Ab initio characterization of XH3 (X=N, P). I. Ammonia, phosphine and their related ions and radicals: structure and thermochemistry

Ammonia, phosphine and their related cations, anions and radicals have been investigated at a high level of accuracy. The singles and doubles coupled cluster method including a perturbational correction for connected triple excitations, CCSD(T), in conjunction with correlation consistent basis sets ranging in size from triple to sextuple zeta have been employed. Extrapolation to the complete basis set limit has been used with accurate treatments of core–valence correlation effects in order to accurately predict structures, ionization potentials, electron affinities as well as N–H and P–H bond dissociation energies. For all the species studied, harmonic vibrational frequencies have also been evaluated in order to obtain zero-point corrections.     

Theoretical reference values for the AE6 and BH6 test sets from explicitly correlated coupled-cluster theory

We propose a new computational protocol to obtain highly accurate theoretical reference data. This protocol employs the explicitly correlated coupled-cluster method with iterative single and double excitations as well as perturbative triple excitations, CCSD(T)(F12), using quadruple-z\zeta basis sets. Higher excitations are accounted for by conventional CCSDT(Q) calculations using double-z\zeta basis sets, while core/core-valence correlation effects are estimated by conventional CCSD(T) calculations using quadruple-z\zeta basis sets. Finally, scalar-relativistic effects are accounted for by conventional CCSD(T) calculations using triple-z\zeta basis sets. In the present article, this protocol is applied to the popular test sets AE6 and BH6. An error analysis shows that the new reference values obtained by our computational protocol have an uncertainty of less than 1 kcal/mol (chemical accuracy). Furthermore, concerning the atomization energies, a cancellation of the basis set incompleteness error in the CCSD(T)(F12) perturbative triples contribution with the corresponding error in the contribution from higher excitations is observed. This error cancellation is diminished by the CCSD(T*)(F12) method. Thus, we recommend the use of the CCSD(T*)(F12) method only for small- and medium-sized basis sets, while the CCSD(T)(F12) approach is preferred for high-accuracy calculations in large basis sets.     

Computational study of the reactions of methanol with the hydroperoxyl and methyl radicals. 1. Accurate thermochemistry and barrier heights

The reactions of CH(3)OH with the HO(2) and CH(3) radicals are important in the combustion of methanol and are prototypes for reactions of heavier alcohols in biofuels. The reaction energies and barrier heights for these reaction systems are computed with CCSD(T) theory extrapolated to the complete basis set limit using correlation-consistent basis sets, both augmented and unaugmented, and further refined by including a fully coupled treatment of the connected triple excitations, a second-order perturbative treatment of quadruple excitations (by CCSDT(2)(Q)), core-valence corrections, and scalar relativistic effects. It is shown that the M08-HX and M08-SO hybrid meta-GGA density functionals can achieve sub-kcal mol(-1) agreement with the high-level ab initio results, identifying these functionals as important potential candidates for direct dynamics studies on the rates of these and homologous reaction systems.     

Toward subchemical accuracy in computational thermochemistry: focal point analysis of the heat of formation of NCO and [H,N,C,O] isomers

In continuing pursuit of thermochemical accuracy to the level of 0.1 kcal mol(-1), the heats of formation of NCO, HNCO, HOCN, HCNO, and HONC have been rigorously determined using state-of-the-art ab initio electronic structure theory, including conventional coupled cluster methods [coupled cluster singles and doubles (CCSD), CCSD with perturbative triples (CCSD(T)), and full coupled cluster through triple excitations (CCSDT)] with large basis sets, conjoined in cases with explicitly correlated MP2-R12/A computations. Limits of valence and all-electron correlation energies were extrapolated via focal point analysis using correlation consistent basis sets of the form cc-pVXZ (X=2-6) and cc-pCVXZ (X=2-5), respectively. In order to reach subchemical accuracy targets, core correlation, spin-orbit coupling, special relativity, the diagonal Born-Oppenheimer correction, and anharmonicity in zero-point vibrational energies were accounted for. Various coupled cluster schemes for partially including connected quadruple excitations were also explored, although none of these approaches gave reliable improvements over CCSDT theory. Based on numerous, independent thermochemical paths, each designed to balance residual ab initio errors, our final proposals are DeltaH(f,0) ( composite function )(NCO)=+30.5, DeltaH(f,0) ( composite function )(HNCO)=-27.6, DeltaH(f,0) ( composite function )(HOCN)=-3.1, DeltaH(f,0) ( composite function )(HCNO)=+40.9, and DeltaH(f,0) ( composite function )(HONC)=+56.3 kcal mol(-1). The internal consistency and convergence behavior of the data suggests accuracies of +/-0.2 kcal mol(-1) in these predictions, except perhaps in the HCNO case. However, the possibility of somewhat larger systematic errors cannot be excluded, and the need for CCSDTQ [full coupled cluster through quadruple excitations] computations to eliminate remaining uncertainties is apparent.     

