The Effect of Very Bulky Groups on the Equilibrium of Penta- and Hexacoordinated Phosphoranes 1

The synthesis of dithio-diphenol 4 and sulfonyl-diphenol 5, both with very bulky groups, provided starting materials for reaction sequences that led to the formation of the very stable hexacoordinated phosphorane 2 and sensitive pentacoordinated phosphorane 3. Hexacoordination was established in 2 by an intramolecular donor interaction at the phosphorus center from an oxygen atom of the sulfonyl group present as part of the eight-membered ring. The solid state structures of 2 and 3 were established by X-ray analysis, as was that of phosphite 1 formed in the reaction sequence leading to 2. In solution, 2 has two forms existing in a dynamic equilibrium between a pentacoordinated and the more dominant hexacoordinated form as determined by ³¹P and ¹⁹F NMR spectroscopy. The high stability of 2 with respect to hydrolysis and alcoholysis reactions suggests that an associative process is responsible as the controlling reaction mechanism.     

Group-theoretical Foundations for the Concept of Mandalas as Diagrammatical Expressions for Characterizing Symmetries of Stereoisomers

Group-theoretical foundations for the concept of mandalas have been formulated algebraically and diagrammatically in order to reinforce the spread of the unit-subduced-cycle-index (USCI) approach (S. Fujita, Symmetry and Combinatorial Enumeration in Chemistry, Springer-Verlag, Berlin-Heidelberg, 1991). Thus, after the introducton of right coset representations (RCR) (H\)G and left coset representations (LCR) G(/H) for the group G and its subgroup H, a regular body of G-symmetry is defined as a diagrammatical expression for a right regular representation (C ₁\)G, which is an extreme case of RCRs. The |G| substitution positions of the regular body as a reference are numbered in accord with the numbering of the elements of G and segmented into |G|/|H| of H-segments, which are governed by the RCR (H\)G. By regarding each H-segment as a substitution position, the H-segmented regular body is reduced into a reduced regular body, which can be regarded as a secondary skeleton for generating a molecule. The reference regular body (or H-segmented one) is operated by every symmetry operations of G to generate regular bodies (or H-segmented ones), which are placed on the vertices of a hypothetical regular body of G-symmetry. The resulting diagram (a nested regular body) is called a mandala (or a reduced mandala), which is a diagrammatical expression for specifying the G-symmetry of a molecule. The effect of a K-subduction on the regular bodies of a mandala (or a reduced mandala) results in the K-assemblage of the mandala (or the reduced mandala), where the resulting K-assemblies governed by the LCR G(/K) construct a |G|/|K|-membered orbit, which corresponds to a molecule of K-symmetry. The sphericity of the RCR (or the LCR) is used to characterize symmetrical properties of substitution positions and those of stereoisomers. The fixed-point vector for each mandala (or reduced mandala) in terms of row view and the number of fixed points of K-assembled mandalas (or K-assembled reduced mandalas) in terms of column view are compared to accomplish combinatorial enumeration of stereoisomers. The relationship between a mandala and a reordered multiplication table is discussed.     

Conformation of the Unsaturated Uronic Acid Residues of Glycosamtnoglycan Disaccharides

Abstract

Molecular mechanics calculations (using the REFINE package) have been performed on a series of disaccharides obtained by cleavage of glycosaminoglycans with lyases, in order to examine the effect of chemical environment on the conformation of the 4,5-unsaturated uronic acid residue. The disaccharides were derived from heparin and heparan sulfate (1–5), hyaluronic acid (6), chondroitin (7), chondroitin-4-sulfate (8), and chondroitin-6-sulfate (9). The ¹H NMR spectra were analysed for the above compounds and for the unsaturated uronic acid residues of a low-molecular weight E. Coli K5 polysaccharide (10), as well as for the alditol derivative (11) of compound 8; the wide variation of the interproton vicinal coupling constants as a function of configuration and position of the glycosidic linkages and of the sulfation pattern is unequivocally interpreted in terms of equilibrium between two distinct ring forms, namely ²H₁ and ¹H₂. The equilibrium is semi-quantitatively explained by the results of the present energy calculations.     

