Syntheses,crystal structures,and magnetism of two phenylacetate imidazolate copper(II) complexes

The influence of pH for the reaction system involving CuCl₂?·?2H₂O, imidazole (Him) and phenylacetic acid (HL) at room temperature was investigated. Cu₂(Him)₄L₄?·?2H₂O (1) and Cu₃(Him)₂(im)₂L₄ (2) were synthesized at pH 6.5 and 7.5, respectively. In 1, the Cu is coordinated by two nitrogen atoms of two Him and three oxygen atoms from three phenylacetates to form a square pyramid CuN₂O₃. Adjacent square pyramids share edges to form Cu₂N₄O₄ dimers, which are assembled by hydrogen bonds into a 2-D layer parallel to the (001) plane. In 2, copper atoms are interlinked by im^? and L^? to form a 2-D layer parallel to (100). The resulting layers have C–H···O hydrogen bonds leading to a 3-D supramolecular architecture. Variable temperature magnetism of 1 and 2 suggests a weak ferromagnetic or antiferromagnetic coupling exchange (J?=?0.58?cm^?1 for 1, J?=??10.24?cm^?1 for 2).     

Nucleophilic 1,2-Shifts of Alkoxycarbonyl and Carboxylate Groups in the Benzilic-Acid Type Rearrangement of α,β-Dioxobutyric Esters

tert-Butyl α,β-dioxobutyrate (hydrate; 1d ) undergoes, at medium or high pH, the benzilic-acid rearrangement with exclusive 1,2-shift of the COO(t-Bu) group; the same is true for the corresponding isopropyl ester 1c and ethyl ester 1b at high pH, whereas at lower pH, the overall picture of these reactions is complicated by concurrent hydrolysis of the ester, followed by a 1,2-shift of the COO ^? group. Consequently, the shift of these electron-attracting groups cannot be considered to be systematically disfavoured (compared, e.g., with alkyl-group shifts). Kinetic measurements of the rearrangement show for both esters (as well as for the analogous ethyl ester 1b , and also for ethyl 3-cyclopropyl-α,β-dioxopropionate ( 4 )) a characteristic rate profile: at relatively low pH, k is proportional to [HO^?], approaching saturation with increasing [HO^?] (interpreted as complete transformation of the substrate into the hydrate monoanion), which is followed at higher pH by another rate increase with k proportional to [HO^?] (probably due to the reaction of the hydrate dianion). The similarity of k values for 1b-d shows that in the shift of COOR steric hindrance caused by R is negligible.     

Preparation and structural,spectroscopic, thermal,and electrochemical characterizations of iron(III) compounds containing dipicolinate and 2-aminopyrimidine or acridine

Two new iron(III) compounds, (Hamp)[Fe(pydc)₂]?·?2H₂O (1) and (Hacr)[Fe(pydc)₂]?·?2H₂O (2) (pydc^2??=?pyridine-2,6-dicarboxylic acid, amp?=?2-aminopyrimidine, acr?=?acridine), have been hydrothermally synthesized. Both compounds were characterized by spectroscopic methods (IR, UV/Vis), and their molecular and crystal structures were determined by X-ray crystal structure analysis and their thermal stability by thermogravimetric analysis/differential thermal analysis (TGA/DTA) methods. Compound 1 consists of Hamp⁺ cation and [Fe(pydc)₂]^? anion and 2 consists of Hacr⁺ cation and [Fe(pydc)₂]^? anion. Crystallographic characterization revealed an octahedron as a coordination polyhedron for the complex anion in 1 and 2 and the same O,N,O′-chelated coordination mode of pyridine-2,6-dicarboxylate. The crystal structures of 1 and 2 are stabilized by a complicated network of hydrogen bonds between the crystallization water molecules, counter ion, and carboxylates of pydc^2?. Thermogravimetric (TG) analyses of the two compounds were carried out to examine their thermal stabilities. Cyclic voltammetric response of bare glassy carbon electrode surface in 0.10?mol?L^?1 phosphate buffer containing 1 and 2 at different pH values indicated that they have the same voltammograms at all pH values and the electrochemical behavior of 1 and 2 has not been affected by different ion pairs. The formal potential of the solutions of 1 and 2 at the glassy carbon electrode surface was also pH-dependent with a slope of ?57.0?mV/pH unit at 25°C. This shows that the number of electrons and protons involved in the electrode process is equal.     