What are the most efficient basis set strategies for correlated wave function calculations of reaction energies and barrier heights?

As electronic structure methods are being used to obtain quantitatively accurate reaction energies and barrier heights for increasingly larger systems, the choice of an efficient basis set is becoming more critical. The optimum strategy for achieving basis set convergence can depend on the way that electron correlation is treated and can take advantage of flexibility in the order in which basis functions are added. Here we study several approaches for estimating accurate reaction energies and barrier heights from post-Hartree-Fock electronic structure calculations. First and second, we evaluate methods of estimating the basis set limit of second order Mo?ller-Plesset perturbation theory and of coupled cluster theory with single and double excitations and a quasiperturbative treatment of connected triple excitations by using explicitly correlated basis functions (in the F12a implementation) along with valence, polarization, and diffuse one-electron basis functions. Third, we test the scheme of adding a higher-order correction to MP2 results (sometimes called MP2∕CBS + ΔCCSD(T)). Finally, we evaluate the basis set requirements of these methods in light of comparisons to Weizmann-3.2, Weizmann-4, and CCSDT(2)(Q)∕CBS+CV+R results.     

Testing the parametric two-electron reduced-density-matrix method with improved functionals: application to the conversion of hydrogen peroxide to oxywater

Parametrization of the two-electron reduced density matrix (2-RDM) has recently enabled the direct calculation of electronic energies and 2-RDMs at the computational cost of configuration interaction with single and double excitations. While the original Kollmar energy functional yields energies slightly better than those from coupled cluster with single-double excitations, a general family of energy functionals has recently been developed whose energies approach those from coupled cluster with triple excitations [D. A. Mazziotti, Phys. Rev. Lett. 101, 253002 (2008)]. In this paper we test the parametric 2-RDM method with one of these improved functionals through its application to the conversion of hydrogen peroxide to oxywater. Previous work has predicted the barrier from oxywater to hydrogen peroxide with zero-point energy correction to be 3.3-to-3.9 kcal/mol from coupled cluster with perturbative triple excitations [CCSD(T)] and -2.3 kcal/mol from complete active-space second-order perturbation theory (CASPT2) in augmented polarized triple-zeta basis sets. Using a larger basis set than previously employed for this reaction-an augmented polarized quadruple-zeta basis set (aug-cc-pVQZ)-with extrapolation to the complete basis-set limit, we examined the barrier with two parametric 2-RDM methods and three coupled cluster methods. In the basis-set limit the M parametric 2-RDM method predicts an activation energy of 2.1 kcal/mol while the CCSD(T) barrier becomes 4.2 kcal/mol. The dissociation energy of hydrogen peroxide to hydroxyl radicals is also compared to the activation energy for oxywater formation. We report energies, optimal geometries, dipole moments, and natural occupation numbers. Computed 2-RDMs nearly satisfy necessary N-representability conditions.     

