Mass spectrometry for investigations of gas-phase radical cation chemistry : The two step cycloaddition of the benzene radical cation and 1,3-butadiene

Mass spectrometric techniques are now used extensively for the study of gas-phase radical cation chemistry. The generation and structural properties, the unimolecular and bimolecular chemistry of some representative radical cation systems, and the methods of study are reviewed. The structure of the ionmolecule adduct produced in the reaction of the benzene radical cation and neutral 1,3-butadiene was investigated by collisionally stabilizing the adduct and then acquiring its collision-activated decomposition spectrum. The CAD spectrum of the adduct changes dramatically as a function of the degree of collisional stabilization. This observation is interpreted in terms of two distinct structures for the adduct. The species that is stabilized at 0.7 Torr has a CAD spectrum similar to the 2-phenyl-2-butene radical cation. The second structure, stabilized at 0.1 Torr, has a CAD similar to that of 1-methylindan. The results of these experiments are interpreted in terms of a two-step cycloaddition mechanism for the formation of the 1-methylindan radical cation.     

Naphthidine di(radical cation)s-stabilized palladium nanoparticles for efficient catalytic Suzuki-Miyaura cross-coupling reactions

Stable Pd(0) nanoparticles were prepared at room temperature in 1,4-dioxane from PdCl₂ using N,N′-bis(4-methoxyphenyl)-(1,1′-binaphthyl)-4,4′-diamine (naphthidine) as reducing and stabilizing agent. This procedure resulted in Pd(0) particles possessing an average diameter of ca. 25 nm stabilized against aggregation due to a barrier of the naphthidine di(radical cation) Napht^2.2+. These particles were evaluated for their capability to act as catalysts in Suzuki-Miyaura coupling reactions. The Pd(0)/Napht^2.2+ provides a general and convenient method to prepare biaryls from aryl bromides or iodides and boronic acids with a broad range of functional groups in 1,4-dioxane at 80 °C and under aerobic conditions.     

Tetramethylcyclobutadiene radical cation

The tetramethylcyclobutadiene radical cation has been generated photochemically in solutions of aluminum halide σ complexes of tetramethylcyclobutadiene. It decays thermally to a “dimeric” radical cation.     

Methyl propionate radical cation

Examination of the reactions of the long-lived (>0.5-s) radical cations of CD₃CH₂COOCH₃ and CH₃CH₂COOCD₃ indicates that the long-lived, nondecomposing methyl propionate radical cation CH₃CH₂C(O)OCH ₃ ^+· isomerizes to its enol form CH₃CH=C(OH)OCH ₃ ^+· (ΔH _{isomerization} ? ?32 kcal/mol) via two different pathways in the gas phase in a Fourier-transform ion cyclotron resonance mass spectrometer. A 1,4-shift of a β-hydrogen of the acid moiety to the carbonyl oxygen yields the distonic ion ^·CH₂CH₂C⁺ (OH)OCH₃ that then rearranges to CH₃CH=C(OH)OCH ₃ ^+· probably by consecutive 1,5- and 1,4-hydrogen shifts. This process is in competition with a 1,4-hydrogen transfer from the alcohol moiety to form another distonic ion, CH₃CH₂C⁺(OH)OCH ₂ ^· , that can undergo a 1,4-hydrogen shift to form CH₃CH=C(OH)OCH ₃ ^+· . Ab initio molecular orbital calculations carried out at the UMP2/6-31G** + ZPVE level of theory show that the two distonic ions lie more than 16 kcal/mol lower in energy than CH₃CH₂C(O)OCH ₃ ^+· . Hence, the first step of both rearrangement processes has a great driving force. The 1,4-hydrogen shift that involves the acid moiety is 3 kcal/mol more exothermic (ΔH _{isomerization}=?16 kcal/mol) and is associated with a 4-kcal/mol lower barrier (10 kcal/mol) than the shift that involves the alcohol moiety. Indeed, experimental findings suggest that the hydrogen shift from the acid moiety is likely to be the favored channel.     

