Molecular structure and conformational composition of gaseous 1,1-dichloro-2-bromomethyl-cyclopropane and 1,1-dichloro-2-cyanomethyl-cyclopropane as determined by electron diffraction

The molecular structure of the title compounds have been investigated by gas-phase electron diffraction. Both molecules exist as about equal amounts of the two gauche conformers. There is no evidence for the presence of a syn conformer, but small amounts of this form cannot be excluded. Some of the important distance (r_a) and angle (∠_α) parameters for 1,1-dichloro-2-bromomethyl-cyclopropane are: r(CH) = 1.095(19) Å, r(C₁C₂) = 1.476(11) Å, r(C₂C₃) = 1.517(31) Å, r(CCH₂Br) = 1.543(32) Å, r(CCl) = 1.752(6) Å, r(CBr) = 1.950(13) Å, ∠CCBr = 110.5(1.9)°, ∠ClCCl = 111.9(6)°, ∠CCC = 117.5(1.3)°, σ₁ (CC torsion angle between CBr and the three-membered ring for gauche-1) = 116.2(5.6)°, σ₂ = −132.7(7.6). For 1,1-dichloro-2-cyanomethyl-cyclopropane the parameter values are: r(CH) = 1.101(16) Å, r(C₁C₂) = 1.498(9) Å, r(C₂C₃) = 1.544(21) Å, r(C₂C₄) = 1.497(33) Å, r(CCN) = 1.466(26) Å, r(CN) = 1.165(8) Å, r(CCl) = 1.754(5) Å, ∠CCCN = 113.7(2.0)°, ∠CCC = 122.8(1.6)°, ClCCl = 112.5(4)°, σ₁ = 113(13)°, σ₂ = −124(10)°.     

The preparation,properties and crystal structure of bis(η5-cyclopentadienyldicarbonyliron)dimethylgermyl]oxide, [(η5-C5H5)(CO)2FeGe(CH3)2]2O

One of the main products of oxidation of (η⁵-C₅-H₅)₂Fe₂(CO)₃Ge(CH₃)₂ by air has been shown to be [(η⁵-C₅H₅)(CO)₂FeGe(CH₃)₂]₂O. The infrared, NMR and mass spectra are consistent with this formula and the detailed structure has been established by X-ray crystallography. In polar solvents the NMR suggests the existence of major and minor conformers interconverting only slowly on the NMR time scale at ≈ 25°. The X-ray diffraction study has shown the compound to consist of two (η⁵-C₅H₅)(CO)₂FeGe(CH₃)₂ moieties joined by a bridging oxygen atom. Two rotational isomers are present in the unit cell in a disordered fashion. Some pertinent average distances and angles are: FeGe, 2.372 Å; GeO, 1.785 Å; GeOGe′, 134°. The compound crystallizes in the monoclinic system, space group P2₁/n, with a 8.056(2), b 12.506(2), c 22.631(3) Å, β 98.01(1)°, d_calc 1.692 g cm^?3. Counter data were collected using Mo-K_α radiation. The 1780 reflections above background were used in least-squares refinement which converged at R₁ = 0.051 and R₂ = 0.068.     

Molecular determinants for drug—receptor interactions: Part 2. An ab initio molecular orbital and dipole moment study of the novel nootropic agent piracetam (2-oxopyrrolidin-1-ylacetamide)

From the ab initio molecular energies of the possible conformers and from a classical dipole moment analysis of 2-oxopyrrolidin-1-ylacetamide (υ = 4.02 D in dioxan at 30.0°C), the preferred conformation in solution of this novel nootropic agent has been determined. The exocyclic NCH₂ bond is rotated in one sense by 90° and the exocyclic CH₂C bond rotated in the same sense by 120° from the “planar” (OO)-cis conformation. The structures of the two enantiomers in solution differ from that of the crystalline molecule.     

The molecular structure of a three-coordinate palladium(II)-styrene complex [Pd(η5-C5H5)(PEt3)(styrene)]BF4

The molecular structure of a three-coordinate palladium(II)-styrene complex, [Pd(η⁵-C₅H₅)(PEt₃)(styrene)]BF₄ has been determined by means of X-ray diffraction. The crystal belongs to the monoclinic system, space group P2₁/c, with four formula units in a cell of dimensions: a 10.229(3), b 11.262(3), c 18.760(5) Å and β 103.77(2)°. The structure was solved by the heavy atom method, and refined by the least-squares procedure to R = 0.050 for 3635 observed reflections. The palladium atom is surrounded by the cyclopentadienyl group, the triethylphosphine ligand and the olefinic bond of styrene in the cationic complex. In the palladiumstyrene bonding, the olefinic bond is inclined by 77.3° to the coordination plane defined by the Pd and P atoms and the center of the cyclopentadienyl ring (PdC(1) 2.176(6), PdC(2) 2.234(5) and C(1)C(2) 1.369(8) Å).     

