Synthesis of Optically Active P‐Chiral and Optically Inactive Oligophosphines

A series of optically active P‐chiral oligophosphines (S,R,R,S)‐ 2 , (S,R,S,S,R,S)‐ 3 , (S,R,S,R,R,S,R,S)‐ 4 , and (S,R,S,R,S,R,R,S,R,S,R,S)‐ 5 with four, six, eight, and 12 chiral phosphorus atoms, respectively, were successfully synthesized by a step‐by‐step oxidative‐coupling reaction from (S,S)‐ 1 . The corresponding optically inactive oligophosphines 1′ – 5′ were also prepared. Their properties were characterized by DSC, XRD, and optical‐rotation analyses. While optically active bisphosphine (S,S)‐ 1 and tetraphosphine (S,R,R,S)‐ 2 behaved as small molecules, octaphosphine (S,R,S,R,R,S,R,S)‐ 4 and dodecaphosphine (S,R,S,R,S,R,R,S,R,S,R,S)‐ 5 exhibited the features of a polymer. Furthermore, DSC and XRD analyses showed that hexaphosphine (S,R,S,S,R,S)‐ 3 is an intermediate between a small molecule and a polymer. Comparison of optically active oligophosphines 1 – 5 with the corresponding optically inactive oligophosphines 1′ – 5′ revealed that the optically active phosphines have higher crystallinity than the optically inactive counterparts. It is considered that the properties of oligophosphines depend on the enantiomeric purity as well as the oligomer chain length.     

Synthesis, π‐Face‐Selective Aggregation,and π‐Face Chiral Recognition of Configurationally Stable C3‐Symmetric Propeller‐Chiral Molecules with a π‐Core

The C₃‐symmetric propeller‐chiral compounds (P,P,P)‐ 1 and (M,M,M)‐ 1 with planar π‐cores perpendicular to the C₃‐axis were synthesized in optically pure states. (P,P,P)‐ 1 possesses two distinguishable propeller‐chiral π‐faces with rims of different heights named the (P/L)‐face and (P/H)‐face. Each face is configurationally stable because of the rigid structure of the helicenes contained in the π‐core. (P,P,P)‐ 1 formed dimeric aggregates in organic solutions as indicated by the results of ¹H NMR, CD, and UV/Vis spectroscopy and vapor pressure osmometry analyses. The (P/L)/(P/L) interactions were observed in the solid state by single‐crystal X‐ray analysis, and they were also predominant over the (P/H)/(P/H) and (P/L)/(P/H) interactions in solution, as indicated by the results of ¹H and 2D NMR spectroscopy analyses. The dimerization constant was obtained for a racemic mixture, which showed that the heterochiral (P,P,P)‐ 1 /(M,M,M)‐ 1 interactions were much weaker than the homochiral (P,P,P)‐ 1 /(P,P,P)‐ 1 interactions. The results indicated that the propeller‐chiral (P/L)‐face interacts with the (P/L)‐face more strongly than with the (P/H)‐face, (M/L)‐face, and (M/H)‐face. The study showed the π‐face‐selective aggregation and π‐face chiral recognition of the configurationally stable propeller‐chiral molecules.     

Kinetics and Protein‐Inhibitor Docking Studies of Enantiomers of exo‐2‐Norbornyl‐N‐n‐butylcarbamates as Pseudomonas Lipase Inhibitors to Probe the Enantioselectivity of the Enzyme