Synthesis,Characterization, and Thermal and Antibacterial Studies of Diorganotin(Iv) Derivatives of Amino Acids

Abstract

Six diorganotin(IV) derivatives of α-aminoacids with general formulae [(CH₃)₂ SnAACl]₂ and [(CH₃CH₂CH₂CH₂)₂SnAACl]₂, where AA = L-alaninate, L-phenylalaninate, and L-isoleucinate, have been synthesized by reacting dimethyltin(IV) dichloride (M) and dibutyltin(IV) dichloride (B) with L-alanine (A) or L-phenylalanine (PA) or L-isoleucine (I) using acetonitrile as the solvent and designated as MA, MPA, MI, BA, BPA, and BI. These complexes have been characterized by elemental analysis, infrared (IR), ¹H NMR, ¹³C NMR, and ¹¹⁹Sn NMR spectroscopy. Thermal studies of all of the synthesized complexes were also carried out using thermogravimetric (TG) and differential scanning calorimetry (DSC) techniques. The thermal decomposition mechanisms were similar for MA, BA, MI, and BI and occurred in one step, while in compounds MPA and BPA, it occurred in two consecutive steps. The TG curves of MPA and BPA suggest the loss of the ligand (AA) in the first step, with probable formation of a tin oxide R₂SnO as an intermediate, and in the second step, free tin is obtained, similar to MA, BA, MI, and BI, in accordance with the stoichiometry of the related derivatives. The diorganotin(IV) complexes have also been screened for their antibacterial activity against Escherichia coli, Staphylococcus aureus, Staphylococcus epidermidis, and Pseudomonas aeruginosa. The minimum inhibitory concentration values of these complexes show enhanced activity.     

PEG-400 mediated an efficient eco-friendly synthesis of new isoxazolyl pyrido[2,3-d]pyrimidines and their anti-inflammatory and analgesic activity

Abstract

Polyethylene glycol-400 (PEG-400) has been developed as an efficient and eco-friendly reaction medium for the synthesis of new isoxazolyl pyrido[2,3-d]pyrimidine derivatives 11 from isoxazolyl cyanoacetamide synthon 7. Compound 7 was employed with various aromatic aldehydes 8 and malononitrile 9 in the presence of triethylamine (Et₃N) to afford the corresponding (E)-6-amino-1-(3-methyl-5-styrylisoxazol-4-yl)-2-oxo-4-phenyl-1,2-dihydro- pyridine-3,5-dicarbonitrile 10 at room temperature by using PEG-400 as a solvent medium as well as catalyst. The intermediate 10 on treatment with thiourea in the presence of PEG-400 at 90?°C to give the target compounds isoxazolyl pyrido[2,3-d]pyrimidines 11 in good to excellent yields. The newly synthesized compounds 10 and 11 were characterized by IR, ¹H NMR, ¹³C NMR, and HRMS analysis. The target compounds 11a-x was screened for their anti-inflammatory and analgesic activities. Among the tested compounds, the compounds 11s, 11t, 11u, 11v, 11w, and 11x showed significant anti-inflammatory and potent analgesic activities as that of reference drugs. The advantages of this protocol are operational simplicity, catalyst free, environmental safety, wide substrate scope, good yields, and PEG-400 can be recovered and reused. Most significant of all, this protocol is green.     

Supramolecular system composed of B12 model complex and organic photosensitizer: impact of the corrin framework of B12 on the visible-light-driven dechlorination without the use of noble metals

The visible-light-driven dechlorination system without the use of a noble metal has been developed. We screened the combination of cobalt catalysts having square-planar monoanionic ligands (hydrophobic B₁₂ model complex 1/imine-oxime type complex 2) and typical red dyes (Rose Bengal 3/Rhodamine B 4/Nile Red 5) for the construction of a dehalogenation system via a noble-metal-free and visible-light-driven process. The combination of the hydrophobic B₁₂ model complex 1 and Rose Bengal 3 exhibited the highest catalytic activity to 1,1-bis(4-chlorophenyl)-2,2,2-trichloroethane (DDT) to form the monodechlorinated compound, 1,1-bis(4-chlorophenyl)-2,2-dichloroethane, as the major product. The prolonged photocatalysis of DDT by the B₁₂–Rose Bengal system afforded the tri-dechlorinated compound, trans-4,4′-dichlorostilbene, as the major product. Furthermore, we investigated the mechanism of the dehalogenation cycle using various methods such as UV–vis spectroscopy and laser flash photolysis. Finally, we clarified the advantage of using the hydrophobic B₁₂ model complex 1 as an electron acceptor as well as a cobalt catalyst in the organic dye-involved photocatalysis.     

