Ac voltammetric and square wave voltammetric study of the self-assembled monolayers of thiol-functionalized viologen derivative

Electroactive self-assembled monolayers (SAMs) containing viologeu group are formed through the adsorption of thiol-functionalized viologen compound CH3(CH2)9V2+(CH2)8SH,where V2+ is N,N'-diaIkylbipyridinium (i.e.a viologen group),onto gold electrodes from methanol/water solution and its electrochemical behavior is investigated by Ac voltammetry and square wave voltam-metry,which have the high sensitivity against background charging.The viologen SAM formed is a sub-monolayer and the normal potentials corresponding to the two successive one-electron transfer processes of the active centers (viologen) are-360 mV and-750 mV (vs.Ag/AgCl) in 0.1mol/L phosphate buffer solutions (pH 6.96) respectively,and the standard electron transfer rate constant is 9.0s-1 The electrochemical behavior of this SAM in various solutions has been preliminarily discussed.     

烷基链长对紫精分子在Cu(100)电极表面吸附结构的影响

用循环伏安法(CV)和原位扫描隧道显微镜(STM)研究了烷基取代的紫精分子在Cu(100)电极上的氧化还原行为及其吸附结构对电极电势的依赖性. 对乙基紫精(DHV)和庚基紫精(DEV)在含有KCl电解质溶液中进行循环伏安曲线的测定, 两者呈现出不同的氧化还原行为. 从STM所得图像观察, 二价庚基紫精在Cl-c(2×2)-Cu(100)电极上呈现出二维有序的点阵组装结构,而二价乙基紫精却未出现任何的吸附结构. 降低电极电势至单电子转移反应发生时, 形成的自由基庚基紫精在电极表面呈现出稳定的条带状组装结构, 而自由基乙基紫精出现的条带组装结构比较密集且不能稳定存在. 继续降低电极电势, 庚基紫精的吸附结构会随之出现明显的变化,而乙基紫精不会有吸附结构改变的响应.     

New semifluorinated dithiols self-assembled monolayers on a copper platform

New alpha,omega-semifluorinated dithiols HS-(CH2)11-(CF2)n-(CH2)11-SH, called DTn, and corresponding dithioacetate molecules CH3COS-(CH2)11-(CF2)n-(CH2)11-SCOCH3, called DTAn ( n = 4, 6, 8), were synthesized and used to create self-assembled monolayers (SAMs) on both untreated copper surfaces and electrochemically reduced ones. The aim of this study is to assess the organization of the resulting SAMs, particularly the effect of the presence of two perhydrogenated segments surrounding the perfluorinated one, and the ability of these difunctional molecules to bind copper substrates by only one end per molecule. In each case, the organization of the SAM is rather poor and only DTA8 molecules seem to adopt an upright position on reduced copper. In addition, the layers have been investigated by cyclic voltammetry (CV) to assess their coverage. DT4 SAMs reveal a covering ratio higher than 99%.     

Synthesis and characterisation of surfactant-stabilised gold nanoparticles

Alkylthiol molecules, C₂₂H₄₅-SO₂-C₆H₄-O-C₄H₈-SH, HS-(CH₂)₂₁-OH and HS-(CH₂)₁₀-COOH, were used to stabilise gold clusters, formed in a two-phase system. The gold nanoparticles were investigated by using transmission electron microscopy, Fourier transform infra-red spectroscopy, ultraviolet-visible spectroscopy and X-ray photoelectron spectroscopy. The results show that surfactant-coated nanoparticles are indeed formed and the incorporation of a dipole or a terminal functionality into the surfactant does not hinder the self-assembling process.     

In situ wiring of single molecules into an electrical circuit via electrochemical distance tunneling spectroscopy

The electrical conductance of single n-alkanethiol and alpha,omega-alkanedithiol molecules was measured via in situ distance tunneling spectroscopy in aqueous 0.1 M KOH solution. The statistical analysis of the conductance values show that the alpha,omega-alkanedithiol molecule trapped in the STM break junction can adopt two distinct geometries that result in "lower" and "higher" conductivity values. In contrast, n-alkanethiol molecules trapped in the junction show only a single conductivity value characteristic for a particular molecule. Furthermore, the "lower" conductivity value determined for alpha,omega-alkanedithiol is virtually identical to the electrical conductivity of the n-alkanethiol containing the same number of atoms in the backbone. Moreover when the STM tip is polarized to electrochemical potential preventing a chemical reaction between the terminal -SH group and Au, only "lower" conductivity values are observed for alpha,omega-alkaneditiols.     

