Excited‐State Hydrogen Bonding Strengthening and Weakening with Intramolecular Charge Transfer in Resorufin‐Water Complexes: A TD‐DFT Study

The geometric structures, infrared spectra and hydrogen bond binding energies of the various hydrogen‐bonded Res^?‐water complexes in states S0 and S1 have been calculated using the density functional theory (DFT) and time‐dependent density functional theory (TD‐DFT) methods, respectively. Based on the changes of the hydrogen bond lengths and binding energies as well as the spectral shifts of the vibrational mode of the hydroxyl groups, it is demonstrated that hydrogen bonds HB‐II, HB‐III and HB‐IV are strengthened while hydrogen bond HB‐I is weakened in the four singly hydrogen‐bonded Res^?‐Water complexes upon photoexcitation. When the four hydrogen bonds are formed simultaneously between one resorufin anion and four water molecules in the Res^?‐4Water complex, all the hydrogen bonds are weakened in both the ground and excited states compared with those in the corresponding singly hydrogen‐bonded Res^?‐Water complexes. Furthermore, in complex Res^?‐4Water, hydrogen bonds HB‐II and HB‐IV are strengthened while hydrogen bonds HB‐I and HB‐III are weakened after the electronic excitation. The hydrogen bond strengthening and weakening in the various hydrogen‐bonded Res^?‐water complexes should be due to the redistribution of the charges among the four heteroatoms (O_1‐3 and N₁) within the resorufin molecule upon the optical excitation.     

Hydrogen‐Bonded Liquid Crystalline Materials: Supramolecular Polymeric Assembly and the Induction of Dynamic Function

Liquid crystals are molecular materials that combine anisotropy with dynamic nature. Recently, the use of hydrogen bonding for the design of functional liquid crystalline materials has been shown to be a versatile approach toward the control of simple molecularly assembled structures and the induction of dynamic function. A variety of hydrogen‐bonded liquid crystals has been prepared by molecular self‐assembly processes via hydrogen bond formation. Rod‐like and disk‐like low‐molecular weight complexes and polymers with side‐chain, main‐chain, network, and guest‐host structures have been built by the complexation of complimentary and identical hydrogen‐bonded molecules. These materials consist of closed‐type hydrogen bondings. Another type of hydrogen‐bonded liquid crystals consists of open‐type hydrogen bonding. In this case, the introduction of hydrogen bonding moieties, such as hydroxyl groups, induces microphase segregation leading to liquid crystalline molecular order. Moreover, liquid crystalline physical gels have been prepared by the molecular aggregation of hydrogen‐bonded molecules in non‐hydrogen‐bonded liquid crystals. They show significant electrooptical properties. An anisotropic gel is a new type of anisotropic materials forming heterogeneous structures.     

Tetraalkylammonium Salts as Hydrogen‐Bonding Catalysts

Although the hydrogen‐bonding ability of the α hydrogen atoms on tetraalkylammonium salts is often discussed with respect to phase‐transfer catalysts, catalysis that utilizes the hydrogen‐bond‐donor properties of tetraalkylammonium salts remains unknown. Herein, we demonstrate hydrogen‐bonding catalysis with newly designed tetraalkylammonium salt catalysts in Mannich‐type reactions. The structure and the hydrogen‐bonding ability of the new ammonium salts were investigated by X‐ray diffraction analysis and NMR titration studies.     

Time‐dependent density functional theory study on the electronic excited‐state geometric structure,infrared spectra,and hydrogen bonding of a doubly hydrogen‐bonded complex