Transition-metal complexes of two valence tautomers of a bulky phenoxide, 2,6-Bu-t2-4-MeC6H2O− (ArO−); preparation and crystal and molecular structure of a phenoxytitanium(III) and a cyclohexadienonylrhodium(I) complex, [Ti(η-C5H5)2 OAr] and [Rh(ArO-η5)(PPh3)2]

The 2,6-di-t-butyl-4-methylphenoxo ligand (ArO^?) is ambidentate, giving rise to the O-bonded 15-electron d¹ [Ti(η-C₅H₅)₂OAr] and the η⁵ -[C(2)-C(6)]-bonded 18-electron d⁸ complex [Rh(ArO-η⁵)(PPh₃)₂], obtained from [{Ti(η-C₅H₅)₂Cl}₂]-LiO Ar and [Rh{N(SiMe₃)₂}(PPh₃)₂]-ArOH, respectively; the average TiC(η) distance is 2.362(10) Å, TiO 1.892(2) Å, and O:C(of Ar) 1.352(3) Å, and TiOC 142.3(2)°; in the Rh^I complex, C(2)C(6) are coplanar (with CC(av.) 1.38(2) Å). C(1)O 1.28 Å, and Rh to C(2) C(6) bond lengthsare in the range 2.19–2.65 Å.     

Molecular structural of the gauche and trans conformers of ethylamine as studies by gas electron diffraction

The geometrical parameters for the two conformers, gauche (g) and trans (t), of ethylamine have been determined by a joint analysis of the electron diffraction intensity measured in the present study and the rotational constants reported in the literature. The optimized geometries estimated by an SCF MO calculation with a 4-31G(N*) basis set were also used in the analysis to complement the experimental data. The bond lengths (r_g) and the bond angels (r_z) determined are r(CH)_av = 1.107(6) Å r(CN)_t = 1. 470(10)Å, r(CN)_g = 1.475(10) Å r(CC)_t = 1.531(6) Å r (CC)_g = 1.524(6) Å , ∠CCN)_t = 115.0(3)°, and ∠CCCN_g = 109.7(3)°. The uncertainties represent estimated limits of error. The difference between the CCN_g and CCN_g angles predicted by a previous ab initio calculation is confirmed. The enthalpy difference,ΔH(gt), is determined to be 306(200) cal mol⁻¹ using the abundance of the trans conformer, 46(10)%.     

Regiospecific and stereoselective carbometallation of alkynylsilanes by Ziegler-Natta alkylating agents

A 1:1 combination of dichloro(bis-η⁵-cyclopentadienyl)titanium and alkyl-aluminum halide in methylene chloride solution effects the regiospecific alkylation of alkynyl(trimethyl)silanes in 60–95% yields. With RCCSiMe₃ substrates, where Rsaturated alkyl group, the carbometallation (introduction of a methyl or an ethyl group) occurs regiospecifically and stereoselectively in a $\text{trans}$- manner, giving a 75:25 to a 90:10 ratio of isomers. When the R in RCCSiMe₃ is phenyl or 1-cyclohexenyl, then a non-stereoselective carbometallation is observed (50:50 mixtures of isomers). These results, which are explicable in terms of the formation of the (C₅H₅)₂Ti-R cation and its attack on the alkynylsilane, offer stereochemical evidence for a cationic initiating step in the polymerization of ethylene by homogeneous Ziegler-Natta catalysts.     

The syntheses and mass spectra of P[CCCF3]3, As[CCCF3]3, and Sb[CCCF3]3

The syntheses of P[CCCF₃]₃, As[CC CF₃]₃, and Sb[CCCF₃]₃ are reported. The compounds are colorless and volatile, with melting points of ?20° to ?25°, 23–24°, and 55–56°C, respectively. The mass spectra show the molecular ion of each compound. The rearrangement ion [F₃CCCCCCF₂]⁺] gives the strongest peak in each spectrum.     