Dapson in Heterocyclic Chemistry,Part II: Antimicrobial and Antitumor Activities of Some Novel Sulfone Biscompounds Containing Biologically Active Thioureido,Carbamothioate, Quinazoline,Imidazolidine, and Thiazole Moieties

The reaction of 4,4′-diisothiocyanato-1,1-diphenylsulfone 2 with aromatic amines and phenol derivatives afforded the corresponding thioureio derivatives 3–9 , respectively. Also, the reaction of 2 with catechol gave the corresponding carbamothioate derivative 11. Quinazoline derivatives 14 and 15 were obtained in good yield via reaction of 2 with anthranlic acid derivatives. Imidazolidine biscompounds 16 and 17 were readily synthesized from the reaction of 2 with N-(4-substituted-phenyl)cyanothioformanilides. The structure of the products was confirmed from elemental analysis as well as spectral data. Most of the synthesized compounds showed remarkable antimicrobial activity compared with chloramphenicol and Grisofluvine as positive controls. Compound 6 was almost as active an antitumor agent as the reference drug Doxorubicin.     

Anomeric O-Alkylation of O-Acetyl-Protected Sugars

Abstract

Anomeric O-alkylation of 2,3,4,6-tetra-O-acetyl-protected glucose, galactose, and mannose (1a-c) and of hepta-O-acetyllactose 5 with decyl triflate (2) in the presence of NaH as the base and in DME or DEE as solvents afforded directly decyl glycosides 3a-c and 5, respectively, in good yields. The anomeric diastereo control is temperature dependent, furnishing at room temperature preferentially the β-anomers. Similarly, reaction of 5 with the triflate 8 of the spacer 7 or with the triflate 10 or nonaflate 11 of 3-O-protected sphingosine 9 gave at room temperature mainly β-lactosides 12 and 13, respectively. Thus, important intermediates for the synthesis of amphiphilic carbohydrate derivatives and for glycoconjugate synthesis are readily accessible.     

Computer-aided molecular modeling and design of DNA-inserting molecules

Summary Intercalators are molecules capable of sliding between base pairs without disturbing the overall stacking pattern. In addition, there may exist molecules capable of inserting into a base pair thereby disrupting the hydrogen bonds and replacing them with new hydrogen bonds. A molecule probably capable of inserting, i.e., an insertor, is the diketopiperazine cyclo-[Gly-Gly] (1). A barbiturate (2), alloxan (3), a pyrimidine derivative (4) and a hydantoin (5) were also studied as possible insertors. Furthermore, molecules such as ethyleneurea (6), succinimide (7), as well as a malonamide derivative (8) and oxamide derivatives (9–11) were studied in order to investigate the arrangement and the number of hydrogen bonds necessary for insertion. Molecules 12–14 were designed and studied for their capacity to act as bisinsertors and/or bisintercalators. These molecules feature two diketopiperazine moieties which are connected via a diphenyl(thio)ether, i.e., 12 and 13, or a bisphenol A spacer, i.e., 14. The latter molecule (14) seems a promising candidate as a bisinsertor.     

Characterization of Quinoxaline Derivatives of Dehydro-D-Erythroascorbic Acid

ABSTRACT

The quinoxaline derivatives formed between dehydro-D-erythroascorbic acid (2) and o-phenylenediamine (3) were separated by preparative HPLC and their structures were analyzed by HPLC-MS, UV-vis spectrophotometry and ¹H NMR spectroscopy. The reaction of 2 with an excess amount of 3 in 5% aq m-phosphoric acid gave three different products, depending on the concentration of 2: below 0.1 mM of 2, only 3-(D-glycero-1,2-dihydroxyethyl)quinoxaline-2-carboxylic γ-lactone (4) was produced, between 0.1 to 5 mM of 2, another product, 2,2′-anhydro-[2-hydroxy-3-(D-glycero-2,3-dihydroxypropanal-1-yl)quinoxaline] (5) was formed as well as 4, and over 10 mM of 2, the third product, 2,1′-anhydro-[2-hydroxy-4-(D-glycero-1,2-dihydroxyethyl)-1,5-benzodiazepin-3-one] (6) was formed as well as 4 and 5, with an overall production yield over 95%. Quinoxaline 6 was slowly converted to 4 via 5. Based on these results, it was concluded that all three products retain the lactone ring moiety of 2, and the most stable product is 4. Compounds 5 and 6 were produced with higher concentration of 2, but they were unstable and slowly converted to 4 in aqueous solution. A possible mechanism for this conversion was proposed.     

