Structural peculiarities of configurational isomers of 1‐styrylpyrroles according to 1Н, 13С and 15N NMR spectroscopy and density functional theory calculations: electronic and steric hindrance for planar structure

Comparative analysis of the ¹Н and ¹³С NMR data for a series of the E and Z‐1‐styrylpyrroles, E and Z‐1‐(1‐propenyl)pyrroles, 1‐vinylpyrroles and styrene suggests that the conjugation between the unsaturated fragments in the former compounds is reduced. This is the result of the mutual influence of the donor p–π and π–π conjugation having opposite directions. According to the NMR data combined with the density functional theory calculations, the Z isomer of 1‐styrylpyrrole has essentially a nonplanar structure because of the steric hindrance. However, the E isomer of 1‐styrylpyrrole is also an out‐of‐plane structure despite the absence of a sterical barrier for the planar one. Deviation of the E isomer from the planar structure seems to be caused by an electronic hindrance produced by a mutual influence of the p–π and π–π conjugation. The structure of the E isomer of the 2‐substituted 1‐styrylpyrroles is similar to that of the 2‐substituted 1‐vinylpyrroles. The steric effects in the Z isomer of the 2‐substituted 1‐styrylpyrroles result in the large increase of the dihedral angle between planes of the pyrrole ring and double bond. Copyright © 2013 John Wiley & Sons, Ltd.     

Pronounced stereospecificity of 1H, 13C, 15N and 77Se shielding constants in the selenophenyl oximes as shown by NMR spectroscopy and GIAO calculations

In the ¹H and ¹³C NMR spectra of 1‐(2‐selenophenyl)‐1‐alkanone oximes, the ¹H, the ¹³C‐3 and ¹³C‐5 signals of the selenophene ring are shifted by 0.1–0.4, 2.5–3.0 and 5.5–6.0 ppm, respectively, to higher frequencies, whereas those of the ¹³C‐1, ¹³C‐2 and ¹³C‐4 carbons are shifted by 4–5, ～11 and ～1.7 ppm to lower frequencies on going from the E to Z isomer. The ¹⁵N chemical shift of the oximic nitrogen is larger by 13–16 ppm in the E isomer relative to the Z isomer. An extraordinarily large difference (above 90 ppm) between the ⁷⁷Se resonance positions is revealed in the studied oxime isomers, the ⁷⁷Se peak being shifted to higher frequencies in the Z isomer. The trends in the changes of the measured chemical shifts are well reproduced by the GIAO calculations of the ¹H, ¹³C, ¹⁵N and ⁷⁷Se shielding constants in the energy‐favorable conformation with the syn orientation of the? C?N? O? H group relative to the selenophene ring. Copyright © 2009 John Wiley & Sons, Ltd.     

Study of conformations and hydrogen bonds in the configurational isomers of pyrrole‐2‐carbaldehyde oxime by 1H, 13C and 15N NMR spectroscopy combined with MP2 and DFT calculations and NBO analysis

The ¹H, ¹³C and ¹⁵N NMR studies have shown that the E and Z isomers of pyrrole‐2‐carbaldehyde oxime adopt preferable conformation with the syn orientation of the oxime group with respect to the pyrrole ring. The syn conformation of E and Z isomers of pyrrole‐2‐carbaldehyde oxime is stabilized by the N? H···N and N? H···O intramolecular hydrogen bonds, respectively. The N? H···N hydrogen bond in the E isomer causes the high‐frequency shift of the bridge proton signal by about 1 ppm and increase the ¹J(N, H) coupling by ～3 Hz. The bridge proton shows further deshielding and higher increase of the ¹J(N, H) coupling constant due to the strengthening of the N? H···O hydrogen bond in the Z isomer. The MP2 calculations indicate that the syn conformation of E and Z isomers is by ～3.5 kcal/mol energetically less favorable than the anti conformation. The calculations of ¹H shielding and ¹J(N, H) coupling in the syn and anti conformations allow the contribution to these constants from the N? H···N and N? H···O hydrogen bondings to be estimated. The NBO analysis suggests that the N? H···N hydrogen bond in the E isomer is a pure electrostatic interaction while the charge transfer from the oxygen lone pair to the antibonding orbital of the N? H bond through the N? H···O hydrogen bond occurs in the Z isomer. Copyright © 2010 John Wiley & Sons, Ltd.     

