Fine tuning of molecular rotor function in photochemical molecular switches

Molecular switches are used as scaffolds for the construction of controlled molecular rotors. The internal position of the switching entity in the molecule controls the dynamic behaviour of the rotor moiety in the molecule. Six new molecular motors with o-xylyl rotor moieties were prepared on the basis of an overcrowded alkene, and their dynamics were systematically studied by 2D EXSY NMR. Variation of the (hetero-)atoms in the upper and lower halves of the overcrowded alkene allows fine tuning of the rate of rotation of the o-xylyl rotor in the lower half of the molecule. For all rotors it was observed that the rotation barrier for the trans-isomer was higher than that of the corresponding cis-isomer. The results are analyzed and discussed in terms of differences in steric interactions in the presented system.     

Control of rotor function in light-driven molecular motors

A study is presented on the control of rotary motion of an appending rotor unit in a light-driven molecular motor. Two new light driven molecular motors were synthesized that contain aryl groups connected to the stereogenic centers. The aryl groups behave as bidirectional free rotors in three of the four isomers of the 360° rotation cycle, but rotation of the rotors is hindered in the fourth isomer. Kinetic studies of both motor and rotor functions of the two new compounds are given, using (1)H NMR, 2D-EXSY NMR, and UV-vis spectroscopy. In addition, we present the development of a new method for introducing a range of aryl substituents at the α-carbon of precursors for molecular motors. The present study shows how the molecular system can be photochemically switched between a state of free rotor rotation and a state of hindered rotation and reveals the dynamics of coupled rotary systems.     

Electron-triggered motions in technomimetic molecules

Technomimetic molecules are molecules designed to imitate macroscopic objects at the molecular level, also transposing the motions that these objects are able to undergo. This article focuses on technomimetic molecules with motions triggered by electrons. The first part is devoted to our work in the field of molecular switches: after having demonstrated the possibility of controlling an intramolecular electron transfer by photoisomerisation, we are now trying to control the isomerisation, either by electrochemistry, or by embedding the photochromic compound in a self-assembled monolayer and testing the electrical conduction with a STM tip. In a second part, we present our strategy on controlling the rotation in a molecular rotary motor and the family of ruthenium complexes designed to perform such a task. The molecules have a piano-stool structure with a "stator" meant to be grafted on an oxide surface, and a "rotor" bearing redox-active groups, so that addressing the molecule with nano-electrodes would trigger rotation. The electrical control of the charge state of a molecule by a STM tip is developed in a final part.     

A molecular balloon: expansion of a molecular gyrotop cage due to rotation of the phenylene rotor

A macrocage molecule with a bridged phenylene rotor has been reported as a molecular gyrotop, because the rotor can rotate even in a crystalline state. Although the most stable cage structure of the molecular gyrotop in a crystal was folded and shrunken at low temperature, expansion of the cage was observed at high temperature due to rapid rotation of the phenylene in a crystal. This phenomenon is analogous to the deflation and inflation of a balloon. Moreover, the unusually large thermal expansion coefficient of the crystal was estimated in the temperature range in which the expansion of the cage was observed, indicating a new function of dynamic states of the molecules.     

Design of a molecular memory element with an alternating circular array of dipolar rotors and rotation suppressors

As a new element for electric-field driven molecular memory, we developed a hexaarylbenzene derivative in which three difluorophenyl groups and three aryl groups as a dipolar rotor and a rotation suppressor, respectively, are alternately positioned on the central benzene core. This molecule has two rotational isomeric forms, both of which preserve their conformational states at room temperature but exhibit interconversion at high temperatures. Amorphous thin films fabricated from the hexaarylbenzene show a reversible change in surface potential by application of electric fields.

A hexaarylbenzene derivative with an alternating circular array of dipolar rotors and rotation suppressors holds promise as a new element for electric-field driven molecular memory.     

Exploring the boundaries of a light-driven molecular motor design: new sterically overcrowded alkenes with preferred direction of rotation

Insight in the steric and electronic parameters governing isomerization processes in artificial molecular motors is essential in order to design more advanced motor systems. A subtle balance of steric parameters and the combination of helical and central chirality are key features of light-driven unidirectional rotary molecular motors constructed so far. In an approach to decrease the steric hindrance around the central olefinic bond (rotary axis) and thereby lowering the energy barrier for helix inversion resulting in an increased rotation rate, the boundaries of our molecular motor design are explored. In a new design of a light-driven molecular motor based on a sterically overcrowded alkene the methyl substituent adjacent to the stereogenic center, which is responsible for the control of the direction of rotation, is shifted one position away from the fjord region of the molecule compared to the second-generation motor systems. In contrast to previously developed light-driven molecular motors, there is a preference for the methyl substituent to adopt a pseudo-equatorial orientation. Nevertheless, this new type of motor is capable of functioning as a rotary molecular motor, albeit not with full unidirectionality. Under the combined influence of light and heat, there is a preferred clockwise rotation of one half of the molecule. Surprisingly, the effect of shifting the methyl substituent on the energy barrier for helix inversion is small and even a slight increase in the barrier is observed.     

