Tuning porphyrin/DNA supramolecular assemblies by competitive binding

Addition of an intercalating but nonaggregating porphyrin, AuT4, to a preformed adduct between DNA and a strongly aggregating porphyrin, t-H2Pagg, permits control of the extent of aggregation of the latter. The size and the intensity of the ICD and RLS signals depend linearly on the concentration of the intercalating dye and decrease markedly on increasing the concentration of the available binding sites on the biopolymer template.     

Template-assisted control of porphyrin aggregation by ladder-type supramolecular assemblies

A new strategy to control the orientation and aggregation numbers of porphyrins by alignment along well-defined templates has been demonstrated. Porphyrin-bridged bisPYBOX ligands were arranged along the oligomeric secondary dialkylammonium cations as templates to form well-defined supramolecular complexes. The templates controlled the aggregations of the porphyrins.     

Water-soluble supramolecular porphyrin dimer: self-organization of mono(imidazolyl)-substituted Zn porphyrin to a special-pair type dimer in water

Tris(4-carboxylphenyl)-mono(N-methylimidazolyl)-substituted Zn porphyrin was synthesized as a precursor for a water-soluble supramolecular porphyrin dimer. The dimer formation was performed in a NaHCO₃ aq solution (pH 8.4) and phosphate buffer solutions (pH 7.4-9.0). The split Soret bands of Zn porphyrin observed in the absorption spectra clearly showed self-organization to a special-pair type slipped cofacial dimer via metal coordination of imidazole even in water.     

Rational design of supramolecular chirality in porphyrin assemblies: the halogen bond case

Asymmetric functionalization of the tetraarylporphyrin scaffold, combined with directional supramolecular halogen bonding, yields chiral architectures.     

A supramolecular photosynthetic triad of slipped cofacial porphyrin dimer, ferrocene, and fullerene

A supramolecular triad consisting of self-assembled imidazolyl-zinc-porphyrin dimer, ferrocene, and fullerene was successfully constructed, resulting in long-lived charge separated species after efficient photoinduced electron transfer and charge shift reactions.     

Core-modified porphyrin based assemblies

Core-modified porphyrins, resulting from the replacement of one or two pyrrolic nitrogens with other hetero atoms such as O, S, Se, and Te possess very interesting and distinct properties compared to tetrapyrrolic porphyrins. Specially, the singlet state energy levels can be fine tuned with suitable modification of porphyrin core by substituting pyrrolic “N” with hetero atoms such as “O” and “S”. In this review, we discuss the synthesis of various core-modified porphyrin building blocks containing one, two, three and four functional groups by following various synthetic methodologies developed in the past decade and the use of these core-modified porphyrin building blocks in the construction of several covalently and non-covalently linked hetero porphyrin dyads, triads, tetrads and pentads containing one or more different types of porphyrin sub-units. The photophysical studies are also described to show the possibility of singlet–singlet energy transfer from one porphyrin sub-unit to another in these hetero porphyrin arrays.     

Light-harvesting heptadecameric porphyrin assemblies

New porphyrin assemblies containing 17 porphyrin molecules are constructed by using free base TPP-type porphyrins having eight pyrazine moieties 1. Spectroscopic titration of dimeric [meso-tetrakis(2-carboxy-4-nonylphenyl)porphyrinato]zinc(II) 2 with these porphyrins shows that the processes of the formation of the heptadecameric porphyrin assemblies may be analyzed as eight independent equilibrium processes with an identical binding constant. All binding constants are larger than 5 x 107 M-1 which is the determinable upper limit of the present titration method. In all cases, the fluorescence spectrum of the 1:8 mixture of 1 and 2 consists of the major fluorescence of 1 and the minor one of 2.pyrazine complex even in the presence of the large excess of the antenna pigments. The observed spectra are well reconstructed by the form of faF1 + fbF2, where F1 and F2 are the fluorescence of 1 and the 2.pyrazine complex measured separately at the corresponding concentrations. Interestingly, the general trend that values of fa are nearly equal to those of r564 x (1 - fb) in all cases is found, where r564 is the absorption ratios of the 2.pyrazine moiety and the central free base porphyrin in the assemblies at 564 nm. The observation indicates the excitation of the central porphyrin is directly enhanced by the absorption of the antenna pigments even in such large scale assemblies. Thus, the antenna effect for 1 having largest r564 results in 77 times fluorescence enhancement of the central free base porphyrin. The systems also show interesting dependency of energy-transfer efficiencies on the topological arrangement of the antenna elements.     