The geometric structures and infrared (IR) spectra in the electronically excited state of a novel doubly hydrogen‐bonded complex formed by fluorenone and alcohols, which has been observed by IR spectra in experimental study, are investigated by the time‐dependent density functional theory (TDDFT) method. The geometric structures and IR spectra in both ground state and the S₁ state of this doubly hydrogen‐bonded FN‐2MeOH complex are calculated using the DFT and TDDFT methods, respectively. Two intermolecular hydrogen bonds are formed between FN and methanol molecules in the doubly hydrogen‐bonded FN‐2MeOH complex. Moreover, the formation of the second intermolecular hydrogen bond can make the first intermolecular hydrogen bond become slightly weak. Furthermore, it is confirmed that the spectral shoulder at around 1700 cm^?1 observed in the IR spectra should be assigned as the doubly hydrogen‐bonded FN‐2MeOH complex from our calculated results. The electronic excited‐state hydrogen bonding dynamics is also studied by monitoring some vibraitonal modes related to the formation of hydrogen bonds in different electronic states. As a result, both the two intermolecular hydrogen bonds are significantly strengthened in the S₁ state of the doubly hydrogen‐bonded FN‐2MeOH complex. The hydrogen bond strengthening in the electronically excited state is similar to the previous study on the singly hydrogen‐bonded FN‐MeOH complex and play important role on the photophysics of fluorenone in solutions. © 2009 Wiley Periodicals, Inc. J Comput Chem 2009     

Redox‐Controlled Hydrogen Bonding: Turning a Superbase into a Strong Hydrogen‐Bond Donor

Herein the synthesis, structures and properties of hydrogen‐bonded aggregates involving redox‐active guanidine superbases are reported. Reversible hydrogen bonding is switched on by oxidation of the hydrogen‐donor unit, and leads to formation of aggregates in which the hydrogen‐bond donor unit is sandwiched by two hydrogen‐bond acceptor units. Further oxidation (of the acceptor units) leads again to deaggregation. Aggregate formation is associated with a distinct color change, and the electronic situation could be described as a frozen stage on the way to hydrogen transfer. A further increase in the basicity of the hydrogen‐bond acceptor leads to deprotonation reactions.     

Time‐dependent density functional theory study on the electronic excited‐state hydrogen‐bonding dynamics of 4‐aminophthalimide (4AP) in aqueous solution: 4AP and 4AP–(H2O)1,2 clusters

The time‐dependent density functional theory (TDDFT) method has been carried out to investigate the excited‐state hydrogen‐bonding dynamics of 4‐aminophthalimide (4AP) in hydrogen‐donating water solvent. The infrared spectra of the hydrogen‐bonded solute?solvent complexes in electronically excited state have been calculated using the TDDFT method. We have demonstrated that the intermolecular hydrogen bond C? O···H? O and N? H···O? H in the hydrogen‐bonded 4AP?(H₂O)₂ trimer are significantly strengthened in the electronically excited state by theoretically monitoring the changes of the bond lengths of hydrogen bonds and hydrogen‐bonding groups in different electronic states. The hydrogen bonds strengthening in the electronically excited state are confirmed because the calculated stretching vibrational modes of the hydrogen bonding C?O, amino N? H, and H? O groups are markedly red‐shifted upon photoexcitation. The calculated results are consistent with the mechanism of the hydrogen bond strengthening in the electronically excited state, while contrast with mechanism of hydrogen bond cleavage. Furthermore, we believe that the transient hydrogen bond strengthening behavior in electroniclly excited state of chromophores in hydrogen‐donating solvents exists in many other systems in solution. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2010     

Density Functional Theory Study of Hydrogen Adsorption in a Ti‐Decorated Mg‐Based Metal–Organic Framework‐74

The Ti‐binding energy and hydrogen adsorption energy of a Ti‐decorated Mg‐based metal–organic framework‐74 (Mg‐MOF‐74) were evaluated by using first‐principles calculations. Our results revealed that only three Ti adsorption sites were found to be stable. The adsorption site near the metal oxide unit is the most stable. To investigate the hydrogen‐adsorption properties of Ti‐functionalized Mg‐MOF‐74, the hydrogen‐binding energy was determined. For the most stable Ti adsorption site, we found that the hydrogen adsorption energy ranged from 0.26 to 0.48 eV H₂^?1. This is within the desirable range for practical hydrogen‐storage applications. Moreover, the hydrogen capacity was determined by using ab initio molecular dynamics simulations. Our results revealed that the hydrogen uptake by Ti‐decorated Mg‐MOF‐74 at temperatures of 77, 150, and 298 K and ambient pressure were 1.81, 1.74, and 1.29 H₂ wt %, respectively.     