用铝-镍合金还原1-萘酚反应的再研究

文献曾报道以铝-镍合金为还原剂, 在稀碱水溶液中, 可以将1-萘酚(1)以高收率还原为5,6,7,8-四氢-1-萘酚(2). 本研究工作发现, 在相同的条件下该反应除了生成少量2外, 3,4-二氢-2H-萘-1-酮(3)和1,2,3,4-四氢-1-萘酚(4)为主要产物, 该结果明显不同于文献报道, 对反应产物分布及其可能机理进行了探讨. 该还原反应体系为3,4-二氢-1(2H)-萘酮(3)和1,2,3,4-四氢-1-萘酚(4)的合成提供了一条新途径.     

A new furan derivative from an endophytic Aspergillus flavus of Cephalotaxus fortunei

A new furan derivative named 5-acetoxymethylfuran-3-carboxylic acid (2), together with a known furan compound, 5-hydroxymethylfuran-3-carboxylic acid (1), were isolated from the fermentation of Aspergillus flavus, endophytic fungi in Cephalotaxus fortunei. The structures of 1 and 2 were elucidated by NMR, IR, UV and MS data, as well as compared with literature data. The compounds 1 and 2 exhibited potent antibacterial activity against Staphylococcus aureus with MIC values of 31.3 and 15.6 μg/mL, respectively. The compound 2 showed moderate antioxidant activity.     

Reactions of Per-O-Acetylglucosyl Isothiocyanate with Enamines. A Route for the Synthesis of Pyrimidine Nucleosides

Abstract

The reaction of 2,3,4,6-tetra-O-acetyl-β-D-glucopyranosyl isothiocyanate with enamines in basic medium to form the glucosylthioamides 9-16, the glucosylthiourea 17, and the nucleoside analogue 18 is reported. The N-halogenophenyl-(1-3, 5-7) and the N-(3,4-dimethoxybenzyl)-(4,8) enaminoesters or enaminones were prepared as precursors for 9-18. The treatment of several of the prepared glucosylthioamides with thiophosgene yields dithioxopyrimidine nucleosides (19-22) with the sugar ring on position 3 of the heterocycle. Glucosylamides are isolated as byproducts. The enamino moieties of the prepared glucosylthioamides and glycosylamides have the EEE configuration and the thioamide or amide bond the Z, anti geometry.     

Cyclodesulfurization of Substituted Thiosemicarbazides into 1,3,4-Oxadiazoles via Hydrazonoyl Chlorides

Abstract

The reaction of thiosemicarbazides 1a–h with hydrazonoyl chlorides 2a–g at ambient temperature, in the presence of triethylamine yielded, in each case, two products. The structure of these compounds was confirmed as 1,3,4-oxadiazoles 14a–h and hydrazonothioates 15a–g. The structure of 15b was confirmed through single crystal X-ray diffraction. A mechanism was proposed for this cyclodesulfurization reaction.     

The effect of locations of triple bond at terphenyl skeleton on the properties of isothiocyanate liquid crystals

Three series of new tolanyl benzene isothiocyanate liquid crystals A, B and C were synthesised with lateral fluorine substituent at different positions and 3,5-difluoro terminal groups. Series D and compound E4 with carbon–carbon triple bond connected with the isothiocyanated benzene were also prepared as reference. Their structures were confirmed using infrared spectrometry, nuclear magnetic resonance and mass spectrometry. The mesomorphic properties, birefringence, dielectric anisotropy and miscibility of these compounds were investigated. Series A exhibits higher clearing points than that of the corresponding compounds D. Series B displays the lowest melting points, the broadest nematic phase temperature range and no smectic phase with increase of the carbon number of alkyl chain. Lateral fluorine in the position of Y (series C) results in an increase of smectic phase. The birefringence (~0.454–0.490) of series A is almost the same as that of the corresponding reference compounds D, while series B shows a decrease of Δn about 0.05 compared with compounds D. For comparison, mixtures formulated by A and B exhibit higher clearing points and better low temperature stability than those of the mixtures based compounds D in the same fraction.     

Short Synthesis of Functionalized Cyclic Homoallylsilanes

The synthesis of functionalized cyclic homoallylsilanes 5 and 6 was described starting from functional cycloalkenols 1 and 2, in which the addition of silylcuprate to the functional acetates 3 and 4 were used as the key reaction step.     