C?H···N and C?H···O intramolecular hydrogen bonding effects in the 1H, 13C and 15 N NMR spectra of the configurational isomers of 1‐vinylpyrrole‐2‐carbaldehyde oxime substantiated by DFT calculations

According to the ¹H, ¹³C and ¹⁵N NMR spectroscopic data and DFT calculations, the E‐isomer of 1‐vinylpyrrole‐2‐carbaldehyde adopts preferable conformation with the anti‐orientation of the vinyl group relative to the carbaldehyde oxime group and with the syn‐arrangement of the carbaldehyde oxime group with reference to the pyrrole ring. This conformation is stabilized by the C? H···N intramolecular hydrogen bond between the α‐hydrogen of the vinyl group and the oxime group nitrogen, which causes a pronounced high‐frequency shift of the α‐hydrogen signal in ¹H NMR (～0.5 ppm) and an increase in the corresponding one‐bond ¹³C–¹H coupling constant (ca 4 Hz). In the Z‐isomer, the carbaldehyde oxime group turns to the anti‐position with respect to the pyrrole ring. The C? H···O intramolecular hydrogen bond between the H‐3 hydrogen of the pyrrole ring and the oxime group oxygen is realized in this case. Due to such hydrogen bonding, the H‐3 hydrogen resonance is shifted to a higher frequency by about 1 ppm and the one‐bond ¹³C–¹H coupling constant for this proton increases by ～5 Hz. Copyright © 2008 John Wiley & Sons, Ltd.     

Conformations of the Nine‐Membered Ring in the B‐Nor‐5,10‐secosteroids. X‐Ray and NMR Analysis

The conformations of (Z)‐ and (E)‐5‐oxo‐B‐nor‐5,10‐secocholest‐1(10)‐en‐3β‐yl acetates ( 2 and 3 , resp.) were examined by a combination of X‐ray crystallographic analysis and NMR spectroscopy, with emphasis on the geometry of the cyclononenone moiety. The ¹H‐ and ¹³C‐NMR spectra showed that the unsaturated nine‐membered ring of (E)‐isomer 3 in C₆D₆ and (D₆)acetone solution exists in a sole conformation of type B ₁ , which is similar to its solid‐state conformation. The (Z)‐isomer 2 in C₆D₆, CDCl₃, and (D₆)acetone solution, however, exists in two conformational forms of different families, with different orientation of the carbonyl group, the predominant form (85%) corresponding to the conformation of type A ₁ and the minor (15%) to the conformation A ₂ present also in the crystalline state. In this solid‐state conformations of the nine‐membered ring of both compounds, the 19‐Me and 5‐oxo groups are ‘β’‐oriented. The NMR analysis suggests that the nine‐membered ring of 4 has a conformation of type C ₁ in CDCl₃ solution.     

Study of spontaneous E/Z isomerization of bis[(Z)‐cyanomethylidene]‐diazapentacyclodienedicarboxylates by 1H, 13C,and 15N NMR spectroscopy,X‐ray,and quantum chemical calculation data

X‐ray data show that the diethyl 6,13‐bis[(Z)‐cyanomethylidene]‐5,5,14,14‐tetramethyl‐4,15‐dioxa‐7,12‐diazapentacyclo[9.5.2.0^2,10.0^3,7.0^12,16]octadeca‐8,17‐diene‐10,17‐dicarboxylate is formed as the ZZ isomer and diastereomer with the (1R*,2R*,3R*,10S*,11R*,12R*,16R*) configuration. The ¹H, ¹³C, and ¹⁵N NMR data exhibit that on standing in chloroform‐d solution, there is a spontaneous isomerization of this compound resulting in a thermodynamically stable mixture of the ZZ, ZE, EE, and EZ isomers with the same backbone. Using the 2D [¹H–¹H] COSY, [¹H–¹³C] HSQC, and [¹H–¹³C, ¹H–¹⁵N] HMBC NMR techniques and quantum chemical calculations makes it possible a complete assignment of signals in the ¹H, ¹³C, and ¹⁵N NMR spectra of each of the isomers. Such isomerization does not occur for similar compounds with the more bulky substituents at the 1,3‐oxazolidine rings. Copyright © 2016 John Wiley & Sons, Ltd.     