The accuracy of diffusion quantum Monte Carlo simulations in the determination of molecular equilibrium structures

For a test set of 17 first-row small molecules, the equilibrium structures are calculated with Ornstein-Uhlenbeck diffusion quantum Monte Carlo simulations guiding by trial wave functions constructed from floating spherical Gaussian orbitals and spherical Gaussian geminals. To measure performance of the Monte Carlo calculations, the mean deviation, the mean absolute deviation, the maximum absolute deviation, and the standard deviation of Monte Carlo calculated equilibrium structures with respect to empirical equilibrium structures are given. This approach is found to yield results having a uniformly high quality, being consistent with empirical equilibrium structures and surpassing calculated values from the coupled cluster model with single, double, and noniterative triple excitations [CCSD(T)] with the basis sets of cc-pCVQZ and cc-pVQZ. The nonrelativistic equilibrium atomization energies are also presented to assess performance of the calculated methods. The mean absolute deviations regarding experimental atomization energy are 0.16 and 0.21 kcal/mol for the Monte Carlo and CCSD(T)/cc-pCV(56)Z calculations, respectively.     

Ab initio thermochemistry involving heavy atoms: an investigation of the reactions Hg + IX (X = I, Br, Cl, O)

Accurate 0 K enthalpies have been calculated for reactions of mercury with a series of small iodine-containing molecules (I2, IBr, ICl, and IO). The calculations have been carried out with the coupled cluster singles and doubles method with a perturbative correction for connected triple excitations [CCSD(T)] using sequences of correlation consistent basis sets and accurate relativistic pseudopotentials. Corrections have been included to account for core-valence correlation, spin-orbit coupling, scalar relativity, and the Lamb shift. In a few cases coupled cluster calculations with iterative triple (CCSDT) and quadruple (CCSDTQ) excitations have been carried out to estimate the effects of higher order electron correlation. The pseudopotential calculations have also been compared to all electron calculations using second- and third-order Douglas-Kroll-Hess Hamiltonians. In addition to the reaction enthalpies, heats of formation, bond lengths, and harmonic vibrational frequencies have been calculated for the stable triatomic products HgI2, HgIBr, HgICl, and HgIO. Accurate dissociation energies, equilibrium bond lengths, and harmonic vibrational frequencies have also been calculated for each of the diatomic molecules involved in this study (HgI, HgBr, HgCl, HgO, I2, IBr, ICl, and IO). The reported enthalpies are expected to have accuracies of 1 kcal/mol or better.     

Combustion chemistry: important features of the C3H5 potential energy surface, including allyl radical, propargyl + H2, allene + H, and eight transition states

The C(3)H(5) potential energy surface (PES) encompasses molecules of great significance to hydrocarbon combustion, including the resonantly stabilized free radicals propargyl (plus H(2)) and allyl. In this work, we investigate the interconversions that take place on this PES using high level coupled cluster methodology. Accurate geometries are obtained using coupled cluster theory with single, double, and perturbative triple excitations [CCSD(T)] combined with Dunning's correlation consistent quadruple-ζ basis set cc-pVQZ. The energies for these stationary points are then refined by a systematic series of computations, within the focal point scheme, using the cc-pVXZ (X = D, T, Q, 5, 6) basis sets and correlation treatments as extensive as coupled cluster with full single, double, and triple excitation and perturbative quadruple excitations [CCSDT(Q)]. Our benchmarks provide a zero-point vibrational energy (ZPVE) corrected barrier of 10.0 kcal mol(-1) for conversion of allene + H to propargyl + H(2). We also find that the barrier for H addition to a terminal carbon atom in allene leading to propenyl is 1.8 kcal mol(-1) lower than that for the addition to a central atom to form the allyl radical.     

Studies of neutral and ionic CuAr and CuKr van der Waals complexes

Ab initio calculations of the interaction potential between Cu (or Cu(+)) and Ar (or Kr) have been carried out. A range of theoretical methods, including Hartree-Fock (HF), Moeller-Plesset perturbation methods to second order (MP2), and single and double excitation coupled cluster methods, with the perturbational effect of triple excitations (CCSD(T)), were employed with relativistic pseudopotential basis sets. The effects of bond functions and diffuse polarization (f, g, h) functions were tested on the calculation of the weak intermolecular interactions. Potential energy curves were obtained for all four complexes by MP2 and CCSD(T) methods. For CuKr, even with the largest basis set used, a binding energy that is only 37% of the measured value was obtained. Possible reasons for the disagreement are discussed.     

