Cyclic pentapeptides (e.g. Ac‐(cyclo‐1,5)‐[KAXAD]‐NH2; X=Ala, 1 ; Arg, 2 ) in water adopt one α‐helical turn defined by three hydrogen bonds. NMR structure analysis reveals a slight distortion from α‐helicity at the C‐terminal aspartate caused by torsional restraints imposed by the K(i)–D(i+4) lactam bridge. To investigate this effect on helix nucleation, the more water‐soluble 2 was appended to N‐, C‐, or both termini of a palindromic peptide ARAARAARA (≤5 % helicity), resulting in 67, 92, or 100 % relative α‐helicity, as calculated from CD spectra. From the C‐terminus of peptides, 2 can nucleate at least six α‐helical turns. From the N‐terminus, imperfect alignment of the Asp5 backbone amide in 2 reduces helix nucleation, but is corrected by a second unit of 2 separated by 0–9 residues from the first. These cyclic peptides are extremely versatile helix nucleators that can be placed anywhere in 5–25 residue peptides, which correspond to most helix lengths in protein–protein interactions. 相似文献
Helix‐constrained polypeptides have attracted great interest for modulating protein–protein interactions (PPI). It is not known which are the most effective helix‐inducing strategies for designing PPI agonists/antagonists. Cyclization linkers (X1–X5) were compared here, using circular dichroism and 2D NMR spectroscopy, for α‐helix induction in simple model pentapeptides, Ac‐cyclo(1,5)‐[X1‐Ala‐Ala‐Ala‐X5]‐NH2, in water. In this very stringent test of helix induction, a Lys1→Asp5 lactam linker conferred greatest α‐helicity, hydrocarbon and triazole linkers induced a mix of α‐ and 310‐helicity, while thio‐ and dithioether linkers produced less helicity. The lactam‐linked cyclic pentapeptide was also the most effective α‐helix nucleator attached to a 13‐residue model peptide. 相似文献
Combining an electrophilic iron complex [Fe(Fpda)(THF)]2 ( 3 ) [Fpda=N,N′‐bis(pentafluorophenyl)‐o‐phenylenediamide] with the pre‐activation of α‐alkyl‐substituted α‐diazoesters reagents by LiAl(ORF)4 [ORF=(OC(CF3)3] provides unprecedented access to selective iron‐catalyzed intramolecular functionalization of strong alkyl C(sp3)?H bonds. Reactions occur at 25 °C via α‐alkyl‐metallocarbene intermediates, and with activity/selectivity levels similar to those of rhodium carboxylate catalysts. Mechanistic investigations reveal a crucial role of the lithium cation in the rate‐determining formation of the electrophilic iron‐carbene intermediate, which then proceeds by concerted insertion into the C?H bond. 相似文献
Complex formation of 2, 6‐bis(2′‐hydroxyphenyl)pyridine (H2Li) with Fe3+ and Cu2+ was investigated in a H2O/DMSO medium (mole fraction xDMSO = 0.2) by potentiometric and spectrophotometric methods. The pKa values of [H3Li]+ are 2.25, 10.51 and 14.0 (25 °C, 0.1 M KCl). The formation constants of [FeIII(Li)]+ and [CuII(Li)] (25 °C, 0.1 M KCl) are log β1 = 21.5 for Fe3+ and log β1 = 18.5 for Cu2+. The crystal structures of [Al(Li)2Na(EtOH)3], [Fe(Li)2Na(EtOH)3], and [Cu(Li)(py)]2 were investigated by single‐crystal X‐ray diffraction analyses. The FeIII and the AlIII compound are isotypic and crystallize in the monoclinic space group P21/n. Al‐compound (215 K): a = 12.599(3) Å, b = 16.653(3) Å, c = 17.525(4) Å, β = 100.27(3)°, Z = 4 for C40H40AlN2NaO7; Fe‐compound (293 K): a = 12.753(3) Å, b = 16.715(3) Å, c = 17.493(3) Å, β = 99.68(3)°, Z = 4 for C40H40FeN2NaO7. Both compounds contain a homoleptic, anionic bis‐complex [M(Li)2]‐ of approximate D2 symmetry. The Cu compound crystallized as an uncharged, dinuclear and centrosymmetric [Cu(Li)(py)]2 complex in the monoclinic space group P21/n with (293 K) a = 13.386(3) Å, b = 9.368(2) Å, c = 14.656(3) Å, β = 100.65(3)°, Z = 2 for C44H32Cu2N4O4. The structural properties and in particular the possible influence of the ligand geometry on the stability of the metal complexes is discussed. 相似文献
Maintaining specific conformations of peptide ligands is crucial for improving the efficacy of biological interactions. Here, a one‐pot polymerization strategy for stabilizing the α‐helical conformation of peptides while simultaneously constructing multimeric ligands is presented. The new method, termed stapling polymerization, uses radical polymerization between acryloylated peptide side chains and vinylic monomers. Studies with model peptides indicate that i, i+7 crosslinking is effective for the helix stabilization, whereas i, i+4 crosslinking is not. The stapling polymerization results in the formation of peptide–polyacrylamide conjugates that include ≈3–16 peptides in a single conjugate. This stapling polymerization provides a simple but powerful methodology to fabricate multimeric α‐helices that can further be developed to modulate multivalent biomacromolecular interactions.