Stereospecificity of 1H, 13C and 15N shielding constants in the isomers of methylglyoxal bisdimethylhydrazone: problem with configurational assignment based on 1H chemical shifts

In the ¹³C NMR spectra of methylglyoxal bisdimethylhydrazone, the ¹³C‐5 signal is shifted to higher frequencies, while the ¹³C‐6 signal is shifted to lower frequencies on going from the EE to ZE isomer following the trend found previously. Surprisingly, the ¹H‐6 chemical shift and ¹J(C‐6,H‐6) coupling constant are noticeably larger in the ZE isomer than in the EE isomer, although the configuration around the –CH═N– bond does not change. This paradox can be rationalized by the C–H?N intramolecular hydrogen bond in the ZE isomer, which is found from the quantum‐chemical calculations including Bader's quantum theory of atoms in molecules analysis. This hydrogen bond results in the increase of δ(¹H‐6) and ¹J(C‐6,H‐6) parameters. The effect of the C–H?N hydrogen bond on the ¹H shielding and one‐bond ¹³C–¹H coupling complicates the configurational assignment of the considered compound because of these spectral parameters. The ¹H, ¹³C and ¹⁵N chemical shifts of the 2‐ and 8‐(CH₃)₂N groups attached to the –C(CH₃)═N– and –CH═N– moieties, respectively, reveal pronounced difference. The ab initio calculations show that the 8‐(CH₃)₂N group conjugate effectively with the π‐framework, and the 2‐(CH₃)₂N group twisted out from the plane of the backbone and loses conjugation. As a result, the degree of charge transfer from the N‐2– and N‐8– nitrogen lone pairs to the π‐framework varies, which affects the ¹H, ¹³C and ¹⁵N shieldings. Copyright © 2012 John Wiley & Sons, Ltd.     

Synthesis and isomerization studies of cyclotrisazobiphenyl

We report an efficient synthesis of cyclotris[(E)‐3′‐(biphenyl‐3‐yldiazenyl)] compounds (CTBs). An unsubstituted CTB molecule is accessible in four steps in 10 % yield overall, whereas a hexa(methoxymethyl ether) CTB analogue was prepared in nine steps (26 % yield). The final macrocyclization step was accomplished in up to 80 % yield by using a metal‐template effect. Furthermore, the photochromic properties were investigated, and all four isomers were detected and characterized by NMR spectroscopy. A strong influence from the solvent and the irradiation wavelength on the switching process was observed. Irradiation in pyridine yielded the highest amount of the all‐Z isomer in the photostationary state. For a full conversion to the all‐E isomer, the reaction has to be heated to 45 °C. The isomerization to the all‐E isomer is slow at room temperature, with a half‐life time of the all‐Z isomer of more than nine days in dimethyl sulfoxide (DMSO). Conditions were established to access each possible isomer as the major component in the photostationary state.     

NMR signal assignment of cis/trans‐conformational segments in MEH‐CN‐PPV

Poly[2‐(2′‐ethylhexyloxy)‐5‐methoxy‐1,4‐phenylene‐(1‐cyanovinylene)] MEH‐CN‐PPV and its all‐trans model compound 1,4‐bis(α‐cyanostyryl)‐2‐(2‐ethylhexyloxy)‐5‐methyloxybenzene were synthesized via Knoevenagel condensation. All‐cis isomer and cis–trans isomer of 1,4‐bis(α‐cyanostyryl)‐2‐(2‐ethylhexyloxy)‐5‐methyloxybenzene were prepared by the photoisomerization reaction. Comparison of the ¹H NMR spectra between MEH‐CN‐PPV and three model compounds proved the occurrence of cis‐vinylene in the backbone of MEH‐CN‐PPV. According to the ratio between the cis‐vinylene signal and trans‐vinylene signal, the content of the cis‐vinylene could be estimated to be 15% in MEH‐CN‐PPV. This large cis‐vinylene content came from the rapid photochemical isomerization of cyanovinylene and was likely relative to the poor electroluminescence property of MEH‐CN‐PPV. © 2008 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 46: 1105–1113, 2008     