甾体磷酰胺类缀合物在电喷雾质谱中的裂解特征

Novel steroidal phosphoramidate conjugates of 3'-azido-2',3'-dideoxythymidine(AZT)and amino acid esterswere synthesized and determined by positive and negative ion electrospray ionization mass spectrometry.The MSfragmentation behaviors of the steroidal phosphoramidate conjugates have been investigated in conjunction withtandem mass spectrometry of ESI-MS/MS.There were three characteristic fragment ions in the positive ion ESImass spectra,which were the Na adduct ions with loss of steroidal moiety,amino acid ester moiety from pseudomolecular ion(M Na)~ ,and the phosphoamino acid methyl ester Na adduct ion by α-cleavage of the phosphora-midate respectively.The main fragment ions in negative ion ESI mass spectra were the ion(M-HN_3)~-,the ion(M-AZT-H)~-,and the ion(M-steroidal moiety-H)~- besides the pseudo molecular ion(M-H)~-.Thefragmentation patterns did not depend on the attached amino acid ester moiety.     

Solvothermal synthesis,structure, and luminescence of a 3-D Cd(II) complex assembled with biphenyl-2,5,2′,5′-tetracarboxylic acid involving in situ ligand reaction

A 3-D metal-organic framework [Cd₃(L)₂(DMF)₂]?·?2H₂O?·?2DMF (1) (H₃L?=?2-(dimethylcarbamoyl)biphenyl-5,2′,5′-tricarboxylic acid, DMF?=?N,N-dimethylformamide) with trinuclear Cd(II) units has been prepared. Complex 1 is a (3,?6)-connected (4²?·?6)₂(4⁴?·?6²?·?8⁸?·?10) coordination net, which results from the solvothermal in situ formation of a new asymmetric ligand, 2-(dimethylcarbamoyl)biphenyl-5,2′,5′-tricarboxylic acid (H₃L), through amidation of biphenyl-2,5,2′,5′-tetracarboxylic acid (H₄bptc). Additionally, the luminescence of 1 has been investigated.     

Hydrogen-bonded assemblies of trinuclear metal string complexes

Three kinds of trinuclear metal string complexes, [Ni₃(dpa)₄(L¹)₂]?·?H₂O?·?C₂H₅OH (L¹?=?(E)-3-(2-hydroxyl-phenyl)-acrylic acid) (1), [Ni₃(dpa)₄(L²)₂]?·?2C₂H₅OC₂H₅ (L²?=?(E)-3-(3-hydroxyl-phenyl)-acrylic acid) (2) and [Ni₃(dpa)₄(L³)₂]?·?3CH₂Cl₂?·?1.5CH₃OH (L³?=?(E)-3-(4-hydroxyl-phenyl)-acrylic acid) (3). (dpa^??=?bis(2-pyridyl)amido), have been synthesized. The structures of 1 and 2 have been analyzed by the X-ray single-crystal diffraction showing hydrogen-bonded networks.     

The synthesis of an α-azaornithine derivative and its reaction with trypsin

N^α-Benzoyl-α-azaornithine phenyl ester has been synthesised as the trifluoroacetate. In aqueous solution the ester salt is stable at pH 3 but decomposes at higher pH values. The analogue ester inhibits trypsin rapidly, and chymotrypsin much more slowly, by acylation at the active site. Spontaneous deacylation of the α-azaacyl-trypsin occurs with a first-order rate constant of 2·1 × 10^?4 s^?1 at 23·8° and pH 7·6.     

Esterolytic activity of imidazole-containing polymers. Hydrophobic influences in copoly[1-alkyl-4- or 5-vinylimidazole/4(5)-vinylimidazole]-catalyzed hydrolysis of 3-nitro-4-acyloxybenzoic acids

Water-soluble copolymers containing imidazole and N-alkylated imidazole pendant groups have been synthesized in order to investigate the hydrophobic interactions between polymeric catalysts and long alkyl chain ester substrates. Copoly[1-methyl-4-vinyl-imidazole/4(5)-vinylimidazole],copoly[1-methyl-5-vinylimidazole/4(5)-vinylimidazole], copoly[1-ethyl-5-vinylimidazole/4-(5)-vinyl-imidazole] and copoly[1-propyl-5-vinylimidazole/4(5)-vinylimidazole] were synthesized and their catalytic activity toward 3-nitro-4-acyloxybenzoic acid substrates (S_n^?) was determined in 28.5% ethanol–water and in water and compared with that of the mixtures of homopolymers. Hydrophobic interactions were important for rate enhancement of the hydrolysis of long-chain ester substrates compared to that of short-chain ester substrates. The copolymers catalyzed the hydrolysis of 3-nitro-4-dodecanoyloxy-benzoic acid (S₁₂^?) about two times faster than the mixtures at pH 7.11 in 28.5% ethanol–water. The hydrolysis of S₁₂^? by the copolymers was about five times faster in water than 28.5% ethanol–water.     