The Pseudomonas species lipase inhibition shows enantioselectivity for R‐enantiomer over S‐enantiomer of exo‐2‐norbornyl‐N‐n‐butylcarbamates. R‐, S‐, and racemic‐exo‐2‐norbornyl‐N‐n‐butylcarbamates are all characterized as pseudo substrate inhibitors of the enzyme. Thus, the mechanism for Pseudomonas species lipase‐catalyzed hydrolysis of the inhibitor is formation of the first enzyme‐inhibitor Michaelis complex via nucleophilic attack of the active site serine to the inhibitor (K_i step) then formation of the butylcarbamyl enzyme intermediate from this complex (k₂ step). Comparison of bimolecular rate constants (k_i = k₂ / K_i) of the inhibitors indicates that R‐enantiomer is 1.8 times more potent than S‐enantiomer. Thus, Pseudomonas species lipase shows enantioselectivity of 1.8 for R‐exo‐2‐norbornyl‐N‐n‐butyl‐carbamate over S‐exo‐2‐norbornyl‐N‐n‐butylcarbamate. Protein‐ligand interaction studies on both enantiomers of exo‐2‐norbornyl‐N‐n‐butylcarbamate as inhibitors of Pseudomonas species lipase using AutoDock suggest that R‐enantiomer binds more tightly into the active site of the enzyme than S‐enantiomer. The norbornyl ring of S‐exo‐2‐norbornyl‐N‐n‐butylcarbamate is repulsive to Ser 82 and His 251 of the catalytic triad as well as to Met 16 of the oxyanion hole. These repulsions may create few unfavorable interactions between S‐exo‐2‐norbornyl‐N‐n‐butylcarbamate and the enzyme and make this inhibitor a less potent one.     

On p -nilpotency and minimal subgroups of finite groups

We call a subgroup H of a finite group G c-supplemented in G if there exists a subgroup K of G such that G = HK and H ∩ K ≤ core(H). In this paper it is proved that a finite group G is p-nilpotent if G is S ₄-free and every minimal subgroup of P ∩ G ^N is c-supplemented in N _G(P), and when p = 2 P is quaternion-free, where p is the smallest prime number dividing the order of G, P a Sylow p-subgroup of G. As some applications of this result, some known results are generalized.     

On molecular topological properties of hex‐derived networks

Topological indices are numerical parameters of a molecular graph, which characterize its topology and are usually graph invariant. In quantitative structure–activity relationship/quantitative structure–property relationship study, physico‐chemical properties and topological indices such as Randić, atom–bond connectivity (ABC), and geometric–arithmetic (GA) index are used to predict the bioactivity of chemical compounds. Graph theory has found a considerable use in this area of research. In this paper, we study hex‐derived networks HDN1(n) and HDN2(n), which are generated by hexagonal network of dimension n and derive analytical closed results of general Randić index R_α(G) for different values of α, for these networks of dimension n. We also compute the general first Zagreb, ABC, GA, ABC₄, and GA₅ indices for these hex‐derived networks for the first time and give closed formulae of these degree‐based indices for hex‐derived networks. Copyright © 2016 John Wiley & Sons, Ltd.     

N-Glucosides of Aminobenzoic Acids and Aminophenols

N-o-, -m-, and -p-carboxyphenyl-D-glucosylamines and N-o-, -m-, and -p-hydroxyphenyl-D-glucosylamines were synthesized by reaction of D-glucose with o-, m-, and p-aminobenzoic acids and o-, m-, and p-aminophenols. It was demonstrated that both - and -anomers were formed by N-glycosylation of o-, m-, and p-aminobenzoic acids; only -anomers, by N-glycosylation of o-, m-, and p-aminophenols.     

Stereoselective and Enantioselective Syntheses of the Four Stereoisomers of Muscol from (3RS)‐Muscone

Two trans stereoisomers of 3‐methylcyclopentadecanol (=muscol), (1R,3R)‐ 2 and (1S,3S)‐ 2 , were efficiently synthesized from (3RS)‐3‐methylcyclopentadecanone (=muscone; (3RS)‐ 1 ) by a highly stereoselective reduction (Scheme). L‐Selectride^® (=lithium tri(sec‐butyl)borohydride) was used, followed by the enantiomer resolution by lipase QLG (Alcaligenes sp.). The cis stereoisomers of muscol, (1S,3R)‐ 2 and (1R,3S)‐ 2 , were obtained by the Mitsunobu inversion of (1R,3R)‐ 2 and (1S,3S)‐ 2 , respectively (Scheme). The absolute configuration of (1R,3R)‐ 2 was determined by X‐ray crystal‐structure analysis of its 3‐nitrophthalic acid monoester, 2‐[(1R,3R)‐3‐methylcyclopentadecyl hydrogen benzene‐1,2‐dicarboxylate ((1R,3R)‐ 3b ), and by oxidation of (1R,3R)‐ 2 to (3R)‐muscone.     