The photophysical properties of a julolidene-based molecular rotor

The photophysical properties of 9-dicyanovinyljulolidine are sensitive to solvent viscosity but are little affected by changes in polarity. In fluid solution, the lifetime of the first-excited singlet state is very short and triplet state formation cannot be detected by laser flash photolysis. Decay of the excited singlet state is strongly activated and weak phosphorescence can be observed in a glassy matrix at 77 K. Temperature dependent 1H NMR studies indicate that the molecule undergoes slow internal rotation in solution, for which the activation energy has a value of ca. 35 kJ mol(-1). This process is unlikely to account for the poor fluorescence quantum yield found in fluid solution. Instead, it is considered that the target compound undergoes rapid rotation around the dicyanovinyl double bond from the excited singlet state. The rate of rotation depends weakly on the viscosity of the solvent in a range of linear alcohols at room temperature. This might represent the fact that the rotor is relatively small and can pack into cavities in the solvent structure. In glycerol, the rate of rotation is more sensitive to viscosity effects but a quite complex temperature dependence is observed in ethanol. Here, the rate is almost activationless in a glassy matrix and in fluid solution at high temperature but strongly activated at intermediate temperatures.     

Theoretical design of a light-driven molecular rotary motor with low energy helical inversion: 9-(5-methyl-2-phenyl-2-cyclopenten-1-ylidene)-9H-fluorene

A light-driven molecular rotary motor of 9-(5-methyl-2-phenyl-2-cyclopenten-1-ylidene)-9H-fluorene (MPCPF) has been designed by means of ab initio complete active space self-consistent field and its second order multireference M?ller-Plesset perturbation methods. In the present model molecule of MPCPF, 9H-fluorene (as a stator) and 5-methyl-2-phenyl-2-cyclopenten-1-ylidene (as a rotor) are directly linked with each other by a C═C double bond. Even by a substitution of phenyl group, MPCPF comes to have a stable P-helical MPCPF and a metastable M-helical MPCPF, and exhibits unidirectionality around the C═C double bond. In addition, interchange of the helicity can proceed with a low energy barrier through a floppy phenyl torsional motion. This is in contrast to previous light-driven molecular rotary motors where the unidirectionality is ensured by rigid and sterically overcrowded rotors. In the full rotary process of MPCPF, therefore, constancy of the rotation speed is expected to be much more improved as well as unidirectionality.     

Porphyrin-based switchable molecular turnstiles

The design, synthesis and structural characterisation, in solution, of two new molecular turnstiles based on Sn-porphyrin derivatives are described. The system is composed of a stator (5-(4-pyridyl)-10,15,20-triphenylporphyrin), a hinge (Sn(IV)) and a rotor (handle equipped with 2,6-pyridinedicarboxamide as a tridentate coordinating site or its Pd(II) complex). The presence of interaction sites, both on the stator and the rotor, offers the possibility of switching between an open state (free rotation of the handle around the porphyrin) and a closed state (blockage of the rotation) by either establishment of hydrogen bonds between the stator and the rotor or by the simultaneous binding of Pd by both coordinating groups.     

Guest-accelerated molecular rotor

A molecular rotor was designed in which the rate of rotation is accelerated by guest complexation. The binding of an acetate guest to the urea groups lowers the barrier of the adjacent C(aryl)-N(imide) bond by 2 to 4 kcal/mol. This behavior is in contrast to most molecular rotors in which guest complexation slows rotation.     