Corrigendum

Three neodymium compounds, Nd(4DNP)₃(C₂H₅OH)₃ (1), Nd(4DNPO)₃ · 7H₂O (2), and {[Nd(μ-ox)(4DNPO)(H₂O)₄] · 4H₂O} _n (3) (4HDNP, 3,5-dinitropyrid-4-one; 4HDNPO, 3,5-dinitropyrid-4-one-N-hydroxide; ox, oxalate), were synthesized and characterized by FT-IR, elemental analysis, thermogravimetry–differential scanning calorimetry (TG–DSC), and two of them by single-crystal X-ray diffraction analyses. The results revealed that in 1, the Nd(III) is surrounded by three chelating ligands and three ethanol solvent molecules. The structure of 3 could be described as 1-D chains in which Nd is bis-bidentately bridged by oxalates, together with a monodentate 3,5-dinitropyrid-4-onate N-oxide 4DNPO ligand and four water molecules as well as four uncoordinated water molecules in the crystal lattice. The origin of the oxalate anions in 3 is probably due to decomposition of the 4DNPO or its oxidation of other species. The TG–DTG (DTG, derivative thermogravimetry) and DSC analyses showed that 1 underwent a three-stage decomposition process. A kinetic equation for decomposition reaction of 2 was also obtained. The apparent activation energy (E _a) and pre-exponential factor (A) of the main decomposition reaction are 157.70 kJ mol^?1 and 10^11.97 s^?1, respectively. The kinetic equation can thus be expressed as dα/dt = 10^11.97(1 ? α)e^{?1.90 × 104/ T} .     

Determination of acid dissociation constants of histidine-containing peptides by proton magnetic resonance spectroscopy

The acid dissociation constant of the imidazolium ring of the decapeptide luliberin has been determined by ¹H NMR-followed titration in D₂O. The normal procedure for the analysis of the titration curve, i.e. direct use of the Henderson-Haselbalch equation, is still applicable in this case, but for more complex peptides a modified calculation procedure is proposed. Results obtained when both methods were applied to luliberin are compared. The influence of D₂O when used as the solvent in this type of determination has been studied using N^α-acetyl-L -histidine methyl ester as a model compound. The difference between the acid dissociation constant of this molecule determined in H₂O and in D₂O implies that a correction of ?.25 unit is needed for those pK_a values calculated by plotting the chemical shifts in D₂O vs the apparent pH meter readings. The pK_a found for N^α-acetyl-L-histidine methyl ester, 6.30 ± 0.04, can be taken as a standard value for histidine-containing peptides.     

Two new metal-organic frameworks possessing binodal high-connected topologies based on Cd4-clusters and organic ligands

Two new compounds, [Cd₂(bptc)(bpimb)(H₂O)]?·?2H₂O (1) and [Cd₂(bptc)(bpib)]?·?4H₂O (2) (where H₄bptc?=?biphenyl-3,3′,4,4′-tetracarboxylic acid, bpimb?=?1,3-bis((2-(pyridin-2-yl)-1H-imidazol-1-yl)methyl)benzene, bpib?=?1,4-bis(2-(pyridin-2-yl)-1H-imidazol-1-yl)butane), were synthesized by reactions of the corresponding metal salts with H₄bptc and N-containing auxiliary ligands and their structures have been determined by single-crystal X-ray diffraction. Compound 1 is built by Cd₄-clusters which further construct a 3-D (3,8)-connected framework with tfz-d notation; 2, also built by Cd₄-clusters, is a 3-D (4,8)-connected framework with (3²?·?4²?·?5²)(3⁴?·?4⁸?·?5¹²?·?6⁴) topology. In addition, the elemental analyses, infrared spectra, fluorescence, and thermogravimetric analyses for 1 and 2 are discussed.     