Low‐Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad

The position, bonding and dynamics of hydrogen atoms in the catalytic centers of proteins are essential for catalysis. The role of short hydrogen bonds in catalysis has remained highly debated and led to establishment of several distinctive geometrical arrangements of hydrogen atoms vis‐à‐vis the heavier donor and acceptor counterparts, that is, low‐barrier, single‐well or short canonical hydrogen bonds. Here we demonstrate how the position of a hydrogen atom in the catalytic triad of an aminoglycoside inactivating enzyme leads to a thirty‐fold increase in catalytic turnover. A low‐barrier hydrogen bond is present in the enzyme active site for the substrates that are turned over the best, whereas a canonical hydrogen bond is found with the least preferred substrate. This is the first comparison of these hydrogen bonds involving an identical catalytic network, while directly demonstrating how active site electrostatics adapt to the electronic nature of substrates to tune catalysis.     

Lithium‐Doped Silica‐Rich MIL‐101(Cr) for Enhanced Hydrogen Uptake

Metal‐organic frameworks (MOFs) show promising characteristics for hydrogen storage application. In this direction, modification of under‐utilized large pore cavities of MOFs has been extensively explored as a promising strategy to further enhance the hydrogen storage properties of MOFs. Here, we described a simple methodology to enhance the hydrogen uptake properties of RHA incorporated MIL‐101 (RHA‐MIL‐101, where RHA is rice husk ash—a waste material) by controlled doping of Li⁺ ions. The hydrogen gas uptake of Li‐doped RHA‐MIL‐101 is significantly higher (up to 72 %) compared to the undoped RHA‐MIL‐101, where the content of Li⁺ ions doping greatly influenced the hydrogen uptake properties. We attributed the observed enhancement in the hydrogen gas uptake of Li‐doped RHA‐MIL‐101 to the favorable Li⁺ ion‐to‐H₂ interactions and the cooperative effect of silanol bonds of silica‐rich rice‐husk ash incorporated in MIL‐101.     

A polarizable dipole–dipole interaction model for evaluation of the interaction energies for NH···OC and CH···OC hydrogen‐bonded complexes

In this article, a polarizable dipole–dipole interaction model is established to estimate the equilibrium hydrogen bond distances and the interaction energies for hydrogen‐bonded complexes containing peptide amides and nucleic acid bases. We regard the chemical bonds N? H, C?O, and C? H as bond dipoles. The magnitude of the bond dipole moment varies according to its environment. We apply this polarizable dipole–dipole interaction model to a series of hydrogen‐bonded complexes containing the N? H···O?C and C? H···O?C hydrogen bonds, such as simple amide‐amide dimers, base‐base dimers, peptide‐base dimers, and β‐sheet models. We find that a simple two‐term function, only containing the permanent dipole–dipole interactions and the van der Waals interactions, can produce the equilibrium hydrogen bond distances compared favorably with those produced by the MP2/6‐31G(d) method, whereas the high‐quality counterpoise‐corrected (CP‐corrected) MP2/aug‐cc‐pVTZ interaction energies for the hydrogen‐bonded complexes can be well‐reproduced by a four‐term function which involves the permanent dipole–dipole interactions, the van der Waals interactions, the polarization contributions, and a corrected term. Based on the calculation results obtained from this polarizable dipole–dipole interaction model, the natures of the hydrogen bonding interactions in these hydrogen‐bonded complexes are further discussed. © 2013 Wiley Periodicals, Inc.     

Isolation of a Hydrogen‐Bonded Complex Based on the Anthranol/Anthroxyl Pair: Formation of a Hydrogen‐Atom Self‐Exchange System

A hydrogen‐bonded complex was successfully isolated as crystals from the anthranol/anthroxyl pair in the self‐exchange proton‐coupled electron transfer (PCET) reaction. The anthroxyl radical was stabilized by the introduction of a 9‐anthryl group at the carbon atom at the 10‐position. The hydrogen‐bonded complex with anthranol self‐assembled by π–π stacking to form a one‐dimensional chain in the crystal. The conformation around the hydrogen bond was similar to that of the theoretically predicted PCET activated complex of the phenol/phenoxyl pair. X‐ray crystal analyses revealed the self‐exchange of a hydrogen atom via the hydrogen bond, indicating the activation of the self‐exchange PCET reaction between anthranol and anthroxyl. Magnetic measurements revealed that magnetic ordering inside the one‐dimensional chain caused the inactivation of the self‐exchange reaction.     