Basis set convergence of post-CCSD contributions to molecular atomization energies

Basis set convergence of correlation effects on molecular atomization energies beyond the coupled cluster with singles and doubles (CCSD) approximation has been studied near the one-particle basis set limit. Quasiperturbative connected triple excitations, (T), converge more rapidly than L(-3) (where L is the highest angular momentum represented in the basis set), while higher-order connected triples, T3-(T), converge more slowly--empirically, proportional to L(-5/2). Quasiperturbative connected quadruple excitations, (Q), converge smoothly as proportional to L(-3) starting with the cc-pVTZ basis set, while the cc-pVDZ basis set causes overshooting of the contribution in highly polar systems. Higher-order connected quadruples display only weak, but somewhat erratic, basis set dependence. Connected quintuple excitations converge very rapidly with the basis set, to the point where even an unpolarized double-zeta basis set yields useful numbers. In cases where fully iterative coupled cluster up to connected quintuples (CCSDTQ5) calculations are not an option, CCSDTQ(5) (i.e., coupled cluster up to connected quadruples plus a quasiperturbative connected quintuples correction) cannot be relied upon in the presence of significant nondynamical correlation, whereas CCSDTQ(5)(Lambda) represents a viable alternative. Connected quadruples corrections to the core-valence contribution are thermochemically significant in some systems. We propose an additional variant of W4 theory [A. Karton et al., J. Chem. Phys. 125, 144108 (2006)], denoted W4.4 theory, which is shown to yield a rms deviation from experimental atomization energies (active thermochemical tables, ATcT) of only 0.05 kcal/mol for systems for which ATcT values are available. We conclude that "3sigma 相似文献   

Quasiclassical trajectory calculations of acetaldehyde dissociation on a global potential energy surface indicate significant non-transition state dynamics

A recent experimental study [Houston, P. L.; Kable, S. H. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 16079] of the photodissociation of acetaldehyde (CH(3)CHO) has suggested two distinct mechanisms for the production of the molecular products CH(4) + CO. One corresponds to the traditional transition state mechanism and the other to a transition state-skirting path similar to the roaming channel previously reported in formaldehyde. To investigate this theoretically, a full-dimensional potential energy surface (PES) has been constructed. The PES was fit with permutationally invariant polynomials to 135,000 points calculated using coupled cluster theory with single and double excitations and a perturbative treatment of triple excitations [CCSD(T)] and correlation consistent basis sets of double- and triple-zeta quality. To test the accuracy of the PES additional CCSD(T) and multireference configuration interaction calculations were carried out. Quasiclassical trajectory calculations were run on the PES starting at the acetaldehyde equilibrium geometry and also at the conventional transition state (TS) for the molecular products CH(4) + CO. The former calculations agree well with the experimental results of Houston and Kable; however, those from the TS do not. The implications for a non-transition state, roaming mechanism in this molecule are discussed.     

Observable Structures of Small Neutral and Anionic Gold Clusters

Since gold clusters have mostly been studied theoretically by using DFT calculations, more accurate studies are of importance. Thus, small neutral and anionic gold clusters (Au_n and Au_n^?, n=4–7) were investigated by means of coupled cluster with singles, doubles, and perturbative triple excitations [CCSD(T)] calculations with large basis sets, and some differences between DFT and CCSD(T) results are discussed. Interesting isomeric structures that have dangling atoms were obtained. Structures having dangling atoms appear to be stable up to n=4 for neutral gold clusters and up to n=7 for anionic clusters. The relative stabilities and electronic properties of some isomers and major structures are discussed on the basis of the CCSD(T) calculations. This accurate structure prediction of small gold clusters corresponding to experimental photoelectron spectral peaks is valuable in the field of atom‐scale materials science including nanocatalysts.     