Estimates for systematic empirical corrections of consistent 4–21G ab initio geometries and their correlations to total energy group increments

The structural parameters of the completely relaxed 4–21G ab initio geometries of more than 30 basic organic compounds are compared to experimental results. Some ranges for systematic empirical corrections, which relate 4–21G bond distances to experimental parameters, are associated with total energy increments. In general, for the currently feasible comparisons, the following corrections can be given which relate calculated distances to experimental r_g parameters and calculated angles to r_s-structures For CC single bond distances, deviations between calculated and observed parameters (r_g) are in the ranges of ?0.006(2) to ?0.010(2) Å for normal or unstrained hydrocarbons; ?0.011(3) to ?0.016(3) Å for cyclobutane type compounds; and +0.001(5) to +0.004(4) Å for CH₃ conjugated with CO. For CO single bonds the ranges are ?0.006(9) to +0.002(3) Å for CO conjugated with CO; and ?0.019(3) to ?0.027(9) Å for aliphatic and ether compounds. A very large and exceptional discrepancy exists for the highly strained ethylene oxide, r_s — r_e = ?0.049(5) Å and in CH₃OCH₃ and C₂H₅OCH₃ the r_s — r_e differences are ?0.029(5), ?0.040(10) and ?0.025(10) Å. Some of these discrepancies may also be due to deficiencies of the microwave substitution method caused by atomic coordinates close to inertial planes. For CN bonds, two types of NCH₃ corrections are from +0.005(6) to ?0.006(6) and from ?0.009(2) to ?0.014(6) Å; and the range for NCO is +0.012(3) to +0.028(4) Å. For isolated CC double bonds the range is + 0.025(2) to +0.028(2) Å. For conjugated CC double bonds the correction is less positive (+0.014(1) Å for benzene). For CO double bonds the corrections are ?0.004(3) to +0.003(3) Å. For bond angles of type HCH, CCH, CCC, CCO, CCO, OCO, NCO and CCC the corrections are of the order of magnitude about 1–2° (or better). Angles centered at heteroatoms are less accurate than that, when hydrogen atoms are involved. Differences in HOC and NHC angles were found in a range of ?2.3(5)° to ?6.2(4)°.     

Antiferromagnetic complexes involving metalmetal bonds : I. Synthesis and molecular structure of an antiferromagnetic dimer with a CrCr bond

The binuclear complex (C₅H₅)₂Cr₂(S)(SCMe₃)₂ was prepared by refluxing a solution of chromocene and t-butylmercaptane in heptane. The structure of the product was determined by single crystal X-ray diffraction. The chronium atoms are linked by a sulphide bridge (SCr 2.24 Å;, <CrSCr 74.1° and two SCMe₃ bridges (CrS 2.38 Å;, <CrSCr 68.3–69.3°). The two cyclopentadienyl ligands (CC 1.41 Å;, CrC 2.23 Å;) are in apical positions, their ring planes being parallel to each other. The complex is an antiferromagnet (?2J cm^?1) despite the small CrSCr angles and short chromiumchromium distance (2.689 Å;) indicative of strong CrCr bonding.     

Synthetic and structural studies on some 1,3-diselena- and 1,3-dithia-[3]ferrocenophanes of germanium and tin. crystal and molecular structure of 1,3-diselena-2,2- dichlorogermyl-[3]ferrocenophane

A series of [3]ferrocenophanes of general formula Fe(C₅H₄X)₂YCl₂ and the spiro compounds [Fe(C₅H₄X)₂]₂Ge (X = S, Se; Y = Ge, Sn) have been prepared by the reaction of ferrocene 1,1′-dithiol and ferrocene 1,1′-diselenol with tetrahalides of germanium and tin. Spectroscopic properties of the compounds are reported. In solution, the compounds are fluxional by a bridge reversal process. The crystal structure of 1,3-diselena-2,2-dichlorogermyl-[3]ferrocenophane at 163 K. has been determined by X-ray diffraction methods. At that temperature, crystals have space group P2₁/n with a 6.222(3), b 16.156(13), c 12.968(4) Å, β 97.53(1)° and Z = 4. Least-squares refinement gave R = 0.033 for 2834 unique significant reflections whose intensities were measured by counter diffractometry. The two SeGe bond lengths are 2.323 and 2.325(1) Å, with GeCl 2.148 and 2.161(1) Å. The SeGeSe bond angle is 118.2(1)°, ClGeCl 104.7(1)°, and SeGeCl angles range from 106.2 to 109.8(1)°. The SeC bond lengths are 1.901 and 1.904(5) Å, with CSeGe angles of 95.8 and 96.5(2)°. The cyclopentadienyl rings are in an eclipsed conformation with a mean twist angle of 2.7°, and are inclined to one another at 6.1°. The Se atoms are displaced from the ring planes by 0.17 and 0.20 Å yielding a non-bonded intramolecular Se…Se contact of 3.99 Å.     

