Ruthenium complexes as protein kinase inhibitors

[reaction: see text] Replacing complex natural products with simple metal complexes could lead to a new class of metallopharmaceuticals in which the metal center plays mainly a structural role. A strategy is introduced for the creation of ruthenium complex-based protein kinase inhibitors 1 (X = CO or CH(2)), morphed out of the class of indolocarbazole inhibitors with the alkaloid staurosporine as its most prominent member.     

Bisphosphonate metal complexes as selective inhibitors of Trypanosoma cruzi farnesyl diphosphate synthase

In the search for a pharmacological answer to treat Chagas disease, eight metal complexes with two bioactive bisphosphonates, alendronate (Ale) and pamidronate (Pam), were described. Complexes of the formula [M(2)(II)(Ale)(4)(H(2)O)(2)]·2H(2)O, with M = Cu, Co, Mn, Ni, and ([CuPam]·H(2)O)(n) as well as [M(II)(Pam)(2)(H(2)O)(2)]·3H(2)O, with M = Co, Mn and Ni, were synthesized and fully characterized. Crystal structure of [Cu(2)(II)(Ale)(4)(H(2)O)(2)]·2H(2)O, [Co(II)(Pam)(2)(H(2)O)(2)] and [Ni(II)(Pam)(2)(H(2)O)(2)] were solved by X-ray single crystal diffraction methods and the structures of [M(2)(II)(Ale)(4)(H(2)O)(2)]·2H(2)O complexes M = Co, Mn and Ni were studied by X-ray powder diffraction methods. All obtained complexes were active against the amastigote form of Trypanosoma cruzi (T. cruzi), etiological agent of Chagas disease. Most of them were more active than the corresponding free ligands showing no toxicity for mammalian cells. The main mechanism of the antiparasitic action of bisphosphonates, inhibition of parasitic farnesyl diphosphate synthase (TcFPPS), remains in the obtained metal complexes and an increase in the inhibiting enzyme levels was observed upon coordination. Observed enzymatic inhibition was selective for TcFPPS as the metal complexes showed no or little inhibition of human FPPS. Additionally, metal complexation might improve the bioavailability of the complexes through the hindrance of the phosphonate group's ionization at physiological pH and, eventually, through the ability of plasma proteins to work as complex transporters.     

Ruthenium half-sandwich complexes as protein kinase inhibitors: derivatization of the pyridocarbazole pharmacophore ligand

A general route to ruthenium pyridocarbazole half-sandwich complexes is presented and applied to the synthesis of sixteen new compounds, many of which have modulated protein kinase inhibition properties. For example, the incorporation of a fluorine into the pyridine moiety increases the binding affinity for glycogen synthase kinase 3 by almost one order of magnitude. These data are supplemented with cyclic voltammetry experiments and a protein co-crystallographic study.     

Features of selective kinase inhibitors

Small-molecule inhibitors of protein and lipid kinases have emerged as indispensable tools for studying signal transduction. Despite the widespread use of these reagents, there is little consensus about the biochemical criteria that define their potency and selectivity in cells. We discuss some of the features that determine the cellular activity of kinase inhibitors and propose a framework for interpreting inhibitor selectivity.     

Substitution in labile octahedral metal complexes – a retrospective view

Transition Metal Chemistry -     

Application of the ΔΛ isomerism of octahedral metal complexes as a chiral source in photochemistry

Photochemical studies on the use of chiral metal complexes in homogenous and heterogeneous systems are surveyed and commented on their significance. A main focus is laid on the utility of the ΔΛ isomerism of octahedral metal complexes as a chiral source. The reported works demonstrate that chiral metal complexes are effective as a molecular element in achieving varieties of functions such as chiral discrimination, chiral transfer, sensing and photoresponsive guests for biomolecules or liquid crystals.     

Targeting large kinase active site with rigid, bulky octahedral ruthenium complexes

A strategy for targeting protein kinases with large ATP-binding sites by using bulky and rigid octahedral ruthenium complexes as structural scaffolds is presented. A highly potent and selective GSK3 and Pim1 half-sandwich complex NP309 was successfully converted into a PAK1 inhibitor by making use of the large octahedral compounds Lambda-FL172 and Lambda-FL411 in which the cyclopentadienyl moiety of NP309 is replaced by a chloride and sterically demanding diimine ligands. A 1.65 A cocrystal structure of PAK1 with Lambda-FL172 reveals how the large coordination sphere of the ruthenium complex matches the size of the active site and serves as a yardstick to discriminate between otherwise closely related binding sites.     