Multiple photosynthetic reaction centres composed of supramolecular assemblies of zinc porphyrin dendrimers with a fullerene acceptor

Multiple photosynthetic reaction centres have successfully been constructed using supramolecular complexes of zinc porphyrin dendrimers [D(ZnP)(n): n = 4, 8, 16] with fulleropyrrolidine bearing a pyridine ligand (C(60)py). Efficient energy migration occurs completely between the ZnP units of dendrimers prior to the electron transfer with increasing the generation of dendrimers to attain an extremely long charge-separation lifetime.     

Porphyrin-phthalocyanine/pyridylfullerene supramolecular assemblies

The synthesis and photophysical properties of several porphyrin (P)-phthalocyanine (Pc) conjugates (P-Pc; 1-3) are described, in which the phthalocyanines are directly linked to the β-pyrrolic position of a meso-tetraphenylporphyrin. Photoinduced energy- and electron-transfer processes were studied through the preparation of H(2)P-ZnPc, ZnP-ZnPc, and PdP-ZnPc conjugates, and their assembly through metal coordination with two different pyridylfulleropyrrolidines (4 and 5). The resulting electron-donor-acceptor hybrids, which were formed by axial coordination of compounds 4 and 5 with the corresponding phthalocyanines, mimicked the fundamental processes of photosynthesis; that is, light harvesting, the transduction of excited-state energy, and unidirectional electron transfer. In particular, photophysical studies confirmed that intramolecular energy-transfer resulted from the S(2) excited state as well as from the S(1) excited state of the porphyrins to the energetically lower-lying phthalocyanines, followed by an intramolecular charge-transfer to yield P-Pc(.+)?C(60)(.-). This unique sequence of processes opens the way for solar-energy-conversion processes.     

Influence of supramolecular organization on energy transfer properties in chiral oligo(p-phenylene vinylene) porphyrin assemblies

A comparative study on oligo(p-phenylene vinylene) (OPV)-appended porphyrins containing all trans-vinylene (either hydrophilic or lipophilic) or amide linkages (lipophilic) is presented. The type of supramolecular arrangement obtained in organic solvents proves to be strongly dependent on the nature of the covalent connection. In the case of all trans-vinylene linkages, a J-type intermolecular packing is obtained and the assemblies are only of moderate stability. Conversely, the supramolecular structures obtained from the amide-linked system display an H-type stacking arrangement of enhanced stability and chirality as a consequence of intermolecular hydrogen bonding along the stack direction, favorably interlocking the stacked building blocks. Interestingly, the observed differences in stability and organization are qualitatively illustrated by monitoring the sequential energy transfer process in both types of assemblies. Efficient intramolecular energy transfer from the OPVs (donors) to the respective porphyrin cores is followed by energy transfer from Zn-porphyrin (donor) to free-base porphyrin (acceptor) in both systems. However, the improved intermolecular organization for the amide-linked system increases the energy transfer efficiency along the stack direction. In addition, the water-soluble (OPV)-appended porphyrin system forms highly stable assemblies in an aqueous environment. Nevertheless, the poor energy transfer efficiency along the stack direction reveals a relative lack of organization in these assemblies.     

A panchromatic pyrazine-fused porphyrin dimer

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Diarylurea-linked zinc porphyrin dimer as a dual-mode artificial receptor: supramolecular control of complexation-facilitated photoinduced electron transfer

A novel porphyrinic receptor 1 in which two zinc porphyrins are bridged by two diarylurea linkers was developed for recognition of a viologen derivative (hexyl viologen, HV). The electronic absorption spectra as well as the 1H NMR experiments revealed that the HV molecule was bound to the cleft in 1 mainly through carbonyl dipole-charge interactions to afford a 1:1 complex. From the steady-state fluorescence spectroscopic study, the photoinduced electron transfer (PET) from 1 to HV was extremely facilitated by the receptor-substrate complexation. The receptor 1 also formed a 1:1 complex with 1,4-diazabicyclo[2.2.2]octane (DABCO) through two Zn-N coordination interactions, and, using DABCO as an inhibitor, we suppressed the PET reaction via the substrate exchange.     

Dendritic supramolecular assemblies for drug delivery

Dendritic supramolecular assemblies were formed in water with Reichardt's dye or the anticancer drug 10-hydroxycamptothecin and the dendritic macromolecule, ([G4]-PGLSA-OH)2-PEG3400.     