Biodegradation of Polyhydroxyalkanoate Films in Natural Environments

Summary: Biodegradation of film specimens from polyhydroxyalkanoates (PHAs) of two types – poly-3-hydroxybutyrate (PHB) and poly-3-hydroxybutyrate-co-3-hydroxyvalerate (PHBV) – was analysed in different environments: tropical sea waters of the South China Sea (Nha Trang, Vietnam) and soils in the environs of Hanoi (Vietnam), Nha Trang (Vietnam) and Krasnoyarsk (Siberia, Russia). In seawater, the mass loss of the specimens of both types was almost equal. However, in tropical soils, PHB degraded quicker than PHBV. In the Siberian soil, the degradation rate of the PHBV was generally higher than that of PHBV. Analysis of molecular mass of PHA specimens showed its decreasing during biodegradation. In the tropical sea conditions, PHA degrading microorganisms were represented by bacteria of Enterobacter, Bacillus and Gracilibacillus genera. Among PHA degrading bacteria, Burkholderia, Alcaligenes, Bacillus, Mycobacterium and Streptomyces genera were identified in Vietnamese soils, and Variovorax, Stenotrophomonas, Acinetobacter, Pseudomonas, Bacillus and Xanthomonas genera in Siberian soils. Micromycetes of Gongronella, Paecilomyces, Penicillium and Trichoderma genera exhibited PHA degrading activity in Vietnamese soils, and Paecilomyces, Penicillium, Acremonium, Verticillium and Zygosporium genera – in Siberian soils.     

The spread of unicyclic graphs with given size of maximum matchings

The spread s(G) of a graph G is defined as s(G) = max _i,j |λ _i − λ _j |, where the maximum is taken over all pairs of eigenvalues of G. Let U(n,k) denote the set of all unicyclic graphs on n vertices with a maximum matching of cardinality k, and U ^*(n,k) the set of triangle-free graphs in U(n,k). In this paper, we determine the graphs with the largest and second largest spectral radius in U ^*(n,k), and the graph with the largest spread in U(n,k).      

Boron complexes of S-trityl- -cysteine and S-tritylglutathione

S-Trityl- -cysteine and S-tritylglutathione have been converted to 1,3,2-oxazaborolidine-5-ones by reaction with B-methoxydialkylborane derivatives. The synthesis of dicyclohexyl[S-trityl-(R)-cysteinato-O,N]boron (2), diisopinocampheyl[S-trityl-(R)-cysteinato-O,N]boron (3) and 9-borabicyclo[3.3.1]non-9-yl[S-tritylglutathionato-O,N]boron (5), dicyclohexyl[S-tritylglutathionato-O,N]boron (6) and diisopinocampheyl[S-tritylglutathionato-O,N]boron (7) from S-trityl- -cysteine and S-tritylglutathione, respectively, with potential application in boron neutron capture therapy is reported. The structure of 9-borabicyclo[3.3.1]non-9-yl[S-trityl-(R)-cysteinato-O,N]boron 1 has been determined by X-ray diffraction.     