The molecular structure of chlorothiomethoxymethyltriphenylphosphinepalladium(II) at −160 and 20°C

The molecular structure of [PdCl(CH₂SCH₃)(PPh₃)] has been determined from three-dimensional X-ray diffraction data collected at both ?160 and 20°C. The crystal belongs to the monoclinic system, space group P2₁/c, with four formula units in a cell of dimensions: a 11.398(2), b 9.788(1), c 17.267(2) Å and β 95.38(1)° at ?160°C; a 11.454(3), b 9.880(2), c 17.459(2) Å and β 95.84(1)° at 20°C. The structure was solved by the conventional heavy atom method, and refined by the least-squares procedure to R = 0.049 (?160°C) and 0.068 (20°C) for observed reflections. No essential difference is observed between molecular structures at ?160 and 20°C. The geometry around the palladium atom is square-planar. The CH₂SCH₃ group, bonded to the palladium atom through PdC and PdS bonds, forms a metallocyclic three-membered ring [PdC(1) 2.042(6), PdS 2.371(1), SC(1) 1.756(6) and SC(2) 1.807(7) Å, PdC(1)S 76.9(2), PdC(1)H 113(3) and 122(4)°, SC(1)H 115(3) and 112(4) and HC(1)H 113(5)° at ?160°C].     

The crystal structure of Mn(NO)3P(C6H5)3: The first x-ray analysis of a mononuclear metal trinitrosyl complex

The structure of Mn(NO)₃PPh₃ has been analyzed by single-crystal X-ray diffraction. It shows a tetrahedral geometry with essentially linear nitrosyl groups, and an eclipsed configuration around the MnP bond. Average distances and angles are: MnN 1.686(7) Å, MnP 2.315(2) Å, NO 1.165(10) Å, PC 1.815(4) Å, MnNO 177.2(7)°, PMnN 103.6(2)°, NMnN 114.7(4)°. Final R factor 7.3% for 2064 non-zero reflections. The structure of the five-coordinate nitrito complex Mn(NO)₂(ONO)(PEt₃)₂ is also mentioned briefly.     

Selective site deuteration on the sugar ring as an efficient marker of conformation in nucleosides: The CD stretching mode of the (2′-R)-[2′-2H]-2′-deoxyuridine and its 3′,5′-O-(1,1,3,3-tetraisopropyldisiloxan-1,3-diyl)-derivative

A uridine specifically deuterated on the deoxyribose ring at the C2′, and the same compound in a more rigid form, due to a chemically fused ring (between C3′ and C5′), have been synthesized. By NMR, the coupling constants J_1′-2′ and J_3′-4′ have been determined and the populations of the C2′-endo and C3′-endo conformers have been deduced for the two compounds. Comparison of these results with an FTIR and Raman study of the stretching mode νCD on the C2′ site allows a specific assignment of each observed band to one of the two classes of conformers. This enables us to consider the further step: the direct recognition, by IR and Raman spectroscopies, of the local conformation at a specific site of a synthetic oligonucleotide, using the νCD signals as marker bands.     

Kristall- und molekülstruktur von hexaphenyldistannylselenid (C6H5)3SnSeSn(C6H5)3

The crystal and molecular structure of hexaphenylditin selenide (C₆H₅)₃SnSeSn(G₆H₅)₃ was determined by X-ray diffraction data and was refined to R  0.055. The compound is monoclinic, space group P2₁, with a  9.950(4), b  18.650(7), c  18.066(6) Å, β  106.81(4)°, Z  4. The two molecules in the asymmetric unit differ slightly in their conformations, both having approximate C₂ symmetry. Bond lengths and angles are: SnSe 2.526 (2.521(3) ? 2.538(3)) Å; SnC 2.138 (2.107(16)?2.168(19)) Å; SnSeSn 103.4(1)°, 105.2(1)°. There are only slight angular distortions at the SnSeC₃ tetrahedra (SeSnC angles: 104.3(5)?114.8(4)°). The bond data indicate essentially single bonds around the Sn atoms.     