Amphiphilic block copolymer of 9-vinylphenanthrene and methacrylic acid: Fluorescence quenching of phenanthrene residue in aqueous medium

Amphiphilic block copolymers of 9-vinylphenanthrene (VPh) and methacrylic acid (MA) were prepared by a two-step living anionic polymerization of VPh and trimethylsilyl methacrylate followed by hydrolysis of the trimethylsilyl ester groups. Bis(2-hydroxyethyl) terephthalate, an oxidative quenching agent with amphiphilic nature, strongly quenched the fluorescence of phenanthrene groups in the block copolymer in aquecus solution. Apparent second-order rate constants k_q for the quenching ranged in the magnitude of 10¹¹?10¹²M^?1 s^?1 in the borate (pH 9) and phosphate (pH 7) buffers, whereas those in DMF solution were found to be ～10⁹M^?1 s^?1. No such difference in k_q for the aqueous and DMF solutions was observed with the related random copolymer. The results suggest that a considerable increase in the effective concentration of the quencher around the VPh sequences in the block copolymer resulted from hydrophobic association. Fumaric acid (FA), an anionic quencher, did not quench the fluorescence of the copolymer at pH 9 and 7, presumably because of the lack of accessibility of the quencher to the copolymer due to electrostatic repulsion. However, in neat water in which only a part of the carboxyl groups of MA sequences are dissociated and therefore the charge effect is minimized, FA quenched the fluorescence, with the k_q value approximating the diffusion control limit.     

Equilibrium investigation of complex formation reactions involving copper(II), nitrilo-tris(methyl phosphonic acid) and amino acids,peptides or DNA constitutents. The kinetics,mechanism and correlation of rates with complex stability for metal ion promoted hydrolysis of glycine methyl ester

The complex formation reactions of [Cu(NTP)(OH₂)]^4? (NTP?=?nitrilo-tris(methyl phosphonic acid)) with some selected bio-relevant ligands containing different functional groups, are investigated. Stoichiometry and stability constants for the complexes formed are reported. The results show that the ternary complexes are formed in a stepwise mechanism whereby NTP binds to copper(II), followed by coordination of amino acid, peptide or DNA. Copper(II) is found to form Cu(NTP)H _n species with n?=?0, 1, 2 or 3. The concentration distribution of the various complex species has been evaluated. The kinetics of base hydrolysis of glycine methyl ester in the presence of copper(II)-NTP complex is studied in aqueous solution at different temperatures. It is proposed that the catalysis of GlyOMe ester occurs by attack of OH^? ion on the uncoordinated carbonyl carbon atom of the ester group. Activation parameters for the base hydrolysis of the complex [Cu(NTP)NH₂CH₂CO₂Me]^4? are, ΔH^±?=?9.5?±?0.3?kJ?mol^?1 and ΔS^±?=??179.3?±?0.9?J?K^?1?mol^?1. These show that catalysis is due to a substantial lowering of ΔH^±.     

Four silver-containing coordination polymers based on bis(imidazole) ligands

Four coordination polymers, [Ag(L¹)](m-Hbdc) (1), [Ag(L¹)]₂(p-bdc)?·?8H₂O (2), [Ag(Hbtc)(L¹)][Ag(L¹)]?·?2H₂O (3) and [Ag₂(L²)₂](OH-bdc)₂?·?4H₂O (4), where L¹?=?1,1′-(1,4-butanediyl)bis(imidazole), L²?=?1,2-bis(imidazol-1-ylmethyl)benzene, m-H₂bdc?=?1,3-benzenedicarboxylic acid, p-H₂bdc?=?1,4-benzenedicarboxylic acid, H₃btc?=?1,3,5-benzenetricarboxylic acid, and OH–H₂bdc?=?5-hydroxisophthalic acid, were synthesized under hydrothermal conditions. Compound 1 contains a–Ag-L¹–Ag-L¹–chain and a hydrogen-bonding interaction induced–(m-Hbdc)-(m-Hbdc)–chain. Compound 2 consists of two independent–Ag-L¹–Ag-L¹–chains. P-bdc anions are not coordinated. Hydrogen bonds form a 3D supramolecular structure. A novel (H₂O)₁₆ cluster is formed by lattice water molecules in 2. Compound 3 contains a–Ag-L¹–Ag-L¹–and a–Ag(Hbtc)-L¹–Ag(Hbtc)-L¹–chain. The packing diagram shows a 2D criss-cross supramolecular structure, with?π?···?π?and C–H ···?π?interactions stabilizing the framework. Compound 4 contains a [Ag₂(L²)₂]²⁺ dimer with hydrogen-bonding,?π?··· π, and Ag ··· O interactions forming a 3D supramolecular framework. The luminescent properties for these compounds in the solid state are discussed.     

