peptide models have been investigated using the hybrid density functional theory method B3LYP with a 6-31+G* basis set. The molecules studied are models for the phospho-Ser/Thr-Pro substrate for Pin-1, a peptidyl-prolyl isomerase (PPIase) involved in cell division. Pin-1 requires phosphorylation of a Ser or Thr residue adjacent to a Pro residue in the substrate and catalyzes cis-trans isomerization about the proline amide bond. The dihedral angle that would correspond to the reaction coordinate for isomerization of the omega peptide bond was investigated for several small models. Relaxed potential energy scans for this dihedral angle in N-methylacetamide, 1, N,N-dimethylacetamide, 2, acetylpyrrolidine, 3 and acetylproline, 4, were carried out in 20 degrees steps using the B3LYP/6-31+G* level of theory. In addition, similar scans were carried out for 1-4 protonated on the acetylamide carbonyl oxygen. Optimized structures for 1-4 protonated on the amide nitrogen were also obtained at B3LYP/6-31+G*. Relative proton affinities were determined for each site at various angles along the reaction coordinate for isomerization. The relative proton affinities were anchored to experimental gas phase proton affinities, which were taken from the literature for 1 and 2, or determined in an electrospray ionization-quadrupole ion trap instrument using the extended kinetic method for 3 and 4. Proton affinities of 925 +/- 10 and 911 +/- 12 kJ/mol were determined for 3 and 4, respectively. These studies suggest that the nitrogen atom in these amides becomes the most basic site in the molecule at a dihedral angle of ca. 130 degrees . In addition, the nitrogen atoms in 2-4 are predicted to attain basicities in the range 920-950 kJ/mol, making them basic enough to be the preferred site for hydrogen bonding in the Pin-1 active site, in support of the proposed mechanism for PPIases.     

Direct measurement of the energy thresholds to conformational isomerization. II. 3-indole-propionic acid and its water-containing complex

The methods of stimulated emission pumping-hole-filling spectroscopy (SEP-HFS) and population transfer spectroscopy (SEP-PTS) were used to place direct experimental bounds on the energetic barriers to conformational isomerization in 3-indole-propionic acid (IPA) and its water-containing complex. By contrast with tryptamine (Paper I), IPA has only two conformations with significant population in them. The structures of the two conformers are known from previous work [P. M. Felker, J. Phys. Chem. 96, 7844 (1992)]. The energy thresholds for A-->B and B-->A isomerizations are placed at 854 and 754 cm(-1), respectively. Lower bounds on the isomerization barrier in the two directions are determined from the last transition not observed in the SEP-PT spectra. These are placed at 800 and 644 cm(-1) for A-->B and B-->A, respectively. The combined results place bounds on the relative energies of the A and B minima, with E(B)-E(A)=46-210 cm(-1). Like the IPA monomer, the IPA-H2O complex forms two conformational isomers. Both these isomers incorporate the water molecule as a bridge between the carbonyl and OH groups of the carboxylic acid. Previous rotational coherence measurements (L. L. Connell, Ph.D. thesis, UCLA, 1991) have determined that these complexes retain the same IPA conformational structure as the monomers. SEP-PTS and SEP-HFS were carried out on the IPA-H2O complexes. It was demonstrated that it is possible to use SEP to drive conformational isomerization between the two conformational isomers of IPA-H2O. Bounds on the energy barriers to conformational isomerization are not effected greatly by the presence of the water molecule, with Ebarrier(A-->B)=771-830 cm(-1) and Ebarrier(B-->A)=583-750 cm(-1). This is a simple consequence of the fact that the barrier is an intramolecular barrier, and the water molecule is held fixed in the COOH pocket, where it interacts with the ring only peripherally during the isomerization process. Finally, changes in the SEP-PT spectral intensity in transitions near the top of the barrier to isomerization as a function of the position of SEP excitation relative to the pulsed valve exit provide some insight to the competition between vibrational relaxation and isomerization in a molecule the size of IPA.     