Long-range order of organized oligonucleotide monolayers on Au(111) electrodes

Oligonucleotides modified by a hexamethylene linker group adsorb on gold electrodes via Au-S bond formation. We have obtained novel data for adsorption of thiol-modified (HS) single-strand HS-10A and double-stranded HS-10AT oligonucleotides and for analogous thiol-free 10A (A = adenine) and 10T (T = thymine) nonspecifically adsorbed as reference molecules. Mercaptohexanol has served as a second reference molecule. The data are based on cyclic and differential pulse voltammetry, interfacial capacitance data, and in situ scanning tunneling microscopy (STM) directly in an aqueous buffer solution, with electrochemical potential control of both the sample electrode and the tip. All the data are based on single-crystal, atomically planar Au(111)-electrode surfaces. The high sensitivity of such surfaces provides accurate HS-10A and HS-10AT electrode coverages on the basis of the reductive desorption of the Au-S bond. The coverage is high and in keeping with dense monolayers of adsorbed HS-10A and HS-10AT in an upright or tilted orientation, with the oligonucleotide backbone repelled from the strongly negatively charged electrode surface. Adsorbed thiol-free 10A only gives a Au(111)-reconstruction peak, while 10T shows a subtle pattern involving pronounced voltammetric adsorption peaks indicative of both nonspecific adsorption via single thymine units and potential-dependent structural reorganization in the surface layer. In situ STM supports these findings at the molecular level. In situ STM of HS-10A discloses large, highly ordered domains at strongly negative sample potentials. Reversible domain formation and disordering could, moreover, be controlled by an electrochemical potential variation in the negative and positive directions, respectively. 10A and 10T did not form ordered adsorbate domains, substantiating that domain formation rests on adsorption of thiol-modified oligonucleotide adsorption in an upright or tilted orientation. The comprehensive, high-resolution information reported may hold prospects for single-molecule electronic conduction and molecular-scale mapping of oligonucleotide hybridization.     

Interstaple dithiol cross-linking in Au25(SR)18 nanomolecules: a combined mass spectrometric and computational study

A systematic study of cross-linking chemistry of the Au(25)(SR)(18) nanomolecule by dithiols of varying chain length, HS-(CH(2))(n)-SH where n = 2, 3, 4, 5, and 6, is presented here. Monothiolated Au(25) has six [RSAuSRAuSR] staple motifs on its surface, and MALDI mass spectrometry data of the ligand exchanged clusters show that propane (C3) and butane (C4) dithiols have ideal chain lengths for interstaple cross-linking and that up to six C3 or C4 dithiols can be facilely exchanged onto the cluster surface. Propanedithiol predominately exchanges with two monothiols at a time, making cross-linking bridges, while butanedithiol can exchange with either one or two monothiols at a time. The extent of cross-linking can be controlled by the Au(25)(SR)(18) to dithiol ratio, the reaction time of ligand exchange, or the addition of a hydrophobic tail to the dithiol. MALDI MS suggests that during ethane (C2) dithiol exchange, two ethanedithiols become connected by a disulfide bond; this result is supported by density functional theory (DFT) prediction of the optimal chain length for the intrastaple coupling. Both optical absorption spectroscopy and DFT computations show that the electronic structure of the Au(25) nanomolecule retains its main features after exchange of up to eight monothiol ligands.     

Direct adsorption and monolayer self-assembly of acetyl-protected dithiols

The alpha,omega-dithiols, with sulfur-containing groups at both ends of the molecules, can be used to bridge a metallic gap. Functional self-assembled monolayers (SAMs) of these dithiols must "stand up" on the surface and expose one thiol group for further reaction. However, both parallel and upright surface orientations and multilayer formation can occur for alpha,omega-dithiols. We find SAMs deposited directly from acetyl protected dithiols (i.e., with no de-protection step) overcome these problems. We present a systematic study of adsorption kinetics from in situ surface plasmon resonance spectroscopy, X-ray photoelectron spectroscopy, and secondary ion mass spectroscopy of alkane- and oligo(phenylene ethylnylene)-based alpha,omega-dithioacetates on gold.     

Metal-molecule-metal junctions in Langmuir-Blodgett films using a new linker: trimethylsilane

Herein trimethylsilane (TMS) is demonstrated to be an efficient binding group suitable for construction of metal-molecule-metal (M-mol-M') junctions, in which one of the metal contacts is an atomically flat gold surface and the other a scanning tunnelling microscopy (STM) tip. The molecular component of the M-mol-M' devices is an oligomeric phenylene ethynylene (OPE) derivative Me(3)Si C≡C{C(6)H(4)C≡C}(2)C(6)H(4)NH(2), featuring both Me(3)SiC≡C and NH(2) metal contacting groups. This compound can be assembled into Langmuir-Blodgett (LB) films on Au--substrates by surface binding through the amine groups. Alternatively, low coverage (sub-monolayer) films are formed by adsorption from solution. In the case of condensed monolayers top electrical contacts are formed to STM tips through the TMS end group. In low coverage films, single molecular bridges can be formed between the gold surface and a gold STM tip. The similarity in the I-V response of a one-layer LB film and the single molecule conductance experiments reveals several points of critical importance to the design of molecular components for use in the construction of M-mol-M' junctions. Firstly, the presence of neighbouring π systems does not have a significant effect on the conductance of the M-mol-M' junction. Secondly, in the STM configuration, intermolecular electron hopping does not significantly enhance the junction transport characteristics. Thirdly, the symmetric behaviour of the I-V curves obtained, despite the different metal-molecule contacts, indicates that the molecule is simply an amphiphilic electron-donating wire and not a molecular diode with strong rectifying characteristics. Finally, the conductance values obtained from the amine/TMS-contacted OPE described here are of the same order of magnitude as thiol anchored OPEs, making them attractive alternatives to the more conventionally used thiol-contacting chemistry for OPE molecular wires.     

Redox state dependence of single molecule conductivity

Spontaneous formation of stable molecular wires between a gold scