Diastereoselective Alkylation of a Proline‐Derived Bicyclic Lactim Ether

N‐Boc‐protected L ‐proline ( 6 ) was converted into the bicyclic lactim ether (8aS)‐6,7,8,8a‐tetrahydro‐1‐methoxypyrrolo[1,2‐a]pyrazin‐4(3H)‐one ( 5 ) in four steps (Scheme 1). Deprotonation with LDA or LHMDS and subsequent alkylation resulted in the diastereoisomeric products cis‐ and trans‐ 9 . The diastereoselectivity was mainly dependent on the electrophile. Whereas small alkyl halides gave preferably cis‐ 9 , sterically more‐demanding alkyl halides resulted in cis/trans mixtures. Electrophiles bearing a π‐system favored the trans‐products 9 . Some isolated cis‐ and trans‐lactim ethers 9 were converted to the corresponding diketopiperazines cis‐ and trans‐ 10 by acid hydrolysis. The structures and configurations of several compounds were confirmed by NMR and NOE experiments, as well as by X‐ray crystallography (Figs. 1–4).     

cis‐trans Peptide‐Bond Isomerization in α‐Methylproline Derivatives

α‐Methyl‐L ‐proline is an α‐substituted analog of proline that has been previously employed to constrain prolyl peptide bonds in a trans conformation. Here, we revisit the cis‐trans prolyl peptide bond equilibrium in derivatives of α‐methyl‐L ‐proline, such as N‐Boc‐protected α‐methyl‐L ‐proline and the hexapeptide H‐Ala‐Tyr‐αMePro‐Tyr‐Asp‐Val‐OH. In Boc‐α‐methyl‐L ‐proline, we found that both cis and trans conformers were populated, whereas, in the short peptide, only the trans conformer was detected. The energy barrier for the cis‐trans isomerization in Boc‐α‐methyl‐L ‐proline was determined by line‐shape analysis of NMR spectra obtained at different temperatures and found to be 1.24 kcal/mol (at 298 K) higher than the corresponding value for Boc‐L ‐proline. These findings further illuminate the conformationally constraining properties of α‐methyl‐L ‐proline.     

5′‐Allyl‐2′‐benzoyloxy‐3′‐methoxy‐4‐nitroazobenzene

The structure of the title compound, 4‐allyl‐2‐methoxy‐6‐[(4‐nitrophenyl)diazenyl]phenyl benzoate, C₂₃H₁₉N₃O₅, displays the characteristic features of azobenzene derivatives. The azobenzene moiety of the molecule has a trans configuration and in this moiety, average C—N and N=N bond lengths are 1.441 (3) and 1.241 (3) Å, respectively.     

Photocontrolled Reversible Conversion of Nanotube and Nanoparticle Mediated by β‐Cyclodextrin Dimers

A photochemically interconvertible supramolecular nanotube–nanoparticle system was constructed through secondary assembling of self‐aggregates of amphiphilic porphyrin derivatives mediated by trans‐ and cis‐azobenzene‐bridged bis(permethyl‐β‐cyclodextrin). Significantly, these nanotubes and nanoparticles were able to interconvert upon irradiation at different wavelengths, and this photocontrolled morphological conversion is reversible and recyclable for tens of times, which will provide a feasible and convenient way to construct the ordered nanostructure with various morphologies that can be smartly controlled by the environmentally benign external stimulus.     

Synthesis and photoisomerization of an azobenzene derivative bearing two β-cyclodextrin units at both ends

An azobenzene derivative with two β-cyclodextrin units was synthesized as a novel photoswitchable host. It undergoes trans-to-cis photoisomerization in aqueous solution with 65.8% cis at the photostationary state and returns to the original trans from with half life of 54,8 h at 25°C. It exhibits circular dichroism bands in the π-π* and n-π* absorption regions of azobenzene in spite of the fact that the azobenzene unit cannot be included in the cyclodextrin cavity, and their absolute dichroism intensities of the cis form become much larger than those of trans one.     

Coordination‐Driven Macrocyclization for Locking of Photo‐ and Thermal cis→trans Isomerization of Azobenzene

Both trans and cis isomers of azobenzene‐linked bis‐terpyridine ligand L1 were incorporated in rigid macrocycles linked by Fe^II(tpy)₂ (tpy: terpyridine) units. The complex of the longer trans‐ L1 is dinuclear [(trans‐ L1 )₂ ? Fe^II₂], whereas the complex of the shorter cis‐ L1 is mononuclear [cis‐ L1? Fe^II]. The complex cis‐ L1? Fe^II was not only thermally stable but also photochemically inactive. These results indicate a perfectly locked state of cis‐azobenzene. The stable macrocyclic structure of cis‐ L1? Fe^II causes locking of the isomerization. To the best of our knowledge, this is first example of dual locking of photo‐ and thermal isomerization of cis‐azobenzene.     

Glycopolymeric inhibitors of β‐glucuronidase. III. Configurational effects of hydroxy groups in pendant glyco‐units in polymers upon inhibition of β‐glucuronidase

Two kinds of new glycopolymers, (P(VB‐1‐GlcaH‐co‐AAm), 9 ) and (P(VB‐1‐Glco‐co‐AAm), 10 ), were synthesized through the radical copolymerization of styrene derivatives bearing pendant D ‐glucaric and D ‐gluconic moieties, N‐(p‐vinylbenzyl)‐1‐D ‐glucaramide (VB‐1‐GlcaH, 7 ), and N‐(p‐vinylbenzyl)‐D ‐gluconamide (VB‐1‐Glco, 8 ), with acrylamide (AAm). Glycopolymer 9 bearing the pendant glucaric moiety at the first position inhibited the hydrolysis of a model compound for xenobiotics‐β‐glucuronide conjugates, p‐nitrophenyl β‐D ‐glucuronide, uncompetitively, in contrast to the competitive inhibition in the presence of the corresponding isomeric glycopolymer bearing the pendant D ‐glucaric unit at the sixth position (P(VB‐6‐GlcaH‐co‐AAm), 3 ) reported in our previous article. On the other hand, another copolymer 10 bearing the gluconic moiety was found not to inhibit the hydrolysis as well as the corresponding copolymer bearing pendant gulonic unit (P(VB‐6‐Glco‐co‐AAm), 4 ). These results indicate that the hydrolysis is influenced not only by existence of pendant carboxyl units but also by the direction on the linkage of the glyco‐units to the polymer frame. Therefore the configurational position of hydroxy groups in pendant glyco‐units in macromolecular inhibitors may be essential for the interaction with β‐glucuronidase. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 4895–4903, 2006     

A Light‐Controlled Molecular Brake with Complete ON–OFF Rotation

A light‐controlled molecular machine based on cyclic azobenzenophanes consisting of a dioxynaphthalene rotating unit and a photoisomerizable dioxyazobenzene unit bridged by methylene spacers is reported. In compounds 1 and 2 , 1,5‐ and 2,6‐dioxynaphthalene moieties, respectively, are linked to p‐dioxyazobenzene by different methylene spacers (n=2 in 1 a and 2 ; n=3 in 1 b ), whereas a 1,5‐dioxynaphthalene moiety is bonded to m‐dioxyazobenzene by bismethylene spacers in 3 . In 1 b and 2 , the naphthalene ring can rotate freely in both the trans and cis states at room temperature. The rotation speed can be controlled either by photoinduced reversible trans–cis (E–Z) isomerization of the azobenzene or by keeping the system at low temperature, as is evident from its NMR spectra. Furthermore, for the first time, we demonstrate a light‐controlled molecular brake, wherein the rotation of the naphthalene moiety through the cyclophane is completely OFF in the trans isomer of compound 3 due to its smaller cavity size. Such restricted rotation imparts planar chirality to the molecule, and the corresponding enantiomers could be resolved by chiral HPLC. However, the rotation of the naphthalene moiety is rendered ON in the cis isomer due to its increased cavity size, and it is manifested experimentally by the racemization of the separated enantiomers by photoinduced E–Z isomerization.     

Photoregulated Sol‐Gel Transition of Novel Azobenzene‐Functionalized Hydroxypropyl Methylcellulose and Its α‐Cyclodextrin Complexes

Summary: Novel azobenzene‐functionalized hydroxypropyl methylcellulose (AZO‐HPMC) polymers and their α‐cyclodextrin (α‐CD) complexes have been prepared. These polymers show interesting sol‐gel transition behavior in aqueous solutions. In the absence of α‐CD, the gelation temperature increases after UV irradiation, while in the presence of α‐CD, the gelation temperature decreases after UV irradiation. The difference in the gelation temperatures between the trans and cis samples of AZO‐HPMC opens a wide operating window for reversible regulation of the sol‐gel transition behavior by photoirradiation.

The UV‐induced cis/trans isomerism of azobenzene‐functionalized hydroxypropyl methylcellulose and its α‐cyclodextrin complexes.     

Molecular Design for Reversing the Photoswitching Mode of Turning ON and OFF DNA Hybridization

A new photoswitch for DNA hybridization involving para‐substituted azobenzenes (such as isopropyl‐ or tert‐butyl‐substituted derivatives) with L ‐threoninol as a linker was synthesized. Irradiation of the modified DNA with visible light led to dissociation of the duplex owing to the destabilization effect of the bulky substituent on the trans‐azobenzene. In contrast, trans‐to‐cis isomerization (UV light irradiation) facilitated duplex formation. The direction of this photoswitching mode was entirely reversed relative to the previous system with an unmodified azobenzene on D ‐threoninol whose trans form turned on the hybridization, and cis form turned it off. Such reversed and reversible photoswitching of DNA hybridization was directly demonstrated by using fluorophore‐ and quencher‐attached oligonucleotides. Furthermore, it was revealed that the cis‐to‐trans thermal isomerization was greatly suppressed in the presence of the complementary strand owing to the formation of the more‐stable duplex in the cis form.     

trans–cis Photoisomerization of Azobenzene‐Conjugated Dithiolato‐Bipyridine Platinum(II) Complexes: Extension of Photoresponse to Longer Wavelengths and Photocontrollable Tristability

Azobenzene derivatives modified with dithiolato‐bipyridine platinum(II) complexes were synthesized, revealing their highly extended photoresponses to the long wavelength region as well as unique photocontrollable tristability. The absorptions of trans‐ 1 and trans‐ 2 with one azobenzene group on the dithiolene and bipyridine ligands, respectively, cover the range from 300 to 700 nm. These absorptions are ascribed, by means of time‐dependent (TD)DFT calculations, to transitions from dithiolene(π) to bipyridine(π*), namely, interligand charge transfer (CT), π–π*, and n–π* transitions of the azobenzene unit, and π–π* transitions of the bipyridine ligand. In addition, only trans‐ 1 shows distinctive electronic bands, assignable to transitions from the dithiolene(π) to azobenzene(π*), defined as intraligand CT. Complex 1 shows photoisomerization behavior opposite to that of azobenzene: trans‐to‐cis and cis‐to‐trans conversions proceed with 405 and 312 nm irradiation, which correspond to excitation with the intraligand CT, and π–π* bands of the azobenzene and bipyridine units, respectively. In contrast, complex 2 shows photoisomerization similar to that of azobenzene: trans‐to‐cis and cis‐to‐trans transformations occur with 365 and 405 nm irradiation, respectively. Irradiation at 578 nm, corresponding to excitation of the interligand CT transitions, results in cis‐to‐trans conversion of both 1 and 2 , which is the longest wavelength ever reported to effect the photoisomerization of the azobenzene group. The absorption and photochromism of 4 , which has azobenzene groups on both the dithiolato and bipyridine ligands, have characteristics quite similar to those of 1 and 2 , which furnishes 4 with photocontrollable tristability in a single molecule using light at 365, 405, and 578 nm. We also clarified that 1 and 2 have high photoisomerization efficiencies, and good thermal stability of the cis forms. Complexes 3 and 5 have almost the identical photoresponse to those of their positional isomers, complexes 2 and 4 .     