Approximate formulae for calculation of the integral òT0Tmexp(-E/RT)dT

Summary In this paper two approximate formulae have been developed for calculation of the integral ò^T₀T^mexp(-E/RT)dT by using integration-by-parts approaches. They are in the following forms: I(m,T) = (RT^m+2)/(E+(m+2)RT)exp(-E/RT) I(m,T) = (RT^m+2)/(E+(m+2)(0.00099441E+0.93695599RT)exp(-E/RT) The validity of the two formulae has been confirmed and their accuracies have been tested with data from numerical calculating. In contrast to existing other integral methods, both the present approaches are simply used, accurate, and can be used for arbitrary values of m.     

Isomorphism in electron-pair densities of atoms

The spherically averaged electron-pair intracule (relative motion) h(u) and extracule (center-of-mass motion) d(R) densities are a couple of densities which characterize the motion of electron pairs in atomic systems. We study a generalized electron-pair density (q; a, b) that represents the probability density function for the magnitude of two-electron vector a r _j +b r _k of any pair of electrons j and k to be q, where a and b are nonzero real numbers. In particular, h(u)=g(u;1, −1) and d(R) = . It is shown that the scaling property of the Dirac delta function and the inversion symmetry of orbitals in atoms due to the central force field generate several isomorphic relations in the electron-pair density (q; a, b) with respect to the two parameters a and b. The approximate isomorphism d(R)≅8h(2R) known in the literature between the intracule and extracule densities is a special case of the present results. Received: 24 May 2000 / Accepted: 18 July 2000 / Published online: 27 September 2000     

S‐endo‐2‐Norbornyl‐N‐n‐butylcarbamate as a Potential Pseudomonas Lipase Inhibitor to Probe the Enantioselectivity of the Enzyme by Kinetic and Molecular Docking Evaluation

Obesity is a complex health issue and it can cause many health and social problems. Previous studies reported that lipase is a main target for obesity treatment. We synthesized R‐exo‐2‐norbornyl‐N‐n‐butylcarbamate and S‐exo‐2‐norbornyl‐N‐n‐butylcarbamate as potential pseudomonas lipase inhibitors to probe the enantioselectivity of the enzyme and demonstrated that R‐exo‐2‐norbornyl‐N‐n‐butylcarbamate had better enzyme enantioselectivity, ki and the docking model with Pseudomonas species lipase in our previous studies. In this article, we reported the property of the Pseudomonas species lipase inhibitors, R‐and S‐endo‐2‐norbornyl‐N‐n‐butylcarbamate and compared the docking models of these two compounds with R‐ and S‐exo‐2‐norbornyl‐N‐n‐butylcarbamates by AutoDock. We found that S‐endo‐2‐norbornyl‐N‐n‐butylcarbamate has the best enantioselectivity, ki and docking model and this study could provide useful information about enzyme enantioselectivity for the development of Pseudomonas species lipase inhibitors for obesity treatment.     

Quantum chemical study of the host-guest inclusion complexes of the local anaesthetic drugs, procaine hydrochloride and butacaine hydrochloride, with α- and β-cyclodextrins

Quantum mechanical (QM) calculations were carried out in order to study the host-guest inclusion complexes of procaine hydrochloride (Pro-H) and butacaine hydrochloride (But-H) with α- and β-cyclodextrins (α- and β-CDs) by PM3 and AM1 methods. The systems were studied by a 1:1 (α-CD/Pro-H, α-CD/But-H, β-CD/Pro-H, and β-CD/But-H) stoichiometric ratio. In this work we calculated the energy of complex formation in vacuo, and this investigation was carried out on the basis of the host-guest approach. The stabilization energy results for the 1:1 host-guest inclusion complexes indicate that the β-CD/Pro-H complex is more stable than the α-CD/Pro-H complex. Furthermore, stabilization energy for the 1:1 inclusion complex of α-CD with But-H is lower than that for the 1:1 inclusion complex of β-CD with But-H. The calculation results show that all complexation processes for the four complexes are exothermic. Enthalpy changes for the α-CD/But-H and β-CD/Pro-H host-guest inclusion complexes are more negative than those for the other ones. ΔG ^o values for both the β-CD/Pro-H and α-CD/But-H complexes are negative. Correspondence: S. M. Hashemianzadeh, Department of Physical Chemistry, College of Chemistry, Iran University of Science and Technology, Tehran, Iran.     

