Orientational dynamics of water trapped between two nanoscopic hydrophobic solutes: A molecular dynamics simulation study

We investigate thoroughly the effect of confinement and solute topology on the orientational dynamics of water molecule in the interplate region between two nanoscopic hydrophobic paraffinlike plates. Results are obtained from molecular dynamics simulations of aqueous solutions of paraffinlike plates in the isothermal-isobaric ensemble. An analysis of survival time auto correlation function shows that the residence time of the water molecule in the confined region between two model nanoscopic hydrophobic plates depends on solute surface topology (intermolecular distance within the paraffinlike plate). As expected, the extent of confinement also changes the residence time of water molecules considerably. Orientational dynamics was analyzed along three different directions, viz., dipole moment, HH, and perpendicular to molecular plane vectors. It has been demonstrated that the rotational dynamics of the confined water does not follow the Debye rotational diffusion model, and surface topology of the solute plate and the extent of confinement have considerable effect on the rotational dynamics of the confined water molecules.     

The experimental studies on the determination of the ground and excited state dipole moments of some hemicyanine dyes

The ground state (mu(g)) and excited state (mu(e)) dipole moments of 15 hemicyanine dyes were studied at room temperature. They were estimated from solvatochromic shifts of the absorption and the fluorescence spectra as function of the solvent dielectric constant (varepsilon) and refractive index (n). In this paper we applied the Stokes shift phenomena not only for the determination of the difference in the dipole moment of excited state and ground state, but to determine the value of polarizability alpha as well. The obtained results show that excited state dipole moments of hemicyanine dyes are in the range from 5 to 15 Debye, and the difference between the excited and ground state dipole moments vary from 1 to 7 Debye. The excited and ground state dipole moments difference (mu(e)-mu(g)) obtained for selected dyes are positive. It means that the excited states of the dyes under the study are more polar than the ground state ones. Additionally, the value of both polarizability (alpha) and the Onsager radius (a) of each investigated hemicyanine dye molecule are determined, and the ratio of alpha/a(3) for each dye were calculated, which oscillate from 0.29 to 5.21. The increase in dipole moment has been explained in terms of the nature of excited state and its resonance structure.     

Computer simulation study of rotational diffusion in polar liquids of different types

Rotational diffusion in liquid acetonitrile, dimethylsulphoxide (DMSO), water, and methanol is studied with molecular dynamics simulations. The effects of hydrogen bonding and local dipole-dipole correlations (Kirkwood g-factor) on the relationship between the single molecule and collective relaxation are examined. The first rank single molecule dipole moment autocorrelation functions (ACFs) are constructed in the molecule-fixed coordinate frame and the principal components of rotation diffusion tensor are reported. Higher rank orientational ACFs are computed. These ACFs, as a rule, are strongly nonexponential (at least not single exponential) at longer times and the decomposition of these functions into a series of single exponentials results in broad distributions of relaxation times, with the broadening being particularly prominent in the case of higher rank ACFs. The rank dependence of characteristic times calculated as weighted averages over the relaxation time distributions does not follow the pattern of small angle (Debye) diffusion model for all liquids studied in this work except methanol. In contradiction, the same rank dependence computed by direct integration of ACFs leads to good agreement with the Debye diffusion model in the case of acetonitrile, DMSO, and water (but not methanol). The linear-angular momentum cross correlation functions are also computed and the effect of rototranslational coupling on reorientaional relaxation at longer times (>1.0?ps) is found to be small.     

Measurement of the electric quadrupole moment of CO

Measurements of the temperature dependence of the Buckingham effect (electric-field-gradient-induced birefringence, EFGIB) for gaseous carbon monoxide are presented. The measurements span the temperature range 301.2-473.9 K, which allows for separation of the temperature-independent hyperpolarizability contribution from the temperature-dependent quadrupole contribution. It is demonstrated that in the case of carbon monoxide, quantization of the rotational motion of the molecules needs to be considered, the analysis yielding a quadrupole moment of Θ = (-8.77 ± 0.31) × 10(-40) C m(2) and a hyperpolarizability term of b' = (-0.1243 ± 0.0078) × 10(-60) C(3) m(4) J(-2). For dipolar molecules, the quadrupole moment is origin dependent, and the value reported here is referred to an origin called the effective quadrupole center. Comparison of this value with the center-of-mass quadrupole moment obtained from other experiments yields information about the dynamic dipole-quadrupole and dipole-magnetic dipole polarizabilities. The temperature-independent term, which contributes (7.0 ± 0.6)% to the EFGIB at room temperature, is by no means insignificant, and must necessarily be accounted for if the quadrupole moment is to be definitively established. The measured Θ and b' are compared with the best available ab initio calculated values.     