Ester Hydrolysis by a Cyclodextrin Dimer Catalyst with a Tridentate N,N′,N′′‐Zinc Linking Group

A new β‐cyclodextrin dimer, 2,6‐dimethylpyridine‐bridged‐bis(6‐monoammonio‐β‐cyclodextrin) (pyridyl BisCD, L), is synthesized. Its zinc complex (ZnL) is prepared, characterized, and applied as a catalyst for diester hydrolysis. The formation constant (log K_ML=7.31±0.04) of the complex and deprotonation constant (pK_a1=8.14±0.03, pK_a2=9.24±0.01) of the coordinated water molecule were determined by a potentiometric pH titration at (25±0.1)°C, indicating a tridentate N,N′,N′′‐zinc coordination. Hydrolysis kinetics of carboxylic acid esters were determined with bis(4‐nitrophenyl)carbonate (BNPC) and 4‐nitrophenyl acetate (NA) as the substrates. The resulting hydrolysis rate constants show that ZnL has a very high rate of catalysis for BNPC hydrolysis, yielding an 8.98×10³‐fold rate enhancement over uncatalyzed hydrolysis at pH 7.00, compared to only a 71.76‐fold rate enhancement for NA hydrolysis. Hydrolysis kinetics of phosphate esters catalyzed by ZnL are also investigated using bis(4‐nitrophenyl)phosphate (BNPP) and disodium 4‐nitrophenyl phosphate (NPP) as the substrates. The initial first‐order rate constant of catalytic hydrolysis for BNPP was 1.29×10^?7 s^?1 at pH 8.5, 35 °C and 0.1 mM catalyst concentration, about 1600‐fold acceleration over uncatalyzed hydrolysis. The pH dependence of the BNPP cleavage in aqueous buffer was shown as a sigmoidal curve with an inflection point around pH 8.25, which is nearly identical to the pK_a value of the catalyst from the potentiometric titration. The k_BNPP of BNPP hydrolysis promoted by ZnL is found to be 1.68×10^?3 M ^?1 s^?1, higher than that of NPP, and comparatively higher than those promoted by its other tridentate N,N′,N′′‐zinc analogues.     

Synthesis and 1H and 13C NMR structural analysis of cis‐ and trans‐2‐imino‐1,3‐ and ‐3,1‐perhydrobenzoxazines and their 3‐ and 1‐N‐methyl derivatives

cis‐ and trans‐2‐imino‐1,3‐ and ‐3,1‐perhydrobenzoxazines and the N‐methyl derivatives of the latter were synthesized from the corresponding cyclic 1,3‐amino alcohol with cyanogen bromide. The configurations of the studied compounds were confirmed by ¹H and ¹³C NMR spectra. All trans‐fused compounds exist in biased chair–chair conformations as expected, whereas the cis‐fused 1,3‐benzoxazines attain exclusively the O‐in conformations. The cis‐fused 3,1‐benzoxazines, especially the 1‐methyl‐substituted derivatives, tend to favor the N‐out form, obviously owing to the favorable axial orientation of this N‐methyl. Copyright © 2003 John Wiley & Sons, Ltd.     

Photoinduced Formation of an Azobenzene‐Based CD‐Active Supramolecular Cyclic Dimer

A series of new photo‐responsive amino acid‐derived azobenzenedicarboxylic acid derivatives (S)‐ 1 a – e were synthesized. Compound (S)‐ 1 a in the trans form exhibited no circular dichroism (CD) signal in DMF under ambient conditions, whereas intense Cotton effects were observed upon UV irradiation, indicating the formation of a chiral supramolecular structure in the cis form. The CD signals disappeared when trifluoroacetic acid (TFA) was added to the solution. The ester counterpart [(S)‐ 1 a′ ] showed no CD signal. Hydrogen bonding between the carboxy groups seemed necessary for constructing the supramolecular structure. The kinetic studies of cis to trans isomerization of (S)‐ 1 a demonstrated that the formation of a chiral supramolecule enhances the stability of the cis‐azobenzene structure. The ESI mass spectrum of stilbenedicarboxylic acid (S)‐ 4 , an analogue of (S)‐ 1 b , confirmed the formation of a dimer. A theoretical CD study revealed that (S)‐ 1 a in the cis form should be present as a cyclic chiral dimer.     