Stimuli-responsive supramolecular assemblies of linear-dendritic copolymers

With the goal of developing a pH-responsive micelle system, linear-dendritic block copolymers comprising poly(ethylene oxide) and either a polylysine or polyester dendron were prepared and hydrophobic groups were attached to the dendrimer periphery by highly acid-sensitive cyclic acetals. These copolymers were designed to form stable micelles in aqueous solution at neutral pH but to disintegrate into unimers at mildly acidic pH following loss of the hydrophobic groups upon acetal hydrolysis. Micelle formation was demonstrated by encapsulation of the fluorescent probe Nile Red, and the micelle sizes were determined by dynamic light scattering. The structure of the dendrimer block, its generation, and the synthetic method for linking the acetal groups to its periphery all had an influence on the critical micelle concentration and the micelle size. The rate of hydrolysis of the acetals at the micelle core was measured for each system at pH 7.4 and pH 5, and it was found that all systems were stable at neutral pH but underwent significant hydrolysis at pH 5 over several hours. The rate of hydrolysis at pH 5 was dependent on the structure of the copolymer, most notably the hydrophobicity of the core-forming block. To demonstrate the potential of these systems for controlled release, the release of Nile Red as a "model payload" was examined. At pH 7.4, the fluorescence of micelle-encapsulated Nile Red was relatively constant, indicating it was retained in the micelle, while at pH 5, the fluorescence decreased, consistent with its release into the aqueous environment. The rate of release was strongly correlated with the rate of acetal hydrolysis and was therefore controlled by the chemical structure of the copolymer. The mechanism of Nile Red release was investigated by monitoring the change in size of the micelles over time at acidic pH. Dynamic light scattering measurement showed a size decrease over time, eventually reaching the size of a unimer, thus providing evidence for the proposed micelle disintegration.     

Addressing metal centres in supramolecular assemblies

Supramolecular metal ion assemblies are deposited from their solutions onto highly orientated pyrolytic graphite (HOPG) substrates to be imaged by scanning tunnelling microscopy (STM). Since the structural and electronic information of STM measurements are strongly entangled, the spectroscopic interpretation and analysis of the images of such molecular assemblies has proven to be challenging. This tutorial review focuses on a general room temperature scanning tunnelling spectroscopy (STS) protocol, current induced tunnelling spectroscopy (CITS), applied to free-standing 1D and 2D arrangements of supramolecular metal ion assemblies rendering local tunnelling probabilities with submolecular resolution. The size of the investigated molecular assemblies was confirmed by comparison with X-ray crystallographic data, while the consistency of the spectroscopic investigations and of the determined positions of the metal ions within the assemblies was checked by DFT calculations. Due to the genuine level structure of coordinated metal centers, it was possible to map exclusively the position of the coordination bonds in supramolecular transition metal assemblies with submolecular spatial resolution using the CITS technique. CITS might thus constitute an important tool to achieve directed bottom-up construction and controlled manipulation of fully electronically functional, two-dimensional molecular designs.     

Supramolecular assemblies between macrocyclic porphyrin hexamers and star-shaped porphyrin arrays.

The syntheses of eight new star-shaped D(3)-symmetric arrays in which three 15-(pyrid-4-yl)porphyrin subunits are attached to the 1, 3, and 5 positions of a benzene core through linkers consisting of collinear repetitive phenylethynyl units have been carried out using Pd(0)-catalyzed coupling reactions. By the same procedure, an analogous 10-(4-pyridin-yl)porphyrin hexamer in which all positions of the benzene core are substituted has been obtained. Likewise, the preparation of suitably sized cyclic porphyrin hexamers, in which all six or at least three alternate porphyrin rings are complexed with Zn(II) ions, is described in detail. In solution, such cyclic porphyrin hexamers form supramolecular assemblies with the star-shaped polyporphyrins in which the latter are held in the interior of the macrocycle through coordination of the apical pyridine rings with the Zn(II) ions. The suggested structures are supported by (1)H NMR spectroscopic and MALDI-TOF mass spectrometric measurements. They agree with the high values of the binding constants of the corresponding supramolecules, which range between K = 1.1 x 10(10) and 1.4 x10(9) M(-1).     

Directional exciton transport in supramolecular nanostructured assemblies

Supramolecular nanostructured host-guest compounds provide an intriguing strategy for improved materials in optoelectronic devices. Here, conjugated organic guest molecules are embedded in channel-forming organic or inorganic hosts, like perhydrotriphenylene (PHTP) and zeolites, leading to weakly coupled, highly ordered, and brightly emissive materials. In-depth material characterization allows for a full understanding of the exciton transport mechanism in the weak coupling regime through steady-state time-resolved fluorescence studies combined with quantum-chemical based Monte-Carlo simulations without adjustable parameters. Despite weak chromophore coupling and dilution by the host, the exciton diffusion length exceeds 50 nm similar to molecular crystals, and might be tuned to the μm range by the proper choice of host and guest materials.