The crystal structure of triphenyltin isothiocyanate

The crystal structure of Ph₃SnNCS has been determined by single crystal X-ray diffraction. The crystals are monoclinic, P2₁, a = 19.02(3), b = 11.67(2), c = 15.49(2)Å;, β = 95.64(10)°, Z = 8. The molecules are arranged in infinite zig-zag S…SnNCS…Sn&.sbnd; chains similar to those in Me₃SnNCS, but with slightly longer SnN, shorter SnS bonds, and almost planar SnC₃ units. Principal mean bond lengths and angles are: SnN, 2.22(5); NC, 1.17(8); CS, 1.58(7); SSn, 2.92(1); SnC, 2.09(3); CC, 1.38(2)Å; SnNCm 161(4); CSSn, 97(3); SSnN, 175(3) and CSnC, 119.8(1.5)°.     

Crystal and molecular structure of tricyclopentadienyltetrahydrofuranuranium(III), (η5-C5H5)3U·OC4H8

Tricyclopentadienyltetrahydrofuranuranium(III), (η⁵-C₅H₅)₃U·OC₄H₈, crystallizes in the centrosymmetric monoclinic space group P2₁/n with a 8.248(3), b 24.322(17), c 8.357(4) Å, β 101.29(5)°, V 1644.0 ų and ρ(calc) 2.04 g cm^?1 for Z = 4 and mol.wt. 595.0. Diffraction data (Mo-K_α, 2θ(max) 45°) were collected on an Enraf-Nonius CAD4 diffractometer and the structure was refined to R_w(F) 4.7% for those 1530 reflections having I > 2σ(I). The molecule consists of a distorted tetrahedral arrangement of THF and (η⁵-C₅H₅) ligands with CpUCp angles in the range 110.4–122.4° and CpUO angles between 90.2 and 106.0°. Individual uranium-carbon distances range from 2.76(2) to 2.82(2) Å and average 2.79[1] Å. The uranium-oxygen distance of 2.551(10) Å suggests a 10-coordinate U³⁺ radius of 1.20 Å in this class of compounds.     

Structural information from OH stretching vibrations—XVII. On the different conformers in benzylalcohols and anthracylmethanols

The presence of conformers and corresponding OH rotamers in benzylalcohol and nine related compounds, dissolved in CCl₄ and CS₂, was studied by means of the i.r. OH stretching band. It is demonstrated that in the benzyalcohols at least two conformers are present differing in the position of the CO bond with regard to the plane of the ring, viz. at torsion angles ω of 0° and approximately 60°. The existence of a third conformation with ω = 90° cannot be excluded. The presence of different OH rotamers appears to be affected by the strength of the OH … π interaction. Effects on the distribution of conformers could not be proved.     

Crystal and molecular structure of 5-ethyl-5,10-dihydrido-10,10-diphenylphenazasiline

The structure of 5-ethyl-5,10-dihydro-10,10-diphenylphenazasiline has been determined from three-dimensional X-ray data collected by counter methods. The compound in the monoclinic space group P2₁/b with a 10.782(5), b 22.642(9), c 8.830(4) Å and γ 74°41′(2). The observed and calculated densities (Z = 4) are 1.22 and 1.21 g cm^-3, respectively. Anisotropic(Si, N, C)-isotropic block-diagonal least squares refinement gave a conventional R factor of 3.9% for 1871 reflections with I>2σ(I). The central six-membered ring of the tricyclic system adopts a boat conformation; the dihedral angle between the benzo-group planes is 157.3°. The CSiC angle in the heterocycle is 101.1(1)°; the mean SiC bond length is 1.850(2) Å (in the cycle) and 1.862(2) Å (with Ph group). The nitrogen atom is displaced 0.05 Å from the plane of the adjacent carbon atoms; the sum of the angle about N is 359.7°.     

Reactive Free Radicals : by J.M. Hay, Academic press, London, 1974, 158 pages, £4.40.

The linkage isomers CpM(CO)_nSCN and CpM(CO)_nNCS (Cp = η-C₅H₅; M = Fe, n = 2; M = Mo, n = 3) are interconverted by 366 nm irradiation in tetrahydrofuran solution at 30°C. Molybdenum and tungsten halide complexes CpM(CO)₂-(PPh₃)X undergo cistrans isomerization and disproportionation to CpM(CO)(PPh₃)₂X and CpM(CO)(PPh₃)₂X under similar conditions (benzene solution).