The unusual 12‐membered ring compound, octahydro‐5H,12H‐4,11‐methano‐1H,7H‐bis[1,2,5]oxadiazolo[3,4‐d:3′,4′‐j][1,7,3,9]dioxadiazacyclododecine is obtained from the acid catalyzed reaction of 3‐amino‐4‐hydroxymethylfurazan with formaldehyde instead of the expected methylene‐bridged compound, 4,4′‐methylenebis[4,5‐dihydro‐7H‐[1,2,5]oxadiazolo[3,4‐d][1,3]oxazine]. The compound crystallizes in Tetragonal, P43212, a = 6.4141(4) Å, b = 6.4141(4) Å, c = 26.525(3) Å, α = 90°, β = 90°, γ = 90°, V = 1091.27(16) Å3, Z = 4, dcalc = 1.614 Mg/m3. 相似文献
The title complex, C17H9N5·C6H4S4, contains π‐deficient bis(dinitrile) and TTF molecules stacked alternately in columns along the a‐axis direction; the interplanar angle between the TTF molecule and the isoindolinyl C4N[C(CN)2]2 moiety is 1.21 (4)°. The N‐allyl moiety in the TCPI molecule is oriented at an angle of 87.10 (10)° with respect to the five‐membered C4N ring, and the four C[triple‐bond]N bond lengths range from 1.134 (3) to 1.142 (3) Å, with C—C[triple‐bond]N angles in the range 174.3 (3)–176.9 (2)°. In the TTF system, the S—C bond lengths are 1.726 (3)–1.740 (3) and 1.751 (2)–1.763 (2) Å for the external S—C(H) and internal S—C(S) bonds, respectively. 相似文献
2,4,8‐Trialkyl‐3‐thia‐1,5‐diazabicyclo[3.2.1]octanes have been obtained by the regioselective and stereoselective cyclocondensation of 1,2‐ethanediamine with aldehydes RCHO (R═Me, Et, Prn, Bun, Pentn) and H2S at molar ratio 1:3:2 at 0°C. The increase in molar ratio of thiomethylation mixture RCHO–H2S (6:4) at 40°C resulted in selective formation of bis‐(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)ethanes. Cyclothiomethylation of aliphatic α,ω‐diamines with aldehydes RCHO (R═Me, Et) and H2S at molar ratio 1:6:4 and at 40°С led to α,ω‐bis(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)alkanes. Stereochemistry of 2,4,8‐trialkyl‐3‐thia‐1,5‐diazabicyclo[3.2.1]octanes have been determined by means of 1H and 13С NMR spectroscopy and further supported by DFT calculations at the B3LYP/6‐31G(d,p) level. The structure of α,ω‐bis(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)alkanes was confirmed by single‐crystal X‐ray diffraction study. 相似文献
Molecules of the title compound, alternatively called (R,R)‐N,N′‐bis(3‐methoxysalicylidene)‐trans‐cyclohexane‐1,2‐diamine, C22H26N2O4, contain two intramolecular O—H⃛N hydrogen bonds and adopt a conformation with approximate twofold rotational symmetry. The molecules are linked by three C—H⃛O hydrogen bonds [H⃛O = 2.45–2.55 Å, C⃛O = 3.329 (2)–3.398 (2) Å and C—H⃛O = 142–172°] into a continuous framework. 相似文献
The small synthetic peptide, benzyl 2‐(tert‐butoxycarbonyl‐amino)isobutyrate, C16H23NO4, has the α‐helical conformation [|?| = 55.8 (2)° and |ψ| = 37.9 (2)°] observed in peptide fragments of peptaibols containing the α‐aminoisobutyric acid (Aib) residue. The structure shows no intramolecular hydrogen bonding, which would disrupt the limited conformational freedom associated with this amino acid. Two weak intermolecular hydrogen contacts are observed. 相似文献
Three‐ and five‐membered rings that bear the (Si‐C‐S ) and (Si‐C‐C‐C‐S ) unit have been synthesized by the reactions of L SiCl ( 1 ; L =PhC(NtBu)2) and L′ Si ( 2 ; L′ =CH{(C?CH2)(CMe)(2,6‐iPr2C6H3N)2}) with the thioketone 4,4′‐bis(dimethylamino)thiobenzophenone. Treatment of 4,4′‐bis(dimethylamino)thiobenzophenone with L SiCl at room temperature furnished the [1+2]‐cycloaddition product silathiacyclopropane 3 . However, reaction of 4,4′‐bis(dimethylamino)thiobenzophenone with L′ Si at low temperature afforded a [1+4]‐cycloaddition to yield the five‐membered ring product 4 . Compounds 3 and 4 were characterized by NMR spectroscopy, EIMS, and elemental analysis. The molecular structures of 3 and 4 were unambiguously established by single‐crystal X‐ray structural analysis. The room‐temperature reaction of 4,4′‐bis(dimethylamino)thiobenzophenone with L′ Si resulted in products 4 and 5 , in which 4 is the dearomatized product and 5 is formed under the 1,3‐migration of a hydrogen atom from the aromatic phenyl ring to the carbon atom of the C? S unit. Furthermore, the optimized structures of probable products were investigated by using DFT calculations. 相似文献