Ferroelectricity induced by ordering of twisting motion in a molecular rotor

A novel mononuclear metal-organic compound, [Cu(Hdabco)(H(2)O)Cl(3)] (1, dabco = 1,4-diazabicyclo[2.2.2]octane) in which the Cu(II) cation adopts a slightly distorted bipyramidal geometry where the three Cl anions constitute the equatorial plane and the Hdabco cation and H(2)O molecule occupy the two axial positions, was synthesized. Its paraelectric-to-ferroelectric phase transition at 235 K (T(c)) and dynamic behaviors were characterized by single crystal X-ray diffraction analysis, thermal analysis, dielectric and ferroelectric measurements, second harmonic generation experiments, and solid-state nuclear magnetic resonance measurements. Compound 1 behaves as a molecular rotor above room temperature in which the (Hdabco) part rotates around the N···N axis as a rotator and the [Cu(H(2)O)Cl(3)] part acts as a stator. In the temperature range 235-301 K, a twisting motion of the rotator is confirmed. Below the T(c), the motions of the rotor are frozen and the molecules become ordered, corresponding to a ferroelectric phase. Origin of the ferroelectricity was ascribed to relative movements of the anions and cations from the equilibrium position, which is induced by the order-disorder transformation of the twisting motion of the molecule between the ferroelectric and paraelectric phases. Study of the deuterated analogue [Cu(Ddabco)(D(2)O)Cl(3)] (2) excludes the possibility of proton ordering as the origin of the ferroelectricity in 1.     

The fixed rotor approximation in the vibronic semi-classical treatment of atom—molecule collisions

Calculations for non-adiabatic atom—molecule collisions at low energies frequently make use of a sudden approximation vis-à-vis the molecule rotation. The present work investigates the effect on vibronic excitation and charge-transfer processes of freeing the rotation of the molecule during the collision. This is achieved in a semi-classical framework. The H⁺+O₂ collisional system is selected for this study in view of the strong anisotropy of the relevant interactions and on account of the availability of fixed rotor data for this system. Results obtained in the 1 eV/amu energy range and higher generally confirm the validity of the fixed rotor approximation. For this energy range sizeable deviations of free rotor from fixed rotor results appear in exceptional cases for impact parameters of the order of the molecule's bond distance. At lower energies (⩽0.2 eV/amu) the fixed rotor approximation becomes questionable.     

Character tables and symmetry eigenvectors for two C3v rotor molecular systems

The character tables of the Altmann groups for the double internal rotation of C_3v rotor molecules of different symmetries were determined. These symmetries were those of para-xylene, trans-1,2-dimethylcyclopropane, cis-N-methylethylidenimine, dimethylamine, and a dimethylated asymmetrical molecule. From these character tables, the symmetry eigenvectors, which block diagonalize the Hamiltonian matrix, were deduced. The symmetry eigenvectors were derived with the help of a small computer.     

Induction of molecular chirality by circularly polarized light in cyclic azobenzene with a photoswitchable benzene rotor

New phototriggered molecular machines based on cyclic azobenzene were synthesized in which a 2,5‐dimethoxy, 2,5‐dimethyl, 2,5‐difluorine or unsubstituted‐1,4‐dioxybenzene rotating unit and a photoisomerizable 3,3′‐dioxyazobenzene moiety are bridged together by fixed bismethylene spacers. Depending upon substitution on the benzene moiety and on the E/Z conformation of the azobenzene unit, these molecules suffer various degrees of restriction on the free rotation of the benzene rotor. The rotation of the substituted benzene rotor within the cyclic azobenzene cavity imparts planar chirality to the molecules. Cyclic azobenzene 1 , with methoxy groups at both the 2‐ and 5‐positions of the benzene rotor, was so conformationally restricted that free rotation of the rotor was prevented in both the E and Z isomers and the respective planar chiral enantiomers were resolved. In contrast, compound 2 , with 2,5‐dimethylbenzene as the rotor, demonstrated the property of a light‐controlled molecular brake, whereby rotation of the 2,5‐dimethylbenzene moiety is completely stopped in the E isomer (brake ON, rotation OFF), while the rotation is allowed in the Z isomer (brake OFF, rotation ON). The cyclic azobenzene 3 , with fluorine substitution on the benzene rotor, was in the brake OFF state regardless of E/Z photoisomerization of the azobenzene moiety. More interestingly, for the first time, we demonstrated the induction of molecular chirality in a simple monocyclic azobenzene by circular‐polarized light. The key characteristics of cyclic azobenzene 2 , that is, stability of the chiral structure in the E isomer, fast racemization in the Z isomer, and the circular dichroism of enantiomers of both E and Z isomers, resulted in a simple reversible enantio‐differentiating photoisomerization directly between the E enantiomers. Upon exposure to r‐ or l‐circularly polarized light at 488 nm, partial enrichment of the (S)‐ or (R)‐enantiomers of 2 was observed.     

