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1.
Single‐crystal X‐ray diffraction studies of two terminally protected tetrapeptides Boc‐Ile‐Aib‐Val‐m‐ABA‐OMe ( I ) and Boc‐Ile‐Aib‐Phe‐m‐ABA‐OMe ( II ) (Aib=α‐aminoisobutyric acid; m‐ABA=meta‐aminobenzoic acid) reveal that they form continuous H‐bonded helices through the association of double‐bend (type III and I) building blocks. NMR Studies support the existence of the double‐bend (type III and I) structures of the peptides in solution also. Field emission scanning electron‐microscopic (FE‐SEM) and high‐resolution transmission electron‐microscopic (HR‐TEM) images of the peptides exhibit amyloid‐like fibrils in the solid state. The Congo red‐stained fibrils of peptide I and II , observed between crossed polarizers, show green‐gold birefringence, a characteristic of amyloid fibrils.  相似文献   

2.
For the first time, natural Aβ1–42 fibrils (WT) implicated in Alzheimer's disease, as well as two synthetic mutants forming less toxic amyloid fibrils (L34T) and highly toxic oligomers (oG37C), are chemically characterized at the scale of a single structure using tip‐enhanced Raman spectroscopy (TERS). While the proportion of TERS features associated with amino acid residues is similar for the three peptides, a careful examination of amide I and amide III bands allows us to clearly distinguish WT and L34T fibers organized in parallel β‐sheets from the small and more toxic oG37C oligomers organized in anti‐parallel β‐sheets.  相似文献   

3.
Small oligomers of the amyloid β (Aβ) peptide, rather than the monomers or the fibrils, are suspected to initiate Alzheimer′s disease (AD). However, their low concentration and transient nature under physiological conditions have made structural investigations difficult. A method for addressing such problems has been developed by combining rapid fluorescence techniques with slower two‐dimensional solid‐state NMR methods. The smallest Aβ40 oligomers that demonstrate a potential sign of toxicity, namely, an enhanced affinity for cell membranes, were thus probed. The two hydrophobic regions (residues 10–21 and 30–40) have already attained the conformation that is observed in the fibrils. However, the turn region (residues 22–29) and the N‐terminal tail (residues 1–9) are strikingly different. Notably, ten of eleven known Aβ mutants that are linked to familial AD map to these two regions. Our results provide potential structural cues for AD therapeutics and also suggest a general method for determining transient protein structures.  相似文献   

4.
The (3′→2′)‐phosphodiester glyceric acid backbone containing an acyclic oligomer tagged with 2,4‐disubstituted pyrimidines as alternative recognition elements have been synthesized. Strong cross‐pairing of a 2,4‐dioxo‐5‐aminopyrimidine hexamer, rivaling locked nucleic acid (LNA) and peptide nucleic acid (PNA), with complementary adenine‐containing DNA and RNA sequences was observed. The corresponding 2,4‐diamino‐ and 2‐amino‐4‐oxo‐5‐aminopyrimidine‐tagged oligomers were synthesized, but difficulties in deprotection, purification, and isolation thwarted further investigations. The acyclic phosphate backbone structure of the protected oligomer seems to be prone to an eliminative degradation owing to the acidic hydrogen at the 2′‐position—an arrangement that renders the oligomer vulnerable to the conditions used for the removal of the protecting groups on the heterocyclic recognition element. However, the free oligomers seem to be stable under the conditions investigated.  相似文献   

5.
Understanding the structure of amyloid‐β (Aβ) aggregates is a key step towards elucidating the pathology of Alzheimer’s disease. In this work, three fragments of the Aβ1–42 protein, Aβ1–25 (DAEFRHDSGYEVHHQKLVFFAEDVG), Aβ25–35 (GSNKGAIIGLM), and Aβ33–42 (GLMVGGVVIA), were synthesized, and their aggregated structures were examined by linear infrared spectroscopy in the amide‐I (mainly the C?O stretching) region. The structures of the formed aggregates were found to be both sequence and pH dependent. The results suggest that instead of forming matured fibrils, as in the case of full‐length Aβ1–42, both Aβ1–25 and Aβ33–42 form a mixture of threadlike β‐sheet fibril, soluble β‐sheet oligomer, and random coil structures. The β‐sheet conformations were found to be mainly antiparallel for the former and both parallel and antiparallel for the latter. However, the Aβ25–35 fragment was found to form assembled fibrils containing predominantly parallel β‐sheets. The conformation and morphology of the aggregates were also confirmed by circular dichroism measurements and transmission electron microscopy. Factors influencing the structures of the aggregates formed by the Aβ fragments were discussed.  相似文献   