A nonelectrocyclic path from the cyclobutene cation radical to the 1,3-butadiene cation radical

The conversion of the cyclobutene cation radical to the 1,3-butadiene cation radical has been studied using MINDO /3 and ab initio SCF MO methods. Not only smooth electrocyclic but also stepwise, non-electrocyclic routes were considered. Both calculational methods agree that the preferred reaction path is a novel nonelectrocyclic one proceeding through an intermediate “cyclopropylcarbinyl cation radical.” The quantitative agreement in the activation parameters calculated by the two methods is excellent. The proposed intermediate also provides an attractive explanation for the mass spectrometric fragmentation patterns of the cyclobutene and butadiene cation radicals.     

Mass spectral evidence for the hydroxymethylene radical cation

Collisionally-activated decompositions show that ·CHO⁺H ions are stable, confirming theoretical predictions.     

Theoretical reaction paths for cation radical cycloadditions : The [3+2] or role-reversed cation radical diels-alder

An extended basis set ab initio reaction path calculation for the prototype role-reversed cation radical Diels-Alder reveals that even this symmetry-forbidden cyclization mode proceeds without activation, at least in the gas phase. An intermediate, termed a long-bond complex, is encountered on the path, but the energy minimum is so shallow that the reaction is considered likely to be concerted when entropy effects are considered. The calculation further reveals that the factor which importantly distinguishes the role-reversed cycloaddition mode from the allowed cycloaddition mode, namely, the presence of charge predominantly on the diene moiety as contrasted to the dienophilic moiety, is maintained well along the reaction path and even in the long-bond intermediate. Competition between the role-reversed Diels-Alder and a competing [2+1] cyclobutane cycloaddition is envisioned.     

Carbethoxyallylation using radical chemistry

Radicals derived from the esters of $\text{N}$-hydroxy-2-thiopyridone react smoothly in a concerted reaction with 2-carbethoxy-3-$\text{t}$-butylhioprop-1-ene to give the corresponding 2-carbethoxyallyl derivatives with shift of the double bond.     

Mechanism for radical cation transport in duplex DNA oligonucleotides

We investigated the photoinduced one-electron oxidation of a series of DNA oligomers having a covalently linked anthraquinone group (AQ) and containing [(A)(n)GG](m) or [(T)(n)GG](m) segments. These oligomers have m GG steps, where m = 4 or 6, separated by (A)(n) or (T)(n) segments, where n = 1-7 for the (A)(n) set and 1-5 for the (T)(n) set. Irradiation with UV light that is absorbed by the AQ causes injection of a radical cation into the DNA. The radical cation migrates through the DNA, causing chemical reaction, primarily at GG steps, that leads to strand cleavage after piperidine treatment. The uniform, systematic structure of the DNA oligonucleotides investigated permits the numerical solution of a kinetic scheme that models these reactions. This analysis yields two rate constants, k(hop), for hopping of the radical cation from one site to adjacent sites, and k(trap), for irreversible reaction of the radical cation with H(2)O or O(2). Analysis of these findings indicates that radical cation hopping in these duplex DNA oligomers is a process that occurs on a microsecond time scale. The value of k(hop) depends on the number of base pairs in the (A)(n) and (T)(n) segments in a systematic way. We interpret these results in terms of a thermally activated adiabatic mechanism for radical cation hopping that we identify as phonon-assisted polaron hopping.     

Ab initio inter-radical potential for p-phenylenediamine radical cation dimer

Ab initio molecular orbital calculations were carried out to investigate the inter-radical interaction of the paired p-phenylenediamine radical cations in the singlet state. After initial optimization of the dimer in the parallel sandwich (D2h) and parallel displaced (Cs) configurations at the B3LYP/6-31G* theoretical level, the MP2/6-31G* and B3LYP/6-31G* single energies of the dimer were calculated as a function of the inter-radical distance R. The depths of the potential minima near R = 3.2 A were estimated to be in the order of the hydrogen bonding energy, assuming that the electrostatic contribution between the cations is canceled out by the attractive contributions due to the counter anions on the aspect of a simple electrostatic model. This can be related to the indications of the cation dimer formation in solution in the presence of counter anions at a low temperature reported previously in the literature by resonance Raman and electronic absorption spectra. The inter-radical (Raman active) frequencies of the dimer were calculated, one of which corresponds to the reported value at 161 cm(-1) observed in the resonance Raman spectrum in ethanol at 200 K by Yokoyama and Maeda (Chem. Phys. Lett. 48 (1977) 59).     