Characterization of a conserved structural determinant controlling protein kinase sensitivity to selective inhibitors

Some protein kinases are known to acquire resistance to selective small molecule inhibitors upon mutation of a conserved threonine at the ATP binding site to a larger residue. Here, we performed a comprehensive mutational analysis of this structural element and determined the cellular sensitivities of several disease-relevant tyrosine kinases against various inhibitors. Mutant kinases possessing a larger side chain at the critical site showed resistance to most compounds tested, such as ZD1839, PP1, AG1296, STI571, and a pyrido[2,3-d]pyrimidine inhibitor. In contrast, indolinones affected both wild-type and mutant kinases with similar potencies. Resistant mutants were established for pharmacological analysis of betaPDGF receptor-mediated signaling and allowed the generation of a drug-inducible system of cellular Src kinase activity. Our data establish a conserved structural determinant of protein kinase sensitivity relevant for both signal transduction research and drug development.     

Ruthenium half-sandwich complexes as protein kinase inhibitors: an N-succinimidyl ester for rapid derivatizations of the cyclopentadienyl moiety

Cyclopentadienyl half-sandwich ruthenium complexes have been demonstrated to be promising scaffolds as protein kinase inhibitors. In order to rapidly identify derivatives which display modified pharmacological properties, we developed the synthesis of an organoruthenium compound bearing an N-succinimidyl ester at the cyclopentadienyl moiety. The quenching of this activated ester with a library of primary amines, followed by testing of the resulting amide library, led to the identification of organometallic Pim-1 and GSK-3 inhibitors with improved potencies and kinase selectivities. [structure: see text].     

Coinage metal complexes with N-heterocyclic carbene ligands as selective catalysts in diboration reaction

We describe the improved catalytic reactivity of terminal alkenes with 1,2-diboranes in the presence of Au(I) and Ag(I) complexes when N-heterocyclic carbene ligands are used. The new catalytic systems are able to diminish the undesired β-H-elimination of the alkylboryl–metal intermediates, which leads to the formation of hydroborated byproducts. The electronic properties and molecular the structure of the precursors of the catalysts could explain the modest asymmetric induction provided.     

Discriminating octahedral transition metal ions: highly selective tripodal tris-(2,2'-bipyridine) functionalized piperazine cyclophane receptor for Cu2+ ions

New tripodal transition metal ion receptors, tris(5-ethoxycarbonyl-2,2'-bipyridine) and tris(5-carboxylate-2,2'-bipyridine) substituted 27-membered trimeric piperazine cyclophanes 5 and 7 as well as tetra(5-ethoxycarbonyl-2,2'-bipyridine) substituted 36-membered tetrameric piperazine cyclophane 6, have been prepared and their transition metal ion complexing properties studied in solution by UV-vis spectroscopy and in the solid state by single-crystal X-ray diffraction. The crystal structures of [H(3)5(3+)·Fe(2+)]·4(ClO(4)(-))·CF(3)COO(-) (V), [H(3)7(2+)·Fe(2+)]·2(SO(4)(2-)) (VII) and the reference complex [tris(5,5'-bis(ethoxycarbonyl)-2,2'-bipyridine)Fe(II) perchlorate] (I) showed that the robust piperazine cyclophane is an optimal platform in preorganizing the 2,2'-bipy moieties to form a very fixed octahedral coordination site. In an acidic water solution, the highly preorganized structure of 5 gives a [5·Fe(2+)] complex, the stability of which is comparable with the classical tris(2,2'-bipy) Fe(2+)-complex but it is a significant 3.7 logK units more stable than the non-preorganized tetrameric analog [6·Fe(2+)]. Detailed studies with other similar divalent octahedral transition metal cations showed that the restricted octahedral coordination in complexes of 5 results in an unusual selectivity. The selectivity order [Zn(2+)相似文献   

Discovery and structural insight of a highly selective protein kinase inhibitor hit through click chemistry

Novel bisaryl maleimide derivatives to mimic natural kinase inhibitors were prepared through click chemistry. A highly selective hit was discovered in a 124-kinase-assay, and docking studies revealed a π-π stacking interaction with the Phe67 at the P-loop of GSK-3β kinase.     