6.
The structures of seven A2Cu4X10 compounds containing quasi‐planar oligomers are reported: bis(1,2,4‐trimethylpyridinium) hexa‐μ‐chlorido‐tetrachloridotetracuprate(II), (C8H12N)2[Cu4Cl10], (I), and the hexa‐μ‐bromido‐tetrabromidotetracuprate(II) salts of 1,2,4‐trimethylpyridinium, (C8H12N)2[Cu4Br10], (II), 3,4‐dimethylpyridinium, (C7H10N)2[Cu4Br10], (III), 2,3‐dimethylpyridinium, (C7H10N)2[Cu4Br10], (IV), 1‐methylpyridinium, (C6H8N)2[Cu4Br10], (V), trimethylphenylammonium, (C9H14N)2[Cu4Br10], (VI), and 2,4‐dimethylpyridinium, (C7H10N)2[Cu4Br10], (VII). The first four are isomorphous and contain stacks of tetracopper oligomers aggregated through semicoordinate Cu...X bond formation in a 4(,) stacking pattern. The 1‐methylpyridinium salt also contains oligomers stacked in a 4(,) pattern, but is isomorphous with the known chloride analog instead. The trimethylphenylammonium salt contains stacks of oligomers arranged in a 4(,) stacking pattern similar to the tetramethylphosphonium analog. These six structures feature inversion‐related organic cation pairs and hybrid oligomer/organic cation layers derived from the parent CuX2 structure. The 2,4‐dimethylpyridinium salt is isomorphous with the known (2‐amino‐4‐methylpyridinium)2Cu4Cl10 structure, in which isolated stacks of organic cations and of oligomers in a 4(,) pattern are found. In bis(3‐chloro‐1‐methylpyridinium) octa‐μ‐bromido‐tetrabromidopentacuprate(II), (C6H7ClN)[Cu5Br12], (VIII), containing the first reported fully halogenated quasi‐planar pentacopper oligomer, the oligomers stack in a 5(,) stacking pattern as the highest nuclearity [CunX2n+2]2− oligomer compound known with isolated stacking. Bis(2‐chloro‐1‐methylpyridinium) dodeca‐μ‐bromido‐tetrabromidoheptacuprate(II), (C6H7ClN)2[Cu7Br16], (IX), contains the second heptacopper oligomer reported and consists of layers of interleaved oligomer stacks with a 7[(,)][(−,−)] pattern isomorphous with that of the known 1,2‐dimethylpyridinium analog. All the oligomers reported here are inversion symmetric.  相似文献   

7.
α‐Synuclein (α‐Syn) aggregation is associated with Parkinson's disease (PD) pathogenesis. In PD, the role of oligomers versus fibrils in neuronal cell death is debatable, but recent studies suggest oligomers are a proximate neurotoxin. Herein, we show that soluble α‐Syn monomers undergo a transformation from a solution to a gel state on incubation at high concentration. Detailed characterization of the gel showed the coexistence of monomers, oligomers, and short fibrils. In vitro, the gel was highly cytotoxic to human neuroblastoma cells. The individual constituents of the gel are short‐lived species but toxic to the cells. They comprise a structurally heterogeneous population of α‐helical and β‐sheet‐rich oligomers and short fibrils with the cross‐β motif. Given the recent evidence of the gel‐like state of the protein associated with neurodegenerative diseases, the gel state of α‐Syn in this study represents a mechanistic and structural model for the in vivo toxicity of α‐Syn in PD.  相似文献   

8.
The 73/27 4‐hydroxybenzoic acid (HBA)/2‐hydroxy‐6‐naphthoic acid (HNA) copolyester was prepared by the inclusion of two crosslinkable oligomers. These systems were synthesized by melt polymerization and characterized using differential scanning calorimetry, thermogravimetric analysis, polarized optical microscope and wide‐angle X‐ray diffraction. The transition from thermoplastic to thermosetting character occurred when 10 wt% or above of oligomer was added to the 73/27 HBA/HNA random mixture. The melt rheology of the HBA/HNA copolyesters containing two oligomers was investigated. The copolyesters displayed an increase in complex viscosity and transition from liquid‐like to solid‐like behavior as the oligomer content increased, and finally there was no melting transition when the oligomer content reached 10 wt%. Shear storage modulus measured by a dielectric mechanical analysis decreased slightly with increasing oligomer content. An adhesive test using an aluminum sheet revealed an increase in the lap shear strength up to 5 wt% of oligomer content without a significant reduction in shear storage modulus. On the other hand, the 73/27 HBA/HNA containing 10 wt% oligomer displayed a dramatic decrease in lap shear strength. Copyright © 1999 John Wiley & Sons, Ltd.  相似文献   