15N chemical shifts of a series of isatin oxime ethers and their corresponding nitrone isomers

In this article, we describe the characteristic ¹⁵N chemical shifts of isatin oxime ethers and their isomer nitrone. These oxime ethers and nitrones are the alkylation reaction products of isatin oximes. In our study, the ¹⁵N chemical shifts observed in these oxime ethers were in the 402–408 (or 22–28) ppm range, although those for their corresponding nitrone series were in the 280–320 (or ?100 to ?60) ppm range. This remarkable difference in ¹⁵N NMR chemical shift values could potentially be used to determine the O‐ versus N‐alkylation of oximes, even when only one isomer is available. In this paper, the differences in ¹⁵N NMR chemical shifts serve as the basis for a discussion about how to distinguish both regioisomers derived from the oximes alkylation. Copyright © 2010 John Wiley & Sons, Ltd.     

NMR and structure review of some natural furoclerodanes

The structures of some natural occurring furoclerodanes isolated from Croton cajucara were re‐examined using a more powerful NMR instrument (600 MHz for ¹H), 2D NMR experiments, AM1 calculations and ¹H spectrum simulations. This study led to new signal assignments and allowed us to establish the correct structure of the compound named sacacarin, which corresponding to its 20‐oxo‐isomer, is thus renamed iso‐sacacarin. Copyright © 2003 John Wiley & Sons, Ltd.     

NMR analysis of biindenylidenes

The ¹H and ¹³C NMR parameters (chemical shifts and coupling constants) were determined of four biindenylidene isomers, (E)‐2,3,2′,3′‐tetrahydro‐[1,1′]biindenylidene, (Z)‐2,3,2′,3′‐tetrahydro‐[1,1′]biindenylidene, 1,3,1′, 3′‐tetrahydro‐[2,2′]biindenylidene and 2,3,1′,3′‐tetrahydro‐[1,2′]biindenylidene. Copyright © 2003 John Wiley & Sons, Ltd.     

2‐(4′‐Pyridyl‐N‐oxide)‐Substituted Hemithioindigos as Photoresponsive Guests for a Super Aryl‐Extended Calix[4]pyrrole Receptor

We report the synthesis of two 2‐(4′‐pyridyl‐N‐oxide)‐substituted hemithioindigos (HTIs). We probed their photoisomerization by using UV/Vis and ¹H NMR spectroscopy techniques. Light irradiation at λ=450 nm provoked the isomerization of the HTI Z isomer to the E counterpart to a large extent (≈80 % at the photostationary state). ¹H NMR titration experiments revealed the formation of thermodynamically and kinetically stable 1:1 inclusion complexes of the (Z)‐HTI isomers with a super aryl‐extended host (association constant>10⁴ m ^?1). Photoirradiation at λ=450 nm of the inclusion complexes induced the isomerization of the bound HTI N‐oxide to afford the (E)‐HTI?calix[4]pyrrole complex. We determined accurate association constant values for the 1:1 inclusion complexes of the (Z)‐ and (E)‐HTI isomers by using isothermal titration calorimetry experiments. The results showed that the stability constants of the (E)‐HTI complexes were 2.2–2.8‐fold lower than those of the (Z)‐HTI counterparts, which explains the lack of light‐induced release of the former to the bulk solution.     