Total Synthesis of (−)‐Salvinorin A

Salvinorin A ( 1 ) is natural hallucinogen that binds the human κ‐opioid receptor. A total synthesis has been developed that parlays the stereochemistry of l ‐(+)‐tartaric acid into that of (?)‐ 1 via an unprecedented allylic dithiane intramolecular Diels–Alder reaction to obtain the trans‐decalin scaffold. Tsuji allylation set the C9 quaternary center and a late‐stage stereoselective chiral ligand‐assisted addition of a 3‐titanium furan upon a C12 aldehyde/C17 methyl ester established the furanyl lactone moiety. The tartrate diol was finally converted into the C1,C2 keto‐acetate.     

Differentiation of Boc‐protected α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptide positional isomers by electrospray ionization tandem mass spectrometry

Two new series of Boc‐N‐α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptides containing repeats of L ‐Ala‐δ⁵‐Caa/δ⁵‐Caa‐L ‐Ala and β³‐Caa‐δ⁵‐Caa/δ⁵‐Caa‐β³‐Caa (L ‐Ala = L ‐alanine, Caa = C‐linked carbo amino acid derived from D ‐xylose) have been differentiated by both positive and negative ion electrospray ionization (ESI) ion trap tandem mass spectrometry (MS/MS). MSⁿ spectra of protonated isomeric peptides produce characteristic fragmentation involving the peptide backbone, the Boc‐group, and the side chain. The dipeptide positional isomers are differentiated by the collision‐induced dissociation (CID) of the protonated peptides. The loss of 2‐methylprop‐1‐ene is more pronounced for Boc‐NH‐L ‐Ala‐δ‐Caa‐OCH₃ (1), whereas it is totally absent for its positional isomer Boc‐NH‐δ‐Caa‐L ‐Ala‐OCH₃ (7), instead it shows significant loss of t‐butanol. On the other hand, second isomeric pair shows significant loss of t‐butanol and loss of acetone for Boc‐NH‐δ‐Caa‐β‐Caa‐OCH₃ (18), whereas these are insignificant for its positional isomer Boc‐NH‐β‐Caa‐δ‐Caa‐OCH₃ (13). The tetra‐ and hexapeptide positional isomers also show significant differences in MS² and MS³ CID spectra. It is observed that ‘b’ ions are abundant when oxazolone structures are formed through five‐membered cyclic transition state and cyclization process for larger ‘b’ ions led to its insignificant abundance. However, b₁⁺ ion is formed in case of δ,α‐dipeptide that may have a six‐membered substituted piperidone ion structure. Furthermore, ESI negative ion MS/MS has also been found to be useful for differentiating these isomeric peptide acids. Thus, the results of MS/MS of pairs of di‐, tetra‐, and hexapeptide positional isomers provide peptide sequencing information and distinguish the positional isomers. Copyright © 2010 John Wiley & Sons, Ltd.     

Photocyclization reactions. Part 8. Synthesis of 2‐quinolone,quinoline and coumarin derivatives using trans‐cis isomerization by photoreaction

2‐Quinolone 2 , quinoline 3 , coumarin (2H‐1‐benzopyran‐ 2 ‐one) 5 , and 2H‐1‐benzopyran hemiacetal 6 were synthesized by photocyclization reaction of traans‐o‐aminocinnamoyl derivatives trans‐ 1 and trans‐o‐hydroxycinnamoyl derivatives trans‐ 4 . The reaction proceeds through trans‐cis isomerization followed by intramolecular cyclization.     

Synthesis and transformations of stereoisomeric ethyl 2‐isothiocyanato‐1‐cyclopentanecarboxylatesm

Ethyl vis‐ and trans‐2‐isothiocyanato‐1‐cyclopentanecarboxylates 2 and 7 were prepared by the reaction of the corresponding alicyclic ethyl 2‐amino‐1‐carboxylates and thiophosgene. The cis‐isothiocyanato compound 2 underwent ring closure with amines in one or two steps, resulting in 3‐substituted‐cis‐2‐thioxocyclopenta[d]pyrimidin‐4‐ones 3a‐g. The trans isomer 7 failed to cyclize, but gave carboxamide 8a,b or thiourea ester derivatives 9a,b.     