Methyl cation affinities of rare gases and nitrogen and the heat of formation of diazomethane

The methyl cation affinities of the rare gases have been calculated at 0 and 298 K by using coupled cluster theory including noniterative, quasiperturbative triple excitations with the new correlation-consistent basis sets for Xe up through aug-cc-pV5Z in some cases. To achieve near chemical accuracy (+/-1 kcal/mol) in the thermodynamic properties, we add to the estimated complete basis set valence binding energies, based on frozen core coupled cluster theory energies, two corrections: (1) a core/valence correction and (2) a scalar relativistic correction. Vibrational zero-point energies were computed at the coupled cluster level of theory at the CCSD(T)/aug-cc-pVDZ level. The calculated rare gas methyl cation affinities (MCA in kcal/mol) at 298 K are the following: MCA(He) = 1.7, MCA(Ne) = 2.5, MCA(Ar) = 16.9, MCA(Kr) = 25.5, and MCA(Xe) = 36.6. Because of the importance of the MCA(N(2)) in the experimental measurements of the MCA scale, we calculated a number of quantities associated with CH(3)N(2)(+) and CH(2)N(2). The calculated values for diazomethane at 298 K are: DeltaH(f)(CH(2)N(2)) = 65.3 kcal/mol, PA(CH(2)N(2)) = 211.9 kcal/mol, and MCA(N(2)) = 43.2 kcal/mol.     

A simple and efficient CCSD(T)-F12 approximation

A new explicitly correlated CCSD(T)-F12 approximation is presented and tested for 23 molecules and 15 chemical reactions. The F12 correction strongly improves the basis set convergence of correlation and reaction energies. Errors of the Hartree-Fock contributions are effectively removed by including MP2 single excitations into the auxiliary basis set. Using aug-cc-pVTZ basis sets the CCSD(T)-F12 calculations are more accurate and two orders of magnitude faster than standard CCSD(T)/aug-cc-pV5Z calculations.     

Gibbs energy of activation for thermal isomerization of (1Z)‐acetaldehyde hydrazone and (1Z)‐acetaldehyde N,N‐dimethylhydrazone by Gaussian‐4 theory and CCSD(T)/CBS computations

In this article, we examined the Gibbs energy of activation for the Z/E thermal isomerization reaction of (1Z)‐acetaldehyde hydrazone and (1Z)‐acetaldehyde N,N‐dimethylhydrazone, at 298.15 K in the solvent of cyclohexane. We carried out computations employing both the Gaussian‐4 (G4) theory and the coupled cluster method using both single and double substitutions and triple excitations noniteratively, CCSD(T). The CCSD(T) energy is extrapolated to the complete basis set (CBS). We compared the calculated results to the available experimental observation. It appeared that both G4 and CCSD(T)/CBS computations overestimated the experimental value by as much as about 6 and 12 kcal/mol in the present two cases. We discussed possible sources of error and proposed the experimental kinetic data could be questionable. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009     

Ab initio benchmark study for the oxidative addition of CH4 to Pd: importance of basis-set flexibility and polarization

To obtain a state-of-the-art benchmark potential energy surface (PES) for the archetypal oxidative addition of the methane C-H bond to the palladium atom, we have explored this PES using a hierarchical series of ab initio methods (Hartree-Fock, second-order M?ller-Plesset perturbation theory, fourth-order M?ller-Plesset perturbation theory with single, double and quadruple excitations, coupled cluster theory with single and double excitations (CCSD), and with triple excitations treated perturbatively [CCSD(T)]) and hybrid density functional theory using the B3LYP functional, in combination with a hierarchical series of ten Gaussian-type basis sets, up to g polarization. Relativistic effects are taken into account either through a relativistic effective core potential for palladium or through a full four-component all-electron approach. Counterpoise corrected relative energies of stationary points are converged to within 0.1-0.2 kcal/mol as a function of the basis-set size. Our best estimate of kinetic and thermodynamic parameters is -8.1 (-8.3) kcal/mol for the formation of the reactant complex, 5.8 (3.1) kcal/mol for the activation energy relative to the separate reactants, and 0.8 (-1.2) kcal/mol for the reaction energy (zero-point vibrational energy-corrected values in parentheses). This agrees well with available experimental data. Our work highlights the importance of sufficient higher angular momentum polarization functions, f and g, for correctly describing metal-d-electron correlation and, thus, for obtaining reliable relative energies. We show that standard basis sets, such as LANL2DZ+1f for palladium, are not sufficiently polarized for this purpose and lead to erroneous CCSD(T) results. B3LYP is associated with smaller basis set superposition errors and shows faster convergence with basis-set size but yields relative energies (in particular, a reaction barrier) that are ca. 3.5 kcal/mol higher than the corresponding CCSD(T) values.