Synthesis of the Methyl Glycosides of a Di- and Two Trisaccharide Fragments Specific for the Shigella flexneri Serotype 2a O-Antigen

ABSTRACT

The stereocontrolled synthesis of methyl α-D-glucopyranosyl-(1→4)-α-L-rhamnopyranoside (EC, 1), methyl α-L-rhamnopyranosyl-(1→3)-[α-D-glucopyranosyl-(1→4)]-α-L-rhamnopyranoside (B(E)C, 3) and methyl α-D-glucopyranosyl-(1→4)-α-L-rhamnopyranosyl-(1→3)-2-acetamido-2-deoxy-β-D-glucopyranoside (ECD, 4) is described; these constitute the methyl glycosides of branched and linear fragments of the O-specific polysaccharide of Shigella flexneri serotype 2a. Emphasis was put on the construction of the 1,2-cis EC glycosidic linkage resulting in the selection of 2,3,4,6-tetra-O-benzyl-α-D-glucopyranosyl fluoride (8) as the donor. Condensation of methyl 2,3-O-isopropylidene-4-O-trimethylsilyl-α-L-rhamnopyranoside (11) and 8 afforded the fully protected αE-disaccharide 20, as a common intermediate in the synthesis of 1 and 3, together with the corresponding βE-anomer 21. Deacetalation and regioselective benzoylation of 20, followed by glycosylation with 2,3,4-tri-O-benzoyl-α-L-rhamnopyranosyl trichloroacetimidate (15) afforded the branched trisaccharide 25. Full deprotection of 20 and 25 afforded the targets 1 and 3, respectively. The corresponding βE-disaccharide, namely, methyl β-D-glucopyranosyl-(1→4)-α-L-rhamnopyranoside (βEC, 2) was prepared analogously from 21. Two routes to trisaccharide 4 were considered. Route 1 involved the coupling of a precursor to residue E and a disaccharide CD. Route 2 was based on the condensation of an appropriate EC donor and a precursor to residue D. The former route afforded a 1:2 mixture of the αE and βE condensation products which could not be separated, neither at this stage, nor after deacetalation. In route 2, the required αE-anomer was isolated at the disaccharide stage and transformed into 2,3,4,6-tetra-O-benzyl-α-D-glucopyranosyl-(1→4)-2,3-di-O-benzoyl-α-L-rhamnopyranosyl trichloroacetimidate (48) as the EC donor. Methyl 2-acetamido-2-deoxy-4,6-O-isopropylidene-β-D-glucopyran-oside (19) was preferred to its benzylidene analogue as the precursor to residue D. Condensation of 19 and 48 and stepwise deprotection of the glycosylation product afforded the target 4.     

Reactivity of Z- and E-isomers of 2-benzamido-3-phenylacrylohydrazide towards some carbon electrophiles. A comparative study

Z- and E-isomers of 2-benzamido-3-phenylacrylohydrazide 2a, 2b have different relative reactivities towards some carbon electrophiles had been discussed.The Z-isomer underwent cyclization to give imidazole derivative 3 and triazine derivative 4, whereas the latter E-isomer does not undergo such cyclization. The reaction of 2a and/or 2b with 1,2-dibenzylidene hydrazine at different reaction conditions afforded the Schiff bases 6, 8 and the triazolidine derivative 9. Reactions of 2a, 2b with formic acid and phthalic anhydride gave the different cyclization products 10–14, respectively. The structures of all the new synthesized compounds were established from their IR, ¹H-NMR and mass spectra as well as elemental analyses.     

Transformation of acridines and azepines into the corresponding 3-oxo-heterocycles by means of hypervalent aromatic iodine compounds

Summary The acridines3,5, and6, as well as the dibenzo[b,f]-azepine4 were converted into the 3-oxo-derivatives7–10 using hypervalent iodine compounds (iodosylbenzene and bis-(trifluoroacetoxy)iodopentafluorobenzene).

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Oxidation von Acridinen und Azepinen in ihre 3-Oxoderivate mit Hilfe von hypervalenten aromatischen Jodverbindungen (Kurze Mitt.)

Zusammenfassung Die Acridine3,5 und6 sowie das Dibenzo[b,f]azepin4 wurden mit Hilfe der beiden hypervalenten Jod-Verbindungen Jodosobenzol (1) und Bis-trifluoroacetoxyiodbenzol (2) zu den entsprechenden 3-Acridinonen7,9 und10 sowie zum Dibenzoazepin-3-on8 oxidiert.