Determination of the cis-trans isomerization barrier of several L-peptidyl-L-proline dipeptides by dynamic capillary electrophoresis and computer simulation

Dynamic capillary electrophoresis (DCE) and computer simulation of the elution profiles with the theoretical plate and the stochastic model has been applied to determine the isomerization barriers of the three dipeptides L-alanyl-L-proline, L-leucyl-L-proline, and L-phenylalanyl-L-proline. The separation of the rotational cis-trans isomers has been performed in an aqueous 70 mM borate buffer at pH 9.5. Interconversion profiles featuring plateau formation and peak broadening were observed. To determine the rate constants k1 and k(-1) of the cis-trans isomerization in dynamic capillary electrophoresis, equations have been derived for the theoretical plate model and stochastic model. The electropherograms were simulated with the ChromWin software which uses the experimental data plateau height h(plateau), peak width at half height Wh, the total migration times of the cis-trans isomers tR and the electroosmotic break-through time t0 as well as the peak ratio [cis]/[trans]. From temperature-dependent measurements, the rate constants k1 and k(-1) and the kinetic activation parameters deltaG#, deltaH# and deltaS# of the cis-trans isomerization of the three dipeptides were obtained.     

Direct measurement of the energy thresholds to conformational isomerization in tryptamine: experiment and theory

The methods of stimulated emission pumping-hole filling spectroscopy (SEP-HFS) and stimulated emission pumping population transfer spectroscopy (SEP-PTS) were applied to the conformation-specific study of conformational isomerization in tryptamine [TRA, 3-(2-aminoethyl)indole]. These experimental methods employ stimulated emission pumping to selectively excite a fraction of the population of a single conformation of TRA to well-defined ground-state vibrational levels. This produces single conformations with well-defined internal energy, tunable over a range of energies from near the zero-point level to well above the lowest barriers to conformational isomerization. When the SEP step overcomes a barrier to isomerization, a fraction of the excited population isomerizes to form that product. By carrying out SEP excitation early in a supersonic expansion, these product molecules are subsequently cooled to their zero-point vibrational levels, where they can be detected downstream with a third tunable laser that probes the ground-state population of a particular product conformer via a unique ultraviolet transition using laser-induced fluorescence. The population transfer spectra (recorded by tuning the SEP dump laser while holding the pump and probe lasers fixed) exhibit sharp onsets that directly determine the energy thresholds for conformational isomerization in a given reactant-product conformer pair. In the absence of tunneling effects, the first observed transition in a given X-Y PTS constitutes an upper bound to the energy barrier to conformational isomerization, while the last transition not observed constitutes a lower bound. The bounds for isomerizing conformer A of tryptamine to B(688-748 cm(-1)), C(1)(860-1000 cm(-1)), C(2)(1219-1316 cm(-1)), D(1219-1282 cm(-1)), E(1219-1316 cm(-1)), and F(688-748 cm(-1)) are determined. In addition, thresholds for isomerizing from B to A(<1562 cm(-1)), B to F(562-688 cm(-1)), and out of C(2) to B(<747 cm(-1)) are also determined. The A-->B and B-->A transitions are used to place bounds on the relative energies of minima B relative to A, with B lying at least 126 cm(-1) above A. The corresponding barriers have been computed using both density functional and second-order many-body perturbation theory methods in order to establish the level of theory needed to reproduce experimental results. While most of the computed barriers match experiment well, the barriers for the A-F and B-F transitions are too high by almost a factor of 2. Possible reasons for this discrepancy are discussed.     

Theoretical studies on the butene double bond isomerization catalyzed by 5-H of 1-ethyl-3-methyl-imidazolium fluoride

The isomerization of 1-butene to trans-2-butene catalyzed by 5-H proton of 1-ethyl-3-methyl-imidazolium fluoride (EMImF) has been studied with density functional theory of quantum chemistry. The equilibrium states geometries and transition state geometry are optimized at the levels of B3LYP/6-31G(d,p) and B3LYP/6-311++G(d,p), respectively. The apparent activation barrier of isomerization is about 208 kJ/mol theoretically. It indicates that the 5-H proton on the imidazole ring of EMImF has certain catalytic activity to the butene double bond isomerization, which is similar to that of the 4-H proton. According to the data of intrinsic coordinate path, it can be determined that the isomerization is an elementary course and the hydrogen exchange of butene with EMImF is synergetic.     