Chemical and Physical Solutions for Hydrogen Storage

Hydrogen is a promising energy carrier in future energy systems. However, storage of hydrogen is a substantial challenge, especially for applications in vehicles with fuel cells that use proton‐exchange membranes (PEMs). Different methods for hydrogen storage are discussed, including high‐pressure and cryogenic‐liquid storage, adsorptive storage on high‐surface‐area adsorbents, chemical storage in metal hydrides and complex hydrides, and storage in boranes. For the latter chemical solutions, reversible options and hydrolytic release of hydrogen with off‐board regeneration are both possible. Reforming of liquid hydrogen‐containing compounds is also a possible means of hydrogen generation. The advantages and disadvantages of the different systems are compared.     

Synthesis of Structurally Varied 1,3‐Disiloxanediols and Their Activity as Anion‐Binding Catalysts

A series of new 1,3‐disiloxanediols has been synthesized, including naphthyl‐substituted and unsymmetrical siloxanes, and demonstrated as a new class of anion‐binding catalysts. In the absence of anions, diffusion‐ordered spectroscopy (DOSY) displays self‐association of 1,3‐disiloxanediols through hydrogen‐bonding interactions. Binding constants determined for 1,3‐disiloxanediol catalysts indicate strong hydrogen‐bonding and anion‐binding abilities with unsymmetrical siloxanes displaying different hydrogen‐bonding abilities for each silanol group.     

Transannular Hydrogen Bonding in Planar‐Chiral [2.2]Paracyclophane‐Bisamides

A series of [2.2]paracyclophane‐bisamide regioisomers and alkylated comparators were designed, synthesized, and characterized in order to better understand the transannular hydrogen bonding of [2.2]paracyclophane‐based molecular recognition units. X‐Ray crystallography shows that transannular hydrogen bonding is maintained in the solid‐state, but no stereospecific self‐recognition is observed. The assignment of both transannularly and intermolecularly hydrogen bonded N?H stretches could be made by infrared spectroscopy, and the effect of transannular hydrogen bonding on amide bond rotation dynamics is observed by ¹H‐NMR in nonpolar solvents. The consequences of transannular hydrogen bonding on the optical properties of [2.2]paracyclophane is observed by comparing alkylated and non‐alkylated pseudo‐ortho 4,12‐[2.2]paracyclophane‐bisamides. Finally, optical resolution of 4‐mono‐[2.2]paracyclophane and pseudo‐ortho 4,12‐[2.2]paracyclophane‐bisamides was achieved through the corresponding sulfinyl diastereoisomers for circular dichroism studies. Transannular hydrogen bonding in [2.2]paracyclophane‐amides allows preorganization for self‐complementary intermolecular assembly, but is weak enough to allow rapid rotation of the amides even in nonpolar solvents.     

A pseudo‐quadruple hydrogen‐bonding motif consisting of six N—H⋯O hydrogen bonds in trimethoprim formate

The title compound, trimethoprim (TMP) formate [systematic name: 2,4‐di­amino‐5‐(3,4,5‐tri­methoxy­benzyl)­pyrimidin‐1‐ium formate], C₁₄H₁₉N₄O₃⁺·CHO₂^?, reveals a pseudo‐quadruple hydrogen‐bonding motif consisting of six N—H?O hydrogen bonds involving two unpaired TMP cations and two formate anions which are symmetrically disposed. The hydrogen‐bonding motif is strikingly comparable with that observed in other TMP salts where the amino­pyrimidine moieties of the TMP cations are centrosymmetrically paired. These conserved hydrogen‐bonding motifs may serve as robust synthons in crystal engineering and design. The characteristic pseudo‐quadruple hydrogen‐bonding motif and other intermolecular hydrogen bonds operating in the crystal form a two‐dimensional supramolecular sheet structure.     