Configuration and conformation of a novel uridine analogue: 1H and 13C NMR spectra of (5'S)‐1‐[2'‐(2‐hydroxyethyl)tetrahydropyran‐5'‐yl]‐1H‐pyrimidine‐2,4‐dione

A combination of homo‐ and heteronuclear 1D and 2D NMR techniques provided the assignment of the ¹H and ¹³C resonances of the major component of a reaction product consisting of the two possible diastereomers of (5^′S)‐1‐[2^′‐(2‐hydroxyethyl)tetrahydropyran‐5^′‐yl]‐1H‐pyrimidine‐2,4‐dione and showed that the tetrahydropyranyl ring in the major 5^′S,2^′S‐isomer adopts the twist conformation. Copyright © 2002 John Wiley & Sons, Ltd.     

Synthesis and Characterization of the D5h Isomer of the Endohedral Dimetallofullerene Ce2@C80: Two‐Dimensional Circulation of Encapsulated Metal Atoms Inside a Fullerene Cage

Herein we show the synthesis and characterization of the second known Ce₂@C₈₀ isomer. A ¹³C NMR spectroscopic study revealed that the structure of the second isomer has D_5h symmetry. Paramagnetic NMR spectral analysis and theoretical calculation display that the encapsulated Ce atoms circulate two‐dimensionally along a band of ten contiguous hexagons inside a D_5h‐C₈₀ cage, which is in sharp contrast to the three‐dimensional circulation of two Ce atoms in an I_h‐C₈₀ cage. The electronic properties were revealed by means of electrochemical measurements. The D_5h isomer of Ce₂@C₈₀ has a much smaller HOMO–LUMO gap than cluster fullerenes (M₃N@C₈₀, M=Sc, Tm, and Lu) with the same D_5h‐C₈₀ cages. The chemical reactivity was investigated by using disilirane as a chemical probe. The high thermal reactivity toward 1,1,2,2‐tetramesityl‐1,2‐disilirane is consistent with the trends of the redox potentials and the lower LUMO level of the D_5h isomer of Ce₂@C₈₀ compared with that of C₆₀.     

Theoretical and experimental 1H, 13C and 15N NMR studies of N‐alkylation of substituted tetrazolo[1,5‐a]pyridines

The ¹⁵N as well as ¹H and ¹³C chemical shifts of nine substituted tetrazolopyridines and their corresponding tetrazolopyridinium salts have been determined by using NMR spectroscopy at the natural abundance level of all nuclei in CD₃CN. In this paper, we report, for the first time, the N‐alkylation reaction of electron deficient tetrazolopyridines. The treatment of tetrazolopyridines 5–13 with one equivalent of trialkyloxonium tetrafluoroborate leads to a mixture of two isomers, i.e. N3‐ and N2‐alkyl tetrazolo[1,5‐a]pyridinium salts. It has been observed that the N3‐isomer is always the major isomer, except in the case of the CF₃ substituent, where the two isomers are obtained in the same amount. The quaternary tetrazolopyridinium nitrogen N3 is shielded by around 100 ppm (parts per million) with respect to the parent tetrazolopyridine. Experimental data are interpreted by means of density functional theory (DFT) calculations, including solvent‐induced effects, within the conductor‐like polarizable continuum model (CPCM). Good agreements between theoretical and experimental ¹H, ¹³C and ¹⁵N NMR were found. The combination of multinuclear magnetic resonance spectroscopy with gauge including atomic orbital (GIAO) DFT calculations is a powerful tool in the structural elucidation for both neutral and cationic heterocycles and in the determination of the orientation of N‐alkylation of tetrazolopyridines. Copyright © 2009 John Wiley & Sons, Ltd.     

NMR analysis of 6‐(2′,3′‐dihydro‐1′H‐inden‐1′‐yl)‐1H‐indene

¹H, ¹³C and two‐dimensional NMR analyses were applied to determine the NMR parameters of 6‐(2′,3′‐dihydro‐1′H‐inden‐1′‐yl)‐1H‐indene. The measurements were accomplished with 0.5 mg of the substance, this quantity being sufficient to determine the chemical shifts of all the H and C atoms, and also the appropriate coupling constants and to give the complete NMR resonance assignments of the molecule. The predicted patterns of the four different H atoms of the methylene groups of the indane structural element coincided completely with the complex patterns in the NMR spectra. Copyright © 2002 John Wiley & Sons, Ltd.     