Flexing the muscles of m-divinylbenzene: direct measurement of the barriers to conformational isomerization

The energy thresholds to isomerization of the three conformational isomers of m-divinylbenzene (cis-cis, cis-trans, and trans-trans) were directly measured by stimulated emission pumping-population transfer (SEP-PT) spectroscopy. The experimentally determined isomerization thresholds are Ethresh(cc --> ct, tt) = 1080-1232 cm(-1), Ethresh(tt --> ct, cc) = 1130-1175 cm(-1), Ethresh(ct --> cc) = 997-1175 cm(-1), and Ethresh(ct --> tt) = 997-1232 cm(-1). On the basis of the threshold values for X --> Y and Y --> X isomerization, the relative energies of the conformational isomers are -102 < or = E(ct) < or = +178 cm(-1) and -102 < or = E(cc) < or = +95 cm(-1) relative to E(tt) = 0. UV-hole-filling (UVHF) spectroscopy was also used to determine the effect of population returning to the ground state via fluorescence. A full set of governing equations for SEP-PT and UVHF spectroscopy is reported that will be generally useful for future studies using these methods. By comparison of these results with the computed stationary points on a calculated surface (DFT B3LYP/6-31+G*), the isomerization pathway was determined to involve sequential isomerization of each vinyl group rather than concerted motion. The energy thresholds were also combined with the ground state torsional vibrational energy levels to obtain a new fitted two-dimensional torsional potential for mDVB.     

Nonradiative decay dynamics of methyl-4-hydroxycinnamate and its hydrated complex revealed by picosecond pump-probe spectroscopy

The lifetimes of methyl 4-hydroxycinnamate (OMpCA) and its mono-hydrated complex (OMpCA-H(2)O) in the S(1) state have been measured by picosecond pump-probe spectroscopy in a supersonic beam. For OMpCA, the lifetime of the S(1)-S(0) origin is 8-9 ps. On the other hand, the lifetime of the OMpCA-H(2)O complex at the origin is 930 ps, which is ～100 times longer than that of OMpCA. Furthermore, in the complex the S(1) lifetime shows rapid decrease at an energy of ～200 cm(-1) above the origin and finally becomes as short as 9 ps at ～500 cm(-1). Theoretical calculations with a symmetry-adapted cluster-configuration interaction (SAC-CI) method suggest that the observed lifetime behavior of the two species is described by nonradiative decay dynamics involving trans → cis isomerization. That is both OMpCA and OMpCA-H(2)O in the S(1) state decay due to the trans → cis isomerization, and the large difference of the lifetimes between them is due to the difference of the isomerization potential energy curve. In OMpCA, the trans → cis isomerization occurs smoothly without a barrier on the S(1) surface, while in the OMpCA-H(2)O complex, there exists a barrier along the isomerization coordinate. The calculated barrier height of OMpCA-H(2)O is in good agreement with that observed experimentally.     

Mechanism of the rhodium-catalyzed asymmetric isomerization of allylamines to enamines

A theoretical study of the mechanism of the rhodium-catalyzed asymmetric isomerization of allylamines to enamines by using density functional theory with the B3LYP functional leads us to discard the so far accepted nitrogen-triggered mechanism, in which the isomerization occurs on N-bonded intermediates and transition states, in favor of a variation of the classical allylic mechanism for olefin isomerization. The modified allylic mechanism consists of four main steps: 1) N-coordination of the allylamine to Rh(I); 2) intramolecular isomerization from kappa(1)-(N)-coordination to eta(2)-(C,C)-coordination of the allylamine; 3) oxidative addition of C(1)--H to form a distorted octahedral eta(3)-allyl complex of Rh(III); and 4) hydrogen transfer to C(3) (reductive C(3)--H elimination). The two hydrogen transfer steps (oxidative addition and reductive elimination) have the highest barriers of the overall process. The oxidative addition barrier, which includes solvent effects, is 28.4 kcal mol(-1). For the reductive elimination, the value in solvent is 28.6 kcal mol(-1), very similar to the oxidative addition barrier.     