STUDY ON LIGHTLY SULFONATED SYNDIOTACTIC POLYSTYRENE IONOMERS

Sulfonated syndiotactic polystyrene ionomers (SsPS) with 1.8 mol% degree of sulfonation have been studied.WAXD shows that the crystallinity of SsPS ionomers was decreased with increasing diameter size of the counter ions andsPS>SsPS-H>SsPS-K>SsPS-Zn. Moreover, SsPS ionomers only have a α cystal form, while original sPS has two crystalforms: α and β crystal form. TGA shows that the thermal stability of SsPS ionomers is higher than that of the original sPSand SsPS-Zn>SsPS-K>SsPS-H. DSC shows that all the glass transition temperatures (T_g) of SsPS ionomers are higherthan that of the neat sPS and SsPS-Zn>SsPS-Na>SsPS-K>SsPS-H. However, the melting temperature (T_m) andcrystallization peak temperature (T_p) of SsPS ionomers are lower and SsPS-H>SsPS-Zn>SsPS-K>SsPS-Na, while thecrystallinity (X_c) of SsPS-Zn is the lowest. Nonisothermal crystallization kinetics shows that the Avrami index of sPS andSsPS-H are both about 4, suggesting the nucleation growth of SsPS-H with lower degree of sulfonation still keeps its three-dimension form. FTIR spectra of SsPS ionomers show a splitting absorption band for asymmetric stretching vibration ofsulfonation group. The CH in-plane bending vibration of benzene ring shifted to higher wavenumber and the symmetricstretching vibration of sulfonation group changed slightly with different counter ion neutralized SsPS ionomers.     

Discrepancy in the near-solute electric dipole moment calculated from the electric field

The electric dipole moment p ( r ) was computed as the integral of the permanent dipole moment of the solvent molecule μ( r ) weighted by the orientational probability distribution Ω( r ; O ) over all orientations, where O is the orientation of the solvent molecule at r . The relationship between Ω( r ; O ) and the potential of the mean torque was derived; p ( r ) is proportional to the electric field E ( r ) under the following assumptions: (1) the van der Waals (vdW) interaction is independent of the orientation of the solvent molecule at r ; (2) the solvent molecule and its electrical effect are modeled as a point dipole moment; (3) the solvent molecule at r is in a region far from the solute; and (4) μE( r ) ? k_BT, where k_B is Boltzmann's constant and T is absolute temperature. The errors caused by calculating near‐solute Ω( r ) and p ( r ) from E ( r ) are unclear. The results show that Ω( r ) is inconsistent with the value calculated from E ( r ) for water molecules in the first and second shells of solute with charge state Q = ±1 e, and a large variation in solvent molecular polarizability γ_mol(r), which appeared in the first valley of 4πr²E(r) for |Q| < 1 e. Nonetheless, p (r) is consistent with the values calculated from E (r) for |Q| ≤ 1 e. The implication is that the assumptions for calculating p ( r ) can be ignored in the calculation of the solvation free energy of biomolecules, as they pertain to protein folding and protein–protein/ligand interactions. © 2011 Wiley Periodicals, Inc. J Comput Chem, 2011     

Ordering chemical unicyclic graphs by Wiener polarity index

Suppose G is a chemical graph with vertex set V(G). Define D(G) = {{u, v} ⊆ V (G) | d _G (u, v) = 3}, where d _G (u, v) denotes the length of the shortest path between u and v. The Wiener polarity index of G, W _p (G), is defined as the size of D(G). In this article, an ordering of chemical unicyclic graphs of order n with respect to the Wiener polarity index is given.     