Dynamic Behavior of Rotation Transmission Nano-System in Helium Environment: A Molecular Dynamics Study

The molecular dynamics (MD) method is used to investigate the influence of the shielding gas on the dynamic behavior of the heterogeneous rotation transmission nano-system (RTS) built on carbon nanotubes (CNTs) and boron nitride nanotube (BNNT) in a helium environment. In the heterogeneous RTS, the inner CNT acts as a rotor, the middle BNNT serves as a motor, and the outer CNT functions as a stator. The rotor will be actuated to rotate by the motor due to the interlayer van der Waals effects and the end effects. The MD simulation results show that, when the gas density is lower than a critical range, a stable signal of the rotor will arise on the output and the rotation transmission ratio (RRT) of RTS can reach 1.0, but as the gas density is higher than the critical range, the output signal of the rotor cannot be stable due to the sharp drop of the RRT caused by the large friction between helium and the RTS. The greater the motor input signal of RTS, the lower the critical working helium density range. The results also show that the system temperature and gas density are the two main factors affecting the RTS transmission behavior regardless of the size of the simulation box. Our MD results clearly indicate that in the working temperature range of the RTS from 100 K to 600 K, the higher the temperature and the lower the motor input rotation frequency, the higher the critical working helium density range allows.     

Spin—rotational relaxation study of molecular reorientation in the presence of internal extended rotational diffusion

Molecular reorientation in the presence of internal rotation is investigated and an analytical expression for the spin—rotational rate of a nucleus attached to the internal rotor is obtained in terms of the internal angular-momentum correlation time. A model of a symmetric-top molecule undergoing anisotropic rotational diffusion is extended to include a modified extended diffusion of internal rotation. The result is applied to liquid toluene and the internal angular-momentum correlation time is evaluated from the ¹³C nuclear spin—rotational relaxation rate of the methyl carbon. A comparison with the previous result on the dipole—dipole relaxation data is made and the consistency of the present theory is discussed.     

180 degree unidirectional bond rotation in a biaryl lactone artificial molecular motor prototype

A bifunctional biaryl lactone has been synthesized that should be capable of iterative unidirectional aryl-aryl bond rotation via: (1) a diastereoselective lactone ring opening, (S)-1 to (P,S)-2 or (M,S)-2; (2) a chemoselective lactonization, (P,S)-2 or (M,S)-2 to (S)-3; and (3) a chemoselective hydrolysis, (S)-3 to (S)-1. Preliminary results of a racemic sample have indicated unidirectional 180 degrees rotation with very high directional selectivity per individual artificial molecular motor molecule through the first two steps of this sequence. [reaction: see text]     

Increased speed of rotation for the smallest light-driven molecular motor

In this paper we present the smallest artificial light-driven molecular motor consisting of only 28 carbon and 24 hydrogen atoms. The concept of controlling directionality of rotary movement at the molecular level by introduction of a stereogenic center next to the central olefinic bond of a sterically overcrowded alkene does not only hold for molecular motors with six-membered rings, but is also applicable to achieve the unidirectional movement for molecular motors having five-membered rings. Although X-ray analyses show that the five-membered rings in the cis- and trans-isomer of the new molecular motor are nearly flat, the energy differences between the (pseudo-)diaxial and (pseudo-)diequatorial conformations of the methyl substituents in both isomers are still large enough to direct the rotation of one-half of the molecule with respect to the other half in a clockwise fashion. The full rotary cycle comprises four consecutive steps: two photochemical isomerizations each followed by a thermal helix inversion. Both photochemical cis-trans isomerizations proceed with a preference for the unstable diequatorial isomers over the stable diaxial isomers. The thermal barriers for helix inversion of this motor molecule have decreased dramatically compared to its six-membered ring analogue, the half-life of the fastest step being only 18 s at room temperature.     

Quantum control of a chiral molecular motor driven by femtosecond laser pulses: Mechanisms of regular and reverse rotations

Rotational mechanisms of a chiral molecular motor driven by femtosecond laser pulses were investigated on the basis of results of a quantum control simulation. A chiral molecule, (R)-2-methyl-cyclopenta-2,4-dienecarboaldehyde, was treated as a molecular motor within a one-dimensional model. It was assumed that the motor is fixed on a surface and driven in the low temperature limit. Electric fields of femtosecond laser pulses driving both regular rotation of the molecular motor with a plus angular momentum and reverse rotation with a minus one were designed by using a global control method. The mechanism of the regular rotation is similar to that obtained by a conventional pump–dump pulse method: the direction of rotation is the same as that of the initial wave packet propagation on the potential surface of the first singlet (nπ^*) excited state S₁. A new control mechanism has been proposed for the reverse rotation that cannot be driven by a simple pump–dump pulse method. In this mechanism, a coherent Stokes pulse creates a wave packet localized on the ground state potential surface in the right hand side. The wave packet has a negative angular momentum to drive reverse rotation at an early time.