Synthesis and characterization of some octahedral transition metal complexes with phenyl-2-picolylketone thiosemicarbazone

Summary A series of transition metal complexes with phenyl-2-picolylketone-thiosemicarbazone, LH, of the general formula [ML₂]Cl_nmH₂O, (M=Cr³⁺, Mn²⁺, Fe²⁺, Rh³⁺, Ir³⁺ or Ru³⁺; n=0 or 1 and m=1,2 or 3) have been prepared and characterized. Magnetic and spectral (electronic and vibrational) data are commensurate with an octahedral ligand field for all complexes. The variable temperature magnetic moment shows that the iron(II) complex exists in a temperature-dependent high-spinlow-spin equilibrium. The far i.r. spectra show that the strength of the M–S bond follows the order: Mn²⁺ 2+3+3+3+3+. The various ligand field parameters, Dq, B' and are calculated.     

Natural products as kinase inhibitors

Natural products have been widely used to dissect the basic mechanisms of fundamental life science and as clinical therapeutics. Recently, there has been significant interest in discovering new chemical pharmacophores in natural products to fulfil the vast demand for novel kinase inhibitors and address critical unmet medical needs with respect to signal transduction pathways. In this review, we summarize the history of several different classes of natural product-derived kinase inhibitors, discuss their kinome-wide target profiles and examine their structural binding modes based on available 3D X-ray structures. In particular, their origin, target activity, selectivity, scope and potential therapeutic development are highlighted against the backdrop of medicinal chemistry.     

Phosphorylated flavonoids as selective carboxylesterase inhibitors

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Infrared spectroscopic study on the co-ordination bond-II: Infrared spectra of octahedral metal cyanide complexes

Infrared spectra of [Fe^II(CN)₆]⁴⁻, [Fe^III(CN)₆]³⁻, [Co(CN)₆]³⁻, [Ru(CN)₆]⁴⁻, [Os(CN)₆]⁴⁻, [Co(NH₃)₆][Co(CN)₆] and [Co(NH₃)₆] [Fe^III(CN)₆] have been measured in the 4000–250 cm⁻¹ region. In addition to the characteristic C  N stretching vibrations, metal-ligand stretching and metal—CN bending vibrations have been observed in the CsBr region. Normal co-ordinate treatment has been made and the observed frequencies have been quantitatively assigned on the basis of the potential energy distribution and L-matrix. A very interesting relation between the metal-ligand stretching and CN stretching force constants has been found.     

Identification of polyoxometalates as nanomolar noncompetitive inhibitors of protein kinase CK2

Protein kinase CK2 is a multifunctional kinase of medical importance that is dysregulated in many cancers. In this study, polyoxometalates were identified as original CK2 inhibitors. [P2Mo18O62](6-) has the most potent activity. It inhibits the kinase in the nanomolar range by targeting key structural elements located outside the ATP- and peptide substrate-binding sites. Several polyoxometalate derivatives exhibit strong inhibitory efficiency, with IC50 values < or = 10 nM. Furthermore, these inorganic compounds show a striking specificity for CK2 when tested in a panel of 29 kinases. Therefore, polyoxometalates are effective CK2 inhibitors in terms of both efficiency and selectivity and represent nonclassical kinase inhibitors that interact with CK2 in a unique way. This binding mode may provide an exploitable mechanism for developing potent drugs with desirable properties, such as enhanced selectivity relative to ATP-mimetic inhibitors.     

New highly selective picrate sensors based on charge-transfer complexes.

Two novel highly selective potentiometric membrane sensors responsive to picrate ion were developed. They are based on the use of N,N'-dibenzoyl-1,4,10,13-tetraoxa-7,16-diazacyclooctadecane (DD18C6)-picrate and Kryptofix 222-picrate charge-transfer complexes as novel electroactive materials in poly(vinyl chloride) matrix membranes plasticized with o-nitrophenyloctylether or dioctylphthalate. The sensors show a Nernstian response with anionic slopes of -59.0 +/- 0.1 and -58.0 +/- 0.2 mV decade(-1) over concentration ranges of 6.0 x 10(-5) - 1.0 x 10(-2) and 7.0 x 10(-5) - 1.0 x 10(-2) mol l(-1) picrate ion and pH ranges of 5-11.5 and 5.5-11.5 for DD18C6 and Kryptofix 222 based picrate sensors, respectively. Both sensors show highly selectivity towards picrate ion over many hydrophilic and lipophilic anions, and exhibit a non-Hofmeister selectivity sequence, which is an improvement over methods reported so far. The sensors are used for the titrimetric determination of alkaloids using picrate as a titrant.     

Anthracene cycloadducts as highly selective chiral auxiliaries

A new chiral auxiliary was designed and easily prepared from a Diels-Alder cycloadduct of an enantiomerically pure anthracene with maleimide. Excellent diastereoselectivities in Diels-Alder reactions, conjugate additions, and aldol reactions employing these auxiliaries are now reported.