Electronic states of ketene radical cation

The doublet electronic states of ketene, and ketene-d₂, radical cations produced by photoionisation with Helα (58.4 nm) and Hellα (30.4 nm) radiation, were studied by photoelectron spectroscopy. Seven such states were found below 28 eV ionisation energy and were assigned by comparison with the ionisation energies calculated by the correlated PNO-CEPA approach. The agreement is within ≈ 0.3 eV of the experimental data. An analysis of the contributions of reorganisation and correlation effects to the calculated ionisation energies is presented. The vibrational frequencies exciteα in four of the states of ketene-d₂ and ketene are presented and discussed in view of the assignments.     

Spectroscopy of free-base N-confused tetraphenylporphyrin radical anion and radical cation

The radical anions and radical cations of the two tautomers (1e and 1i) of 5,10,15,20-tetraphenyl N-confused free-base porphyrin have been studied using a combination of cyclic voltammetry, steady state absorption spectroscopy, and computational chemistry. N-Confused porphyrins (NCPs), alternatively called 2-aza-21-carba-5,10,15,20-tetraphenylporphyrins or inverted porphyrins, are of great interest for their potential as building blocks in assemblies designed for artificial photosynthesis, and understanding the absorption spectra of the corresponding radical ions is paramount to future studies in multicomponent arrays where electron-transfer reactions are involved. NCP 1e was shown to oxidize at a potential of E(ox) 0.65 V vs Fc(+)|Fc in DMF and reduce at E(red) -1.42 V, while the corresponding values for 1i in toluene were E(ox) 0.60 V and E(red) -1.64 V. The geometries of these radical ions were computed at the B3LYP/6-31+G(d)//B3LYP/6-31G(d) level in the gas phase and in solution using the polarizable continuum model (PCM). From these structures and that of H(2)TPP and its corresponding radical ions, the computed redox potentials for 1e and 1i were calculated using the Born-Haber cycle. While the computed reduction potentials and electron affinities were in excellent agreement with the experimental reduction potentials, the calculated oxidation potentials displayed a somewhat less ideal relationship with experiment. The absorption spectra of the four radical ions were also measured experimentally, with radical cations 1e(?+) and 1i(?+) displaying significant changes in the Soret and Q-band regions as well as new low energy absorption bands in the near-IR region. The changes in the absorption spectra of radical anions 1e(?-) and 1i(?-) were not as dramatic, with the changes occurring only in the Soret and Q-band regions. These results were favorably modeled using time-dependent density functional calculations at the TD-B3LYP/6-31+G(d)//B3LYP/6-31G(d) level. These results were also compared to the existing data of free base tetraphenylporphyrin and free base tetraphenylchlorin.     

Nighttime radical observations and chemistry

The nitrate radical, NO(3), is photochemically unstable but is one of the most chemically important species in the nocturnal atmosphere. It is accompanied by the presence of dinitrogen pentoxide, N(2)O(5), with which it is in rapid thermal equilibrium at lower tropospheric temperatures. These two nitrogen oxides participate in numerous atmospheric chemical systems. NO(3) reactions with VOCs and organic sulphur species are important, or in some cases even dominant, oxidation pathways, impacting the budgets of these species and their degradation products. These oxidative reactions, together with the ozonolysis of alkenes, are also responsible for the nighttime production and cycling of OH and peroxy (HO(2) + RO(2)) radicals. In addition, reactions of NO(3) with biogenic hydrocarbons are particularly efficient and are responsible for the production of organic nitrates and secondary organic aerosol. Heterogeneous chemistry of N(2)O(5) is one of the major processes responsible for the atmospheric removal of nitrogen oxides as well as the cycling of halogen species though the production of nitryl chloride, ClNO(2). The chemistry of NO(3) and N(2)O(5) is also important to the regulation of both tropospheric and stratospheric ozone. Here we review the essential features of this atmospheric chemistry, along with field observations of NO(3), N(2)O(5), nighttime peroxy and OH radicals, and related compounds. This review builds on existing reviews of this chemistry, and encompasses field, laboratory and modelling work spanning more than three decades.