Two New Spirostanol Saponins from Reineckia carnea

Two new spirostanol saponins, (1β,3β,5β,25S)‐spirostan‐1,3‐diol 1‐(β‐D ‐xylopyranoside) ( 1 ) and (1β,3β,5β,25S)‐spirostan‐1,3‐diol 1‐[α‐L ‐rhamnopyranosyl‐(1→2)‐β‐D ‐fucopyranoside] ( 2 ), along with two known compounds, (1β,3β,5β,25S)‐spirostan‐1,3‐diol 1‐[α‐L ‐rhamnopyranosyl‐(1→2)‐β‐D ‐xylopyranoside] ( 3 ) and (1β,3β,4β,5β,25S)‐spirostan‐1,3,4,5‐tetrol 5‐(β‐D ‐glucopyranoside) ( 4 ) were isolated from the whole plant of Reineckia carnea. The structures of the new steroids were determined by detailed analysis of their 1D‐ and 2D‐NMR spectra and chemical methods, and by comparison with spectral data of known compounds. Compounds 3 and 4 were isolated from the genus Reineckia for the first time.     

Acute Toxicity of Cresols to Pseudomonas — An Initial Oxygen Uptake Method

Acute toxicity of cresols to both Pseudomonas I and II was estimated by an initial oxygen uptake method. Inhibition studies of toluene and cresols on the oxidation of either benzoate by Pseudomnas I or phenol by Pseudomonas II were analyzed and expressed as oxygen uptake rates. Double reciprocal plots for the inhibiton by cresols of oxygen uptake in Pseudomonas, two physical constants, Vmaxi and Ki, were obtained. The Vmaxi of o?, m? and p-cresol were 80%, 81% and 57% of Vmax in Pseudomnas I, and 10%, 25% and 36% in Pseudomonas II, respectively. Thus, the toxicity to Pseudomonas I decreases in the order p- > o- ≥ m-cresol, whereas to Pseudomonas II, the order is changed to o- > m- > p-cresol. This difference in the toxicity order is probably due to the allosteric effect of p-cresol towards Pseudomonas II. Inasmuch as most compounds inhibit noncompetively, the relative toxicity of different compounds can be estimated by a new toxicity parameter RI (relative inhibition) which is defined as 100/Ki. By comparing the RI value of each compound, the toxicity to Pseudomonas I decreases in the order m-chlorophenol > p-cresol > p-chlorophenol > o-cresol ≥ m-cresol > o-chlorophenol > toluene > phenol.     

Experimental determination of the electron elastic backscattering probability and the surface excitation parameter for Si,Ni, Cu and Ag at 0.5 and 1 keV energies

Electron spectra are generally presented in arbitrary units. The experimental elastic peak intensity I_espec(E) is determined by the elastic backscattering probability I_e(E) of electrons backscattered elastically within the solid angle of the spectrometer. The experimental elastic peak I_espec(E) is converted to I_e(E) backscattering probability using our new procedure based on the Goto i_e(E) elastic backscattering current database. The elastic backscattering probability I_c(E) was calculated applying the EPESWIN software of Jablonski. I_e(E) < I_c(E) due to the surface losses of electrons, characterized by the surface excitation parameter P_se (SEP). P_se(E) was determined experimentally using the Goto database and the relationship of Tanuma. Our new procedure is applied to angular‐resolved (AREPES) spectra of Jablonski and Zemek presented in arbitrary units. In their AREPES experiments, the experimental elastic peak intensity I_espec = I_e(E, α_d, ΔΩ) was measured at α_d angle of detection (35–74°) with a small HSA, with ΔΩ solid angle. The experimental value at 42° $I_{e}(E, {\it{42}}\deg{\hbox{}}, {\Delta}\Omega)$ was converted to probability with the Goto database. It was corrected with a SEP parameter P_se, determined by trial and error method for Si, Ni, Cu and Ag for E = 0.5 and 1 keV primary energies. Copyright © 2010 John Wiley & Sons, Ltd.