O,O-二烷基硫代磷(膦)酸酯与三氯氧磷的异构化/氯化反应机理初探

O,O－二烷基硫代磷(膦)酸酯(1)与三氯氧磷作用得到S-烷基硫代磷酰氯(2)和O-烷基磷酰二氯(3),此反应包含异构化和氧化两个过程.实验结果表明,1的预期氯化产物O-烷基硫代磷(膦)酰氯酯(5)与三氯氧磷不发生反应,而1的预期异构化产物O,S-二烷基硫代磷(膦)酸酯(6)与三氯氧磷能顺利反应得到2.由此推测,在1的异构化/氯化反应中,异构化很可能发生在氯化之前.根据此结果和三角双锥中间体(TBP)概念,提出了该反应初步的可能机理.     

Electronic spectroscopy and photoisomerization of trans-urocanic acid in a supersonic jet.

trans-Urocanic acid (trans-UA), a component of the epidermal layer of skin, exhibits wavelength-dependent photochemistry. The quantum efficiency of isomerization to cis-UA is greatest when the molecule is excited on the long wavelength tail of its absorption profile in solution (300-320 nm). However, exciting the molecule where it absorbs UV light most efficiently (260-285 nm) causes almost no isomerization. We have used fluorescence excitation and dispersed emission methods in a supersonic jet to investigate the electronic states involved in this complex and interesting photochemistry. Three distinct regions are present in the excitation spectrum. Region I, which is below the isomerization barrier, contains sharp, well-resolved peaks that upon excitation emit from the S(1) state of trans-UA. Region II exhibits peaks that increase in broadness and decrease in intensity with increasing excitation energy. Upon excitation these peaks produce dual emission from the S(1) states of both trans- and cis-UA. The trans to cis isomerization barrier is estimated to be 1400 cm(-1). Region III exhibits excitation to the S(2) electronic state and has a broad structure that spans 3000 cm(-1) and occurs 4000 cm(-1) above S(1). S(2) excitation results in essentially no trans to cis isomerization.     

Isomerization kinetics of panipenem in aqueous solution

The isomerization kinetics of panipenem (INN: (+)-(5R,6S)-3-[(S)-1-(acetimidoylpyrrolidin-3-yl)thio]-6-[(R)-hydroxyethyl]-7-oxo-1-azabicyclo[3.2.0]hept-2-ene-2-carboxylic acid, CAS No. 87726-17-8) in aqueous solution were investigated. An equilibrium between the Z-form and E-form was observed, and it was found that the isomerization rates were affected by the pH of the solution. Under acidic conditions, the isomerization rates were small. However, the isomerization rates were increased with the pH value. This phenomenon resulted from the extent of proton dissociation from the acetimidoyl group.     

Photoisomerization dynamics of N-1-methyl-2-(tolylazo) imidazole and the effect of complexation with Cu(ii)

Azo-compounds containing an imidazole moiety have the potential to photoregulate biofunctions, such as gene-expression and enzymatic action. Photoinduced isomerization of the azo-backbone is the vital process for such applications, but the photoisomerization dynamics of azo-imidazole compounds has not been well explored. We investigated the photoisomerization dynamics of trans-N-1-methyl-2-(tolylazo) imidazole (trans-MTAI) using femtosecond transient absorption spectroscopy following photoexcitation to the S(2) state. Time evolution of the transient electronic spectra and the global analysis of the temporal profiles reveal a three state relaxation (S(2) → S(1) → S(0)) process in different kinds of solvents. The lifetime of the S(2) state is independent of the viscosity of solvent, whereas that of the S(1) state becomes longer with increasing solvent viscosity. This observation clearly indicates that the large amplitude motion that leads to the trans → cis isomerization occurs only in the S(1) state and relaxation of the S(2) state is not associated with the isomerization process. We have also investigated the excited state dynamics of [Cu(trans-MTAI)(2)]Cl(2) to examine the effect of complexation with the metal ion on the isomerization dynamics of trans-MTAI. It is observed that the photoinduced isomerization of the azo-backbone in trans-MTAI is completely inhibited upon complexation with Cu(ii).     