Hydrogen‐Bonding in Aminocatalysis: From Proline and Beyond

This Concept article summarizes recent progress in the field of hydrogen‐bonding aminocatalysis using proline‐derived systems. The aminocatalysts available in the literature are categorized by the incorporated hydrogen‐bonding scaffold and its mode of recognition. Both mono‐ and double‐hydrogen‐bonding motifs are discussed and examples of their application in asymmetric synthesis are given.     

A multidimensional gas chromatography method for the analysis of hydrogen sulfide in crude oil and crude oil headspace

Two‐dimensional heart‐cutting gas chromatography is used to analyze dissolved hydrogen sulfide in crude samples. Liquid samples are separated first on an HP‐PONA column, and the light sulfur gases are heart‐cut to a GasPro column, where hydrogen sulfide is separated from other light sulfur gases and detected with a sulfur chemiluminescence detector. Heart‐cutting is accomplished with the use of a Deans switch. Backflushing the columns after hydrogen sulfide detection eliminates any problems caused by high‐boiling hydrocarbons in the samples. Dissolved hydrogen sulfide is quantified in 14 crude oil samples, and the results are shown in this work. The method is also applicable to the analysis of headspace hydrogen sulfide over crude oil samples. Gas hydrogen sulfide measurements are compared to liquid hydrogen sulfide measurements for the same sample set. The chromatographic system design is discussed, and chromatograms of representative gas and liquid measurements are shown.     

An AAA–DDD Triply Hydrogen‐Bonded Complex Easily Accessible for Supramolecular Polymers

For a complementary hydrogen‐bonded complex, when every hydrogen‐bond acceptor is on one side and every hydrogen‐bond donor is on the other, all secondary interactions are attractive and the complex is highly stable. AAA–DDD (A=acceptor, D=donor) is considered to be the most stable among triply hydrogen‐bonded sequences. The easily synthesized and further derivatized AAA–DDD system is very desirable for hydrogen‐bonded functional materials. In this case, AAA and DDD, starting from 4‐methoxybenzaldehyde, were synthesized with the Hantzsch pyridine synthesis and Friedländer annulation reaction. The association constant determined by fluorescence titration in chloroform at room temperature is 2.09×10⁷ M ^?1. The AAA and DDD components are not coplanar, but form a V shape in the solid state. Supramolecular polymers based on AAA–DDD triply hydrogen bonded have also been developed. This work may make AAA–DDD triply hydrogen‐bonded sequences easily accessible for stimuli‐responsive materials.     

Methyllithium‐Doped Naphthyl‐Containing Conjugated Microporous Polymer with Enhanced Hydrogen Storage Performance

Hydrogen storage is a primary challenge for using hydrogen as a fuel. With ideal hydrogen storage kinetics, the weak binding strength of hydrogen to sorbents is the key barrier to obtain decent hydrogen storage performance. Here, we reported the rational synthesis of a methyllithium‐doped naphthyl‐containing conjugated microporous polymer with exceptional binding strength of hydrogen to the polymer guided by theoretical simulations. Meanwhile, the experimental results showed that isosteric heat can reach up to 8.4 kJ mol^?1 and the methyllithium‐doped naphthyl‐containing conjugated microporous polymer exhibited an enhanced hydrogen storage performance with 150 % enhancement compared with its counterpart naphthyl‐containing conjugated microporous polymer. These results indicate that this strategy provides a direction for design and synthesis of new materials that meet the US Department of Energy (DOE) hydrogen storage target.     

Iodide‐Induced Shuttling of a Halogen‐ and Hydrogen‐Bonding Two‐Station Rotaxane

The first example of utilizing halogen‐bonding anion recognition to facilitate molecular motion in an interlocked structure is described. A halogen‐bonding and hydrogen‐bonding bistable rotaxane is prepared and demonstrated to undergo shuttling of the macrocycle component from the hydrogen‐bonding station to the halogen‐bonding station upon iodide recognition. In contrast, chloride‐anion binding reinforces the macrocycle to reside at the hydrogen‐bonding station.