Symmetry breaking in the relaxed S(1) excited state of bianthryl derivatives in weakly polar solvents.

The flash-photolysis time-resolved microwave conductivity technique (FP-TRMC) has been used to investigate the nature of the relaxed S(1) state of 9,9'-bianthryl (AA), 10-cyano-9,9'-bianthryl (CAA), and 10,10'-dicyano-9,9'-bianthryl (CAAC). Changes in both the real, Deltaepsilon' (dielectric constant), and imaginary, Deltaepsilon' ' (dielectric loss), components of the complex permittivity have been measured. The dielectric loss transients conclusively demonstrate the dipolar nature of S(1) for all three compounds in the pseudopolar solvents benzene and 1,4-dioxane, and even in the nonpolar solvents n-hexane and cyclohexane. The required symmetry breaking is considered to result from density and structural fluctuations in the solvent environment. The dipole relaxation times for AA (CAAC) are ca. 2 ps for the alkanes and 7.9 (5.3) and 14 (14) ps for benzene and dioxane, respectively. The time scale of dipole relaxation for the symmetrical compounds is much shorter than that for rotational diffusion and is attributed to intramolecular, flip-flop dipole reversal via a neutral excitonic state. The dipole moment of the transient dipolar state is estimated to be ca. 8 D, that is much lower than the value of ca. 20 D determined from the solvatochromic shifts in the fluorescence in intermediate to highly polar solvents which corresponds to close to complete charge separation. For the asymmetric compound, CAA, a dipole moment close to 20 D is found in all solvents, including n-hexane. Dipole relaxation in this case occurs on a time scale of several hundred picoseconds and is controlled mainly by diffusional rotation of the molecules. The mechanism and kinetics of formation of the dipolar excited states are discussed in the light of these results.     

Dielectric relaxation in polar nematic liquid crystals

The relationship between the complex dielectric permittivity tensor of a polar nematic liquid crystal and the autocorrelation matrix for the permanent dipole moment of a molecule is obtained. The theory is applicable to the whole frequency range which characterizes orientational relaxation in liquid crystals (up to ∼ 5 THz). The models of rotational diffusion and extended rotational diffusion in a mean field nematic potential are used to evaluate the dielectric absorption and dispersion in nematics.     

Microwave spectrum and dipole moment of 1,2,3,4-tetra-fluorobenzene

The microwave spectrum of the ground state of 1,2,3,4-tetrafluorobenzene has been measured in the range 7 to 25 GHz. A possible structure of the molecule is discussed. The rotational constants obtained are (in MHz): A = 2090.711 ± 0.012, B = 1196.257 ± 0.014, C = 760.880 ± 0.005. The observed inertial defect, Δ = 0.010 amu Ų, confirms the planar structure. A dipole moment of 2.42 ± 0.05 Debye was determined.     

白藜芦醇分子的转动惯量和电偶极矩

通过分子轨道理论和杂化轨道理论推断出较稳定的白藜芦醇分子是平面型分子,然后根据白藜芦醇分子结构特点计算了该化合物的一种稳定异构体的转动惯量,用矢量合成法计算了其电偶极矩,为微波辅助白藜芦醇萃取理论研究提供转动惯量和电偶极矩的数据.     

Dipole moment and self-association of cyclohexylsulfamic acid in 1,4-dioxane solution at 298.15?K

Abstract  

The density, refractive index, and electrical permittivity of cyclohexylsulfamic acid in 1,4-dioxane solutions were measured at 298.15 K. The limiting apparent specific volume, refraction, and polarization were calculated from the experimental data. The electrical dipole moment of cyclohexylsulfamic acid was estimated using the Debye, Onsager, and Kirkwood equations. The dipole association of cyclohexylsulfamic acid was treated with the assumption that the dipole moment of dimeric species is zero. The dimerization constant and dipole moment of monomeric species were evaluated.     