One-electron reduction of methanesulfonyl chloride. The fate of MeSO2Cl(.)(-) and MeSO2(.) intermediates in oxygenated solutions and their role in the cis-trans isomerization of mono-unsaturated fatty acids

The one-electron reduction of methanesulfonyl chloride (MeSO2Cl) leads, in the first instance, to an electron adduct MeSO2Cl(.)(-) which lives long enough for direct detection and decays into sulfonyl radicals MeSO2(.) and Cl(-), with k = 1.5 x 10(6) s(-1). Both, MeSO2Cl(.)(-) and MeSO2(.) showed a similar absorption in the UV with lambdamax of 320 nm. In the presence of oxygen, MeSO2Cl(.)(-) transfers an electron to O(2) and establishes an equilibrium with superoxide. The rate constant for the forward reaction was measured to 4.1 x 10(9) M(-1) s(-1), while for the back reaction only an interval of 1.7 x 10(5) to 1.7 x 10(6) M(-1) s(-1) could be estimated, with a somewhat higher degree of confidence for the lower value. This corresponds to an equilibrium constant in the range of 2.4 x 10(3) to 2.4 x 10(4). With reference to E degrees (O2/O2(.)(-)) = -155 mV, the redox potential of the sulfonyl chloride couple, E degrees (MeSO2Cl/MeSO2Cl(.)(-)), thus results between being equal to -355 and -414 mV (vs NHE). MeSO2Cl(.)(-) reduces (besides O2) 4-nitroacetophenone. The underlying electron transfer took place with k = 1.5 x 10(9) M(-1) s(-1), corroborating an E degrees for the sulfonyl chloride couple significantly exceeding the above listed lower value. The MeSO2(.) radical added to oxygen with a rate constant of 1.1 x 10(9) M(-1) s(-1). Re-dissociation of O2 from MeSO2OO(.) occurred only very slowly, if at all, that is, with k < 10(5) s(-1). MeSO2(.) radicals can act as the catalyst for the cis-trans isomerization of several Z- and E-mono-unsaturated fatty acid methyl esters in homogeneous solution. The effectiveness of the isomerization processes has been addressed, and in the presence of oxygen the isomerization is completely suppressed.     

Photophysical studies of the trans to cis isomerization of the push-pull molecule: 1-(pyridin-4-yl)-2-(N-methylpyrrol-2-yl)ethene (mepepy)

Organic molecules possessing intramolecular charge-transfer properties (D-pi-A type molecules) are of key interest particularly in the development of new optoelectronic materials as well as photoinduced magnetism. One such class of D-pi-A molecules that is of particular interest contains photoswitchable intramolecular charge-transfer states via a photoisomerizable pi-system linking the donor and acceptor groups. Here we report the photophysical and electronic properties of the trans to cis isomerization of 1-(pyridin-4-yl)-2-(N-methylpyrrol-2-yl)ethene ligand (mepepy) in aqueous solution using photoacoustic calorimetry (PAC) and theoretical methods. Density functional theory (DFT) calculations demonstrate a global energy difference between cis and trans isomers of mepepy to be 8 kcal mol(-1), while a slightly lower energy is observed between the local minima for the trans and cis isomers (7 kcal mol(-1)). Interestingly, the trans isomer appears to exhibit two ground-state minima separated by an energy barrier of approximately 9 kcal mol(-1). Results from the PAC studies indicate that the trans to cis isomerization results in a negligible volume change (0.9 +/- 0.4 mL mol(-1)) and an enthalpy change of 18 +/- 3 kcal mol(-1). The fact that the acoustic waves associated with the trans to cis transition of mepepy overlap in frequency with those of a calorimetric reference implies that the conformational transition occurs faster than the approximately 50 ns response time of the acoustic detector. Comparison of the experimental results with theoretical studies provide evidence for a mechanism in which the trans to cis isomerization of mepepy results in the loss of a hydrogen bond between a water molecule and the pyridine ring of mepepy.