Conformational studies of cyclic pentapeptides by proton magnetic resonance spectroscopy

The proton magnetic resonance spectra of c-(-Gly-L -Ala-Gly-Gly-L -Pro-) (I) and four analogous cyclopentapeptides are presented. At ambient temperature the spectra contain two sets of resonances which correspond to two different molecular conformations of the peptides. The relative concentrations of the two forms depend on the peptide, the solvent, and the temperature. For the two molecular species of peptide I in DMSO solution, the NMR. data imply that the peptide linkage involving the nitrogen of proline is respectively in the cis- and the trans-form, and both conformations contain intramolecular hydrogen bridges. Replacement of L -alanine in I by L -cysteine leaves the molecular conformations essentially unalteed. On the other hand substitution of L -proline by L -proline, or replacement of the two glycines in positions 3 and 4 by two sarcosyl residues gives rise to markedly different types of peptide backbone conformation.     

Conformational analysis of rigid enol-ethers by proton nuclear magnetic resonance

Z,E isomers of rigid enol-ethers were studied by proton nuclear magnetic resonance. As with oximes, it was found that the chemical shift difference (Δδ=δ_z?δ_E) for the protons α to the function in question depends on the dihedral angle between the C_α? H and C?C bonds. This phenomenon can be explained by an electric field effect and not by a magnetic anisotropy effect. The present study has allowed the derivation of values of the volume magnetic susceptibility and the product of b×the dipole moment for the C? O bond.     

Conformational studies of cyclo(L-Phe-L-Pro-Gly-L-Pro)2 by 13C nuclear magnetic resonance

The 13C-NMR spectrum (Fig. 2,1) of cyclooctapeptide cyclo(L-phe-L-Pro-Gly-L-Pro)2 (A) in CDC13 suggested that its conformation involved the coexistence of two kinds of C2-symmetric conformation with trans-trans-trans-trans and cis-trans-trans-trans forms. Adding 0.5 equivalent of CsSCN or one equivalent of DL-Phe-OMe.HCl to the solution of cyclopeptide (A) in CDC13 yielded 13C-NMR spectra (Fig. 2,2 and Table I) which suggested a single C2-symmetric conformation with trans-trans-trans-trans form, resulting from the formation of complexes with CsSCN or DL-Phe-OMe.HCl. The 13C-NMR spectrum of complexes of A with DL-Phe-OMe.HCl displayed separate resonances for C(gamma), C(o), C(m), C(alpha), and C(beta) of D-Phe-OMe.HCl and L-Phe-OMe.HCl (Table I).     

Molecular structure of di-aryl-aldimines by multinuclear magnetic resonance and X-ray diffraction

The complete ¹H, ¹³C and ¹⁵N NMR analyses for a series of 25 diaryl-aldimines containing phenyl, pyridyl, pyrazolone and furanyl moieties are described herein. Detailed evaluation of substituent chemical shift and coupling constant effects showed that interaction between the lone pair of the pyrazolone carbonyl group or the nitrogen of 2-substitued pyridines with the aldimine hydrogen increases the value and shifts the resonance signal for this hydrogen to high frequency, in the ¹H NMR spectra. The X-ray crystal structure analysis of pyrazolone substituted aldimines evidenced the planarity of the aryl groups which are conjugated with the CN double bond. In the case of the N-(2-pyridinemethylene)-1,5-dimethyl-2-phenyl-1,2-dihydro-pyrazol-3-one, two rotamers were observed in the same unit cell.     

Carbon-13 and proton magnetic resonance studies of some carbonyl-bis-(amino acid esters)

A number of carbonyl-bis-(amino acid esters) have been examined by proton and carbon-13 nuclear magnetic resonance techniques. All but one of the compounds were synthesized with two chiral centers of like-configuration. In one series, the diastereotopic nonequivalence of isopropyl methyl groups attached to the asymmetric centers is apparent in both the proton and the carbon spectra, and the relative magnitude of the observed nonequivalence increases slightly with increasing ‘bulk’ of the neighboring ester groups. Carbon-13 chemical shifts are reported, and a linear correlation of Taft σ* inductive constants with ester carbonyl carbon chemical shifts and with amide proton chemical shifts (for a series in which only variation of the ester substituent occurs) is presented. In addition, the effect in terms of chemical shift differences of keeping the same ester group at the asymmetric centers while varying the other substituent group, is examined.     

Spectroscopic,magnetic and X-ray powder diffraction studies on U(III) and Np(III) formates

The synthesis of the new Np(III) compound Np(HCOO)₃ is reported and its lattice data, spectroscopic and magnetochemical properties are compared with the refined properties of U(HCOO)₃. Both compounds are isotypic and crystallize in the rhombohedral lattice of Gd(III) formate. The electronic reflectance and IR spectra have been measured and discussed. Low temperature magnetic susceptibilities indicate an antiferromagnetic transition for U(HCOO)₃ at T_N = 12 K. The magnetic moments of 3.70 B.M. (140–300 K) for U(HCOO)₃ and 2.69 B.M. (80–300 K) for Np(HCOO)₃ closely approach the corresponding free ion values.     