Analytical solutions for rotational diffusion in the mean field potential: application to the theory of dielectric relaxation in nematic liquid crystals

A theory of dielectric relaxation in nematics is developed for a molecular dipole moment directed at an arbitrary angle to the molecular long axis. Both exact and simple approximate analytical formulae for the longitudinal and transverse components of the complex dielectric permittivity tensor are obtained for the non-inertial rotational Brownian motion of a molecule in the mean field potential of Maier and Saupe. It appears that both longitudinal and transverse relaxation processes are effectively described by two Debye type mechanisms with corresponding relaxation times and dielectric strengths expressed in terms of the order parameter. The generalization of the theory for an arbitrary axially symmetric mean field potential is given.     

Dipolar response of hydrated proteins

The paper presents an analytical theory and numerical simulations of the dipolar response of hydrated proteins in solution. We calculate the effective dielectric constant representing the average dipole moment induced at the protein by a uniform external field. The dielectric constant shows a remarkable variation among the proteins, changing from 0.5 for ubiquitin to 640 for cytochrome c. The former value implies a negative dipolar susceptibility, that is a dia-electric dipolar response and negative dielectrophoresis. It means that ubiquitin, carrying an average dipole of ?240 D, is expected to repel from the region of a stronger electric field. This outcome is the result of a negative cross-correlation between the protein and water dipoles, compensating for the positive variance of the intrinsic protein dipole in the overall dipolar susceptibility. In contrast to the neutral ubiquitin, charged proteins studied here show para-electric dipolar response and positive dielectrophoresis. The study suggests that the dipolar response of proteins in solution is strongly affected by the coupling of the protein surface charge to the hydration water. The protein-water dipolar cross-correlations are long-ranged, extending ~2 nm from the protein surface into the bulk. A similar correlation length of about 1 nm is seen for the electrostatic potential produced by the hydration water inside the protein. The analysis of numerical simulations suggests that the polarization of the protein-water interface is highly heterogeneous and does not follow the standard dielectric results for cavities carved in dielectrics. The polarization of the water shell gains in importance, relative to the intrinsic protein dipole, at high frequencies, above the protein Debye peak. The induced interfacial dipole can be either parallel or antiparallel to the protein dipole, depending on the distribution of the protein surface charge. As a result, the high-frequency absorption of the protein solution can be either higher or lower than the absorption of water. Both scenarios have been experimentally observed in the THz window of radiation.     

Measurement of the electric quadrupole moment of N2O

Measurements of the temperature dependence of the Buckingham effect (electric-field-gradient-induced birefringence, EFGIB) for gaseous nitrous oxide are presented. Measurements span the temperature range 298.5-473.9 K, which allows for separation of the temperature-independent hyperpolarizability term from the temperature-dependent quadrupole term, yielding a quadrupole moment of Θ = (-11.03 ± 0.41) × 10(-40) C m(2), and a hyperpolarizability term of b = (-0.638 ± 0.063) × 10(-60) C(3) m(4) J(-2). For dipolar molecules, the quadrupole moment is origin dependent, and the value reported here is referred to an origin called the effective quadrupole center (EQC). Comparison of this value with the center of mass (CM) quadrupole moment obtained from MBER experiments yields information about the dynamic dipole-quadrupole and dipole-magnetic dipole polarizabilities. The temperature-independent term, previously assumed to contribute negligibly to the EFGIB, is found to contribute some (5.2 ± 0.6)% to the effect at room temperature and clearly needs to be accounted for if the quadrupole moment is to be definitively established.     

Molecular dynamics simulation of an electric field driven dipolar molecular rotor attached to a quartz glass surface

Molecular dynamics simulations of the response of a dipolar azimuthal 3-chloroprop-1-ynyl rotor mounted on the surface of quartz glass to a rotating electric field were performed. The rotor motion was classified as synchronous, asynchronous, random, or hindered, based on the value of the average lag of the rotor behind the field and a comparison of the intrinsic rotational barrier V(b) with kT. A phase diagram of rotor behavior was deduced at 10, 300, and 500 K as a function of field strength and frequency. A simple model for the rotor motion was developed, containing the driving force, the temperature, the height of the torsional barrier, and the friction constant of the rotor. Defining E(bo) to be the electric field strength necessary to get rotational response from the rotor ("breakoff field") and mu to be the rotor dipole moment component in the plane of rotation, we find that E(bo) is frequency independent when 2 microE(bo) is less than either V(b) or kT (the driving force needs to overcome the more important of the two, the intrinsic barrier or random thermal motion). At higher frequencies, E(bo) is a quadratic function of the frequency and the driving force fights friction, which is dictated by intramolecular vibrational redistribution (IVR) from the pumped rotational mode to all others. Fitting the simple model to simulation data, we derived a friction constant of 0.26 ps eV x (nu - 0.5)/THz between 500 and 1000 GHz.     