Viscosity Molecular Weight Determination of Polyadenylic Acid

Abstract

In this study viscosity measurements of polyadenylic acid (PolyA) in aqueous solution were carried out under different conditions. In the absence of any additives, the polymer degraded during flow through the capillary of a viscometer or when standing still. Degradation during the former was more severe. The degradation of polyadenylic acid can be prevented by addition of an electrolyte such as KCl to increase the ionic strength. However, in this case the deviation from linearity was still considerable at most ionic strength values. The best fit to the Huggins and Kraemer equations was obtained using a Tris–EDTA buffer solution with a final pH of 7.65. Estimation from intrinsic viscosity and weight-average molecular weight values gave k and α as 2.04 × 10^?5 and 0.89 from the equation η = kM ^α. The difference between Huggins (k ₁) and Kraemer (k ₁′) constants was close to 0.50 for all measurements.     

Alkoxycarbonyl- and Carboxylate-Group Migrations in the Benzilic Acid Rearrangement of Ethyl Cyclopropane-2, 3-dioxopropionate

In alkaline medium C₃H₅? CO? C (OH)₂? COOEt ( 1b ) is transformed into C₃H₅? C (OH)(COOH)₂ ( 2a ). Labelling experiments show that the cyclopropyl group is not shifted, but only ROOC and/or ^?O₂C groups. GC./MS. and NMR. analysis after incomplete reaction show that both ROOC- and ^?O₂C-groups Migrate; at higher pH (ca. 14) the ester group rearrangement seems to be more important than at pH ca.9-10.     

Activation and racemization of trifluoroacetate esters in the cationic polymerization of styrene

1-Phenylethyl trifluoroacetate ( 1 ) does not react directly with styrene but it is readily incorporated into polymer chains in the presence of an excess of trifluoroacetic acid. The proportion of the nondeuterated 1-phenylethyl end groups in the polymerization of deuterated styrene coinitiated with the acid was much higher than the proportion of the end groups formed by direct incorporation of the acidic protons ([CH₃? CHPh? CD₂? CDPh? …] > [HCD₂? CDPh? CH₂? CDPh? …]). The racemization of the optically active ester-(pseudo-first order rate constant at [HA]₀ = 0.79 mol/L at 20°C equals k^R = 1.7 × 10^?4 S^?1) is more rapid than the incorporation of the ester into polymer chains (k^E = 1.5 × 10^?4 mol^?1 Ls^?1, [M]₀ < 0.4 mol L^?1, i.e., k^R > k^E · [M]). These results and the complete loss of the optical activity in the final polymer indicate that the ester is activated by the acid but it is incorporated into polymer chain via ionic intermediates.     

Three isomeric copper(II) coordination polymers based on a bis-triazole-bis-amide ligand: Assembly,structures, and luminescent properties

Three copper(II) isomers, [Cu(dtcd)(DNBA)₂]_n (1–3) (HDNBA = 3,5-dinitrobenzoic acid, dtcd = N,N-di(4H-1,2,4-triazole)cyclohexane-1,4-dicarboxamide), were synthesized in a one-pot reaction, and structurally characterized. Polymer 1 shows a 1-D single chain in which dtcd connect adjacent Cu²⁺ ions, while DNBA^? is monodentate. In 2, every two Cu²⁺ ions are linked by carboxylate of a DNBA^? in a chelate-bridging mode into a binuclear unit, which is further connected by dtcd ligands into a 1-D double chain. In 3, dtcd connect Cu²⁺ ions via triazole nitrogens to generate 1-D single chains, which are further extended into a 2-D network by the amide oxygens of a dtcb from an adjacent chain. The pH plays an important role in product distribution of 1–3. The coordination behaviors of dtcd and DNBA^? also influence the final structures. Luminescent properties of 1–3 have been investigated.     

Kinetics of oxidation of phenylhydrazine by a μ-oxo diiron(III,III) complex in acidic aqueous media

Phenylhydrazine (R) quantitatively reduces [Fe₂(μ-O)(phen)₄(H₂O)₂]⁴⁺ (1) (phen?=?1,10-phenanthroline) and its conjugate base [Fe₂(μ-O)(phen)₄(H₂O)(OH)]³⁺ (2) to [Fe(phen)₃]²⁺ in presence of excess 1,10-phenanthroline in the pH range 4.12–5.55. Oxidation products of phenylhydrazine are dinitrogen and phenol. The reaction proceeds through two parallel paths: 1?+?R?→?products (k ₁), 2?+?R?→?products (k ₂); neither RH⁺ nor the doubly deprotonated conjugate base of the oxidant, [Fe₂(μ-O)(phen)₄(OH)₂]²⁺ (3) is kinetically reactive though both are present in the reaction media. At 25.0°C, I?=?1.0?M (NaNO₃), the rate constants are k ₁?=?425?±?10?M^?1?s^?1 and k ₂?=?103?±?5?M^?1?s^?1. An inner-sphere, one-electron, rate-limiting step is proposed.