Conformational studies by nuclear magnetic resonance in nematic phases: Benzyl chloride

Spectra of benzyl chloride were analysed in two nematic phases (PCH and ZLI). The existence of the molecule as conformer with the C? Cl bond perpendicular or parallel to the benzene plane can be safely excluded. The data are consistent with a conformer with the C? Cl bond forming an angle of 60° with the benzene plane. A full discussion of the conformational problem was not possible owing to the small number of independent D_ij couplings related to the internal motion. In addition, when dealing with low potential barriers, the LCNMR technique does not give rigorous answers.     

Conformational analysis of poly(ethylene oxide) and model compounds by nuclear magnetic resonance spectroscopy

In order to determine the conformation of poly(ethylene oxide) (PEO), ¹³C satellite spectra of PEO, 1,2-dimethoxyethane (DME), and dioxane were measured at various temperatures in various solvents, and analyzed. Relations between the coupling constants were derived from the linearity between the parameters N = J_AB + J_A′B and L = J_A′B in AA′BB′ spectra of PEO and DME. The vicinal coupling constants for the individual rotational isomers were obtained from the above relations and the temperature dependences of N and L and the enthalpy differences were calculated in each solvent. The gauche rotamer is more stable than the trans isomer by 250–500 cal/mole in all cases examined.     

Conformational studies of 1,2,3-trichloro- and 1,2,3-tribromopropane by nuclear magnetic resonance spectroscopy: attractive parallel (1:3) halogen-hydr

Analysis of the NMR spectra of 1,2,3-trichloropropane and 1,2,3-tribromopropane in various media shows the most stable conformer to be AG_-. The populations of several conformera have been estimated by using pure trans and gauche coupling constants obtained from closely similar molecules. The calculated populations found in non-polar solvents agree well with those obtained by electron diffraction studies in the gas phase. It is suggested that the AG_- form is stabilised relative to AG₊ by the former having two parallel (1:3) halogen-hydrogen attractions against one in the AG₊ form. Comparison is made to related molecules where the most stable conformers also have the greatest number of parallel (1:3) halogen-hydrogen interactions.     

Conformational analysis of N-arachidonylethanolamide (anandamide) using nuclear magnetic resonance and theoretical calculations

The conformational properties of cis-5,8,11,14-eicosatetraenoylethanolamide (anandamide) were analysed by the combined use of NMR experimental results plus molecular simulations. The structure of anandamide was found to be a predominantly linear with a seven-atom ring of the ethanolamine group having a hydrogen bond which stabilizes the molecule. The vinylic group present has a cis conformation in solution. The terminal chain has a linear conformation and undergoes isotropic fast motion typical of this structure. Copyright © 2001 John Wiley & Sons, Ltd.     

The molecular structure of tetrathiofulvalene-13C (TTF) from proton magnetic resonance studies using nematic solvents

The molecular structure of TTF dissolved in nematic liquid crystalline solvents has been determined from the proton magnetic resonance including couplings due to ¹³C in natural abundance. The molecule is puckered in a boat conformation with the SCHCHS planes making a dihedral angle of 13 ± 2° with the S₂C  CS₂ plane. The other structural parameters obtained are r_CH = 1.085 ± 0.014 Å and the angel CCH = 123.7 ± 1.5°.     

Combinatorial multinuclear NMR and X-ray diffraction studies of uranium(VI)-nucleotide complexes

The complex formation of uranium(VI) with four nucleotides, adenosine- (AMP), guanosine- (GMP), uridine- (UMP), and cytidine-monophosphate (CMP), has been studied in the alkaline pH range (8.5-12) by (1)H, (31)P, (13)C, and (17)O NMR spectroscopy, providing spectral integral, chemical shift, homo- and heteronuclear coupling, and diffusion coefficient data. We find that two and only two complexes are formed with all ligands in the investigated pH region independently of the total uranium(VI) and ligand concentrations. Although the coordination of the 5'-phosphate group and the 2'- and 3'-hydroxyl groups of the sugar unit to the uranyl ions is similar to that proposed earlier ("Feldman complex"), the number and the structures of the complexes are different. The uranium-to-nucleotide ratio is 6:4 in one of the complexes and 3:3 in the other one, as unambiguously determined by a combinatorial approach using a systematic variation of the ratio of two ligands in ternary uranium(VI)-nucleotide systems. The structure of the 3:3 complex has been determined by single-crystal diffraction as well, and the results confirm the structure proposed by NMR in aqueous solution. The results have important implications on the synthesis of oligonucleotides.