The molecular conformation and dipole moment of 1,4-thioxane from the microwave spectrum

The microwave spectrum of 1,4-thioxane, a heterocyclic analogue of cyclohexane, has been studied in the region 26.5–40 GHz. The molecule is a highly asymmetric rotor (k = ?0.0740917). From the analysis of the a-type transitions, the rotational constants determined are (in MHz) A = 4333.85, B = 3076.14 and C = 1991.96. A study of the Stark effect has yielded the dipole moment components (in Debye units) μ_a = 0.290 ± 0.003, gm_c = 0.0537 ± 0.0004, which give a total dipole moment of μ = 0.295 ± 0.003. These data are consistent with a chair conformation for the ring.     

Molecular geometry of OC···AgI determined by broadband rotational spectroscopy and ab initio calculations

Pure rotational spectra of the ground vibrational states of six isotopologues of OC···AgI have been measured by chirped-pulse Fourier transform microwave spectroscopy. The spectra are assigned to determine the rotational constant, B(0), centrifugal distortion constant, D(J), and nuclear quadrupole coupling constant of the iodine atom, χ(aa)(I). The complex is linear. Isotopic substitutions at the silver, carbon, and oxygen atoms allow bond lengths to be established by the r(0), r(s), and r(m)((1)) methods of structure determination. The length of the C-O bond, r(CO), in the r(0) geometry for OC···AgI is 0.008 ? shorter than that found in the free CO molecule. The length of the Ag-I bond, r(AgI), is 0.013 ? shorter than in free AgI. χ(aa)(I) is determined to be -769.84(22) MHz for OC···(107)AgI implying an ionic character of 0.66 for the metal halide bond. Attachment of carbon monoxide to the isolated AgI molecule results in an increase of the ionic character of AgI of 0.12. The molecular structure and spectroscopic parameters determined from the experimental data are presented alongside the results of calculations at the explicitly correlated coupled-cluster singles, doubles and perturbative triples level. Vibrational frequencies, the electric dipole moment, the nuclear quadrupole coupling constant, and the dissociation energy of the molecule have been calculated.     

Motional narrowing of the rotational spectrum of trifluoropropyne at 6550 cm(-1) by intramolecular vibrational energy redistribution

We present the basic principles of dynamic rotational spectroscopy for the highly vibrationally excited symmetric top molecule trifluoropropyne (TFP,CF3CCH). Single molecular eigenstate rotational spectra of TFP were recorded in the region of the first overtone of the nu(1) acetylenic stretching mode at 6550 cm(-1) by infrared-pulsed microwave-Fourier transform microwave triple resonance spectroscopy. The average rotational constant (B) of the highly vibrationally mixed quantum states at 6550 cm(-1) is 2909.33 MHz, a value that is 40 MHz larger than the rotational constant expected for the unperturbed C-H stretch overtone (2869.39 MHz). The average rotational constant and rotational line shape of the molecular eigenstate rotational spectra are compared to the distribution of rotational constants expected for the ensemble of normal-mode vibrational states at 6550 cm(-1) that can interact by intramolecular vibrational energy redistribution (IVR). The normal-mode population distribution at 6550 cm(-1) can be described using a Boltzmann distribution with a microcanonical temperature of 1200 K. At this energy the rotational constant distribution in the normal-mode basis set is peaked at about 2910 MHz with a width of about 230 MHz. The distribution is slightly asymmetric with a tail to the high end. The experimentally measured dynamic rotational spectra are centered at the normal-mode distribution peak; however, the spectral width is significantly narrower (40 MHz) than normal-mode ensemble width (230 MHz). This reduction of the width, along with the Lorentzian shape of the eigenstate rotational spectra when compared to the Gaussian shape of the calculated ensemble distribution, illustrates the narrowing of the spectrum due to IVR exchange. The IVR exchange rate was determined to be 120 ps, about ten times faster than the rate at which energy is redistributed from the v=2 level of the acetylenic stretch.