Assignment of the E,Z configurational isomers of platinum complexes of N,N‐dialkyl‐N′‐acyl(aroyl)thioureas by means of triple resonance 1H/13C/195Pt PFG correlation NMR spectroscopy

Unsymmetrical, dialkyl‐substituted N,N‐dialkyl‐N^′‐acyl(aroyl)thioureas show E,Z configurational isomerism at room temperature in solution, which is also expressed in the existence of cis‐[Pt(ZZ‐L‐S,O)₂], cis‐[Pt(EZ‐L‐S,O)₂] and cis‐[Pt(EE‐L‐S,O)₂] complexes derived from these ligands. These configurational isomers were assigned by means of a double magnetization transfer ¹H/¹³C/¹⁹⁵Pt correlation NMR experiment, despite the fact that the long‐range ⁵J(¹⁹⁵Pt, ¹H) and ⁴J(¹⁹⁵Pt, ¹³C) scalar couplings are not directly observable in their ¹H and ¹³C spectra at high field. Depending on the ligand structure, the relative amounts of cis‐[Pt(ZZ‐L‐S,O)₂], cis‐[Pt(EZ‐L‐S,O)₂] and cis‐[Pt(EE‐L‐S,O)₂] complexes are in the ranges 40–42% ZZ, 46–47% ZE and 12–13% EE. The cis‐bis[N‐methyl‐N‐(tert‐butyl)‐N^′‐(2,2‐dimethylpropanoyl)thioureato]platinum(II) complex is found to occur exclusively as the ZZ isomer. Copyright © 2003 John Wiley & Sons, Ltd.     

Synthesis and structural characterization of syndiotactic trans‐1,2 and cis‐1,2 polyhexadienes

The (E) isomer in mixtures of (E) and (Z) 1,3‐hexadiene was polymerized with the system CoCl₂(PⁱPrPh₂)₂‐MAO, a highly active and stereospecific catalyst for the preparation of 1,2 syndiotactic polybutadiene. A new crystalline polymer with a melting point of 109 °C was obtained. The polymer was characterized by IR, NMR (¹³C, ¹H in solution and ¹³C in the solid‐state), X‐ray diffraction, DSC, GPC and it was found to have a trans‐1,2 syndiotactic structure with a 5.18 ± 0.04 Å fiber periodicity. Since only the (E) isomer was polymerized, at the end of the reaction we were able to separate the (Z) isomer, which was ultimately polymerized with CpTiCl₃‐MAO at low temperature, obtaining a low molecular weight, stereoregular polymer that, characterized by IR and NMR methods, was found to exhibit a cis‐1,2 syndiotactic structure, never reported before. Molecular mechanics calculations were carried out on the trans‐1,2 syndiotactic polymer and structural models consistent with the X‐ray diffraction data are proposed. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 5339–5353, 2007     

Comparative analysis of 13C shielding constants stereospecificity in the silicon and germanium derivatives of acetylenic aldehyde and ketone oximes based on the 13C NMR spectroscopy and GIAO calculations

In the acetylenic aldehyde oximes with substituents containing silicon and germanium, the ¹³C NMR signal of the C‐2 carbon of triple bond is shifted by 3.5 ppm to lower frequency and that of the C‐3 carbon is moved by 7 ppm to higher frequency on going from E to Z isomer. A greater low‐frequency effect of 5.5 ppm on the C‐2 carbon signal and a greater high‐frequency effect of 11 ppm on the C‐3 carbon signal are observed in the analogous acetylenic ketone oximes. The carbon chemical shift of the C?N bond is larger by 4 ppm in E isomer relative to Z isomer for the aldehyde and ketone oximes. The ²⁹Si chemical shifts in the silicon containing acetylenic aldehyde and ketone oximes are almost the same for the diverse isomers. The trends in changes of the measured chemical shifts are well reproduced by the gauge‐including atomic orbital (GIAO) calculations of the ¹³C and ²⁹Si shielding constants. Copyright © 2009 John Wiley & Sons, Ltd.