Analogues of α‐Campholenal (= (1R)‐2,2,3‐Trimethylcyclopent‐3‐ene‐1‐acetaldehyde) as Building Blocks for (+)‐β‐Necrodol (= (1S,3S)‐2,2,3‐Trimethyl‐4‐methylenecyclopentanemethanol) and Sandalwood‐like Alcohols

To complete our panorama in structure–activity relationships (SARs) of sandalwood‐like alcohols derived from analogues of α‐campholenal (= (1R)‐2,2,3‐trimethylcyclopent‐3‐ene‐1‐acetaldehyde), we isomerized the epoxy‐isopropyl‐apopinene (?)‐ 2d to the corresponding unreported α‐campholenal analogue (+)‐ 4d (Scheme 1). Derived from the known 3‐demethyl‐α‐campholenal (+)‐ 4a , we prepared the saturated analogue (+)‐ 5a by hydrogenation, while the heterocyclic aldehyde (+)‐ 5b was obtained via a Bayer‐Villiger reaction from the known methyl ketone (+)‐ 6 . Oxidative hydroboration of the known α‐campholenal acetal (?)‐ 8b allowed, after subsequent oxidation of alcohol (+)‐ 9b to ketone (+)‐ 10 , and appropriate alkyl Grignard reaction, access to the 3,4‐disubstituted analogues (+)‐ 4f,g following dehydration and deprotection. (Scheme 2). Epoxidation of either (+)‐ 4b or its methyl ketone (+)‐ 4h , afforded stereoselectively the trans‐epoxy derivatives 11a,b , while the minor cis‐stereoisomer (+)‐ 12a was isolated by chromatography (trans/cis of the epoxy moiety relative to the C₂ or C₃ side chain). Alternatively, the corresponding trans‐epoxy alcohol or acetate 13a,b was obtained either by reduction/esterification from trans‐epoxy aldehyde (+)‐ 11a or by stereoselective epoxidation of the α‐campholenol (+)‐ 15a or of its acetate (?)‐ 15b , respectively. Their cis‐analogues were prepared starting from (+)‐ 12a . Either (+)‐ 4h or (?)‐ 11b , was submitted to a Bayer‐Villiger oxidation to afford acetate (?)‐ 16a . Since isomerizations of (?)‐ 16 lead preferentially to β‐campholene isomers, we followed a known procedure for the isomerization of (?)‐epoxyverbenone (?)‐ 2e to the norcampholenal analogue (+)‐ 19a . Reduction and subsequent protection afforded the silyl ether (?)‐ 19c , which was stereoselectively hydroborated under oxidative condition to afford the secondary alcohol (+)‐ 20c . Further oxidation and epimerization furnished the trans‐ketone (?)‐ 17a , a known intermediate of either (+)‐β‐necrodol (= (+)‐(1S,3S)‐2,2,3‐trimethyl‐4‐methylenecyclopentanemethanol; 17c ) or (+)‐(Z)‐lancifolol (= (1S,3R,4Z)‐2,2,3‐trimethyl‐4‐(4‐methylpent‐3‐enylidene)cyclopentanemethanol). Finally, hydrogenation of (+)‐ 4b gave the saturated cis‐aldehyde (+)‐ 21 , readily reduced to its corresponding alcohol (+)‐ 22a . Similarly, hydrogenation of β‐campholenol (= 2,3,3‐trimethylcyclopent‐1‐ene‐1‐ethanol) gave access via the cis‐alcohol rac‐ 23a , to the cis‐aldehyde rac‐ 24 .     

A New Benzotriazole‐Mediated Stereoflexible Gateway to Hetero‐2,5‐diketopiperazines

Open chain Cbz‐L ‐aa¹‐L ‐Pro‐Bt (Bt=benzotriazole) sequences were converted into either the corresponding trans‐ or cis‐fused 2,5‐diketopiperazines (DKPs) depending on the reaction conditions. Thermodynamic tandem cyclization/epimerization afforded selectively the corresponding trans‐DKPs (69–75 %). Complementarily, tandem deprotection/cyclization led to the cis‐DKPs (65–72 %). A representative set of proline‐containing cis‐ and trans‐DKPs has been prepared. A mechanistic investigation, based on chiral HPLC, kinetics, and computational studies enabled a rationalization of the results.