9.
Cyclic homologated amino acids are important building blocks for the construction of helical foldamers. N‐aminoazetidine‐2‐carboxylic acid (AAzC), an aza analogue of trans‐2‐aminocyclobutanecarboxylic acid (tACBC), displays a strong hydrazino turn conformational feature, which is proposed to act as an 8‐helix primer. tACBC oligomers bearing a single N‐terminal AAzC residue were studied to evaluate the ability of AAzC to induce and support an 8‐helix along the oligopeptide length. While tACBC homooligomers assume a dominant 12‐helix conformation, the aza‐primed oligomers preferentially adopt a stabilized 8‐helix conformation for an oligomer length up to 6 residues. The (formal) single‐atom exchange at the N terminus of a tACBC oligomer thus contributes to the sustainability of the 8‐helix, which resists the switch to a 12‐helix. This effect illustrates atomic‐level programmable design for fine tuning of peptide foldamer architectures.  相似文献   

10.
A new strategy is developed to prepare both α,ω‐dithiol and α,ω‐divinyl linear telechelic polythiolether oligomers by visible light induced thiol‐ene chemistry in the presence of a fac‐Ir(ppy)3 photoredox catalyst. Polythiolether oligomers of well‐defined end groups and controlled molecular weights have been successfully synthesized at varying monomer molar ratios of 1,4‐benzenedimethanethiol (BDMT) to diethylene glycol divinyl ether (DEGVE). 1H NMR and MALDI‐TOF MS analyses demonstrate that as‐prepared polythiolethers possess high end‐group fidelity, which is further supported by the successful polyaddition of polythiolethers bearing α,ω‐dithiol and α,ω‐divinyl groups. For example, with the α,ω‐dithiol‐ (Mn = 1900 g mol?1, PDI = 1.25) and α,ω‐divinyl‐terminated (Mn = 2000 g mol?1, PDI = 1.29) polythiolethers as macromonomers, the molecular weight of resulting polythiolether is up to 7700 g mol?1 with PDI as 1.67. The reactivity of the terminal thiol group is further confirmed by the addition reaction with N‐(1‐pyrenyl)maleimide. UV‐vis spectra and fluorescene measurements suggest that fac‐Ir(ppy)3 undergo a redox quenching process reacted with BDMT to generate thiyl free radicals. With these results, the mechanism of the thiol‐ene reaction catalyzed by photoredox catalyst is proposed. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2016 , 54, 740–749  相似文献   

11.
Structural variation of α‐synuclein (αSyn) fibrils has been linked to the diverse etiologies of synucleinopathies. However, little is known about what specific mechanism provides αSyn fibrils with pathologic features. Herein, we demonstrate Cu(II)‐based supramolecular approach for unraveling the formation process of pathogenic αSyn fibrils and its application in a neurotoxic mechanism study. The conformation of αSyn monomer was strained by macrochelation with Cu(II), thereby disrupting the fibril elongation while promoting its nucleation. This non‐canonical process formed shortened, β‐sheet enriched αSyn fibrils (<0.2 μm) that were rapidly transmitted and accumulated to neuronal cells, causing neuronal cell death, in sharp contrast to typical αSyn fibrils (ca. 1 μm). Our approach provided the supramolecular basis for the formation of pathogenic fibrils through physiological factors, such as brain Cu(II).  相似文献   

12.
Highly purified chitooligomers with single degree of polymerization are of significance for studying bioactivity of chitooligomers. However, there are few reports on high‐resolution preparative separation of chitooligomers, especially for those oligomers with degree of polymerization higher than 4. This study developed a high‐resolution chromatography for the preparative separation of a pure fully deacetylated chitooligomer series. A glucosamine oligomer mixture with low degree of polymerization was prepared by acid hydrolysis of a highly deacetylated chitosan. Then, six fractions were separated from the prepared oligomer mixture by ion‐exchange chromatography and analyzed by HPLC and ESI/MS, which primarily contained glucosamine dimers, trimers, tetramers, pentamers, hexamers, and heptamers, respectively, with chromatographic purities over 98% for dimers to hexamers and a purity of 93% for heptamers. The yields of a single round of separation were 75, 60, 60, 55, 35, and 20 mg for glucosamine dimers, trimers, tetramers, pentamers, hexamers, and heptamers, respectively. Furthermore, a chromatographic separation model for GlcN homomers was established. The capacity factor (k) of glucosamine oligomers and their degrees of polymerization (DPs) exhibited a good correlation, lnk = 0.786 + 0.846 lnDP, (R2 = 0.997). Based on this equation, glucosamine octamers are expected to be separated by this system.  相似文献   

13.
2,5‐Diethoxy‐1,4‐bis[(trimethylsilyl)ethynyl]benzene, C20H30O2Si2, (I), constitutes one of the first structurally characterized examples of a family of compounds, viz. the 2,5‐dialkoxy‐1,4‐bis[(trimethylsilyl)ethynyl]benzene derivatives, used in the preparation of oligo(phenyleneethynylene)s via Pd/Cu‐catalysed cross‐coupling. 2,5‐Diethoxy‐1,4‐diethynylbenzene, C14H14O2, (II), results from protodesilylation of (I). 1,4‐Diethynyl‐2,5‐bis(heptyloxy)benzene, C24H34O2, (III), is a long alkyloxy chain analogue of (II). The molecules of compounds (I)–(III) are located on sites with crystallographic inversion symmetry. The large substituents either in the alkynyl group or in the benzene ring have a marked effect on the packing and intermolecular interactions of adjacent molecules. All the compounds exhibit weak intermolecular interactions that are only slightly shorter than the sum of the van der Waals radii of the interacting atoms. Compound (I) displays C—H...π interactions between the methylene H atoms and the acetylenic C atom. Compound (II) shows π–π interactions between the acetylenic C atoms, complemented by C—H...π interactions between the methyl H atoms and the acetylenic C atoms. Unlike (I) or (II), compound (III) has weak nonclassical hydrogen‐bond‐type interactions between the acetylenic H atoms and the ether O atoms.  相似文献   

14.
After reporting the structure of a new polymorph of 1,3,5‐trifluoro‐2,4,6‐triiodobenzene (denoted BzF3I3 ), C6F3I3, (I), which crystallized in the space group P 21/c , we perform a comparative analysis with the already reported P 21/n polymorph, (II) [Reddy et al. (2006). Chem. Eur. J. 12 , 2222–2234]. In polymorph (II), type‐II I…I halogen bonds and I…π interactions connect molecules in such a way that a three‐dimensional structure is formed; however, the way in which molecules are connected in polymorph (I), through type‐II I…I halogen bonds and π–π interactions, gives rise to an exfoldable lamellar structure, which looks less tightly bound than that of (II). In agreement with this structural observation, both the melting point and the melting enthalpy of (I) are lower than those of (II).  相似文献   

15.
Isatin (1H‐indole‐2,3‐dione) derivatives represent synthetically useful substrates which can be used to prepare a broad range of heterocyclic compounds. In the title compounds, C18H17NO5, (I), and C15H10FNO2, (II), the isatin ring systems are planar and form a dihedral angle of 73.04 (7)° in (I) and 76.82 (11)° in (II) with the benzyl groups. The bicyclic scaffolds in both compounds are almost superimposable, with an r.m.s. deviation of 0.061 Å. The crystal structures of both derivatives are stabilized by C—H...O interactions. These contacts generate an R12(7) ring motif in (I) and a C(7) chain motif in (II).  相似文献   

16.
rac‐5‐Diphenylacetyl‐2,2,4‐trimethyl‐2,3,4,5‐tetrahydro‐1,5‐benzothiazepine, C26H27NOS, (I), and rac‐5‐formyl‐2,2,4‐trimethyl‐2,3,4,5‐tetrahydro‐1,5‐benzothiazepine, C13H17NOS, (II), are both characterized by a planar configuration around the heterocyclic N atom. In contrast with the chair conformation of the parent benzothiazepine, which has no substituents at the heterocyclic N atom, the seven‐membered ring adopts a boat conformation in (I) and a conformation intermediate between boat and twist‐boat in (II). The molecules lack a symmetry plane, indicating distortions from the perfect boat or twist‐boat conformations. The supramolecular architectures are significantly different, depending in (I) on C—H...O interactions and intermolecular S...S contacts, and in (II) on a single aromatic π–π stacking interaction.  相似文献   

17.
Five fluorene‐based co‐oligomers have been prepared to study their self‐assembly in a wide range of concentrations, from dilute solutions to the solid state. Subtle changes to the chemical structures, introduced to tune the emission colours over the entire visible range, induce strong differences in aggregation behaviour. Only two of the fluorescent co‐oligomer derivatives self‐assemble to form soluble fibrils from which fluorescent organogels emerge at higher concentrations. In contrast, the other compounds form precipitates. Mixed fluorescent co‐oligomer systems exhibit partial energy transfer, which allows the creation of white‐light‐emitting gels. Finally, a mechanism for the hierarchical self‐assembly of this class of materials is proposed based on experimental results and molecular modelling calculations.  相似文献   

18.
The title compounds, C8H10O2, (I), and C12H14O2, (II), occurred as by‐products in the controlled synthesis of a series of bis­(gem‐alkynols), prepared as part of an extensive study of synthon formation in simple gem‐alkynol derivatives. The two 4‐(gem‐alkynol)‐1‐ones crystallize in space group P21/c, (I) with Z′ = 1 and (II) with Z′ = 2. Both structures are dominated by O—H?O=C hydrogen bonds, which form simple chains in the cyclo­hexane derivative, (I), and centrosymmetric dimers, of both symmetry‐independent mol­ecules, in the cyclo­hexa‐2,5‐diene, (II). These strong synthons are further stabilized by C[triple‐bond]C—H?O=C, Cmethylene—H?O(H) and Cmethyl—H?O(H) interactions. The direct intermolecular interactions between donors and acceptors in the gem‐alkynol group, which characterize the bis­(gem‐alkynol) analogues of (I) and (II), are not present in the ketone derivatives studied here.  相似文献   

19.
A new polymorph (denoted polymorph II) of 3‐acetyl‐4‐hydroxy‐2H‐chromen‐2‐one, C11H8O4, was obtained unexpectedly during an attempt to recrystallize the compound from salt–melted ice, and the structure is compared with that of the original polymorph (denoted polymorph I) [Lyssenko & Antipin (2001). Russ. Chem. Bull. 50 , 418–431]. Strong intramolecular O—H...O hydrogen bonds are observed equally in the two polymorphs [O...O = 2.4263 (13) Å in polymorph II and 2.442 (1) Å in polymorph I], with a slight delocalization of the hydroxy H atom towards the ketonic O atom in polymorph II [H...O = 1.32 (2) Å in polymorph II and 1.45 (3) Å in polymorph I]. In both crystal structures, the packing of the molecules is dominated and stabilized by weak intermolecular C—H...O hydrogen bonds. Additional π–π stacking interactions between the keto–enol hydrogen‐bonded rings stabilize polymorph I [the centres are separated by 3.28 (1) Å], while polymorph II is stabilized by interactions between α‐pyrone rings, which are parallel to one another and separated by 3.670 (5) Å.  相似文献   

20.
The Schiff base enaminones (3Z)‐4‐(5‐ethylsulfonyl‐2‐hydroxyanilino)pent‐3‐en‐2‐one, C13H17NO4S, (I), and (3Z)‐4‐(5‐tert‐butyl‐2‐hydroxyanilino)pent‐3‐en‐2‐one, C15H21NO2, (II), were studied by X‐ray crystallography and density functional theory (DFT). Although the keto tautomer of these compounds is dominant, the O=C—C=C—N bond lengths are consistent with some electron delocalization and partial enol character. Both (I) and (II) are nonplanar, with the amino–phenol group canted relative to the rest of the molecule; the twist about the N(enamine)—C(aryl) bond leads to dihedral angles of 40.5 (2) and −116.7 (1)° for (I) and (II), respectively. Compound (I) has a bifurcated intramolecular hydrogen bond between the N—H group and the flanking carbonyl and hydroxy O atoms, as well as an intermolecular hydrogen bond, leading to an infinite one‐dimensional hydrogen‐bonded chain. Compound (II) has one intramolecular hydrogen bond and one intermolecular C=O...H—O hydrogen bond, and consequently also forms a one‐dimensional hydrogen‐bonded chain. The DFT‐calculated structures [in vacuo, B3LYP/6‐311G(d,p) level] for the keto tautomers compare favourably with the X‐ray crystal structures of (I) and (II), confirming the dominance of the keto tautomer. The simulations indicate that the keto tautomers are 20.55 and 18.86 kJ mol−1 lower in energy than the enol tautomers for (I) and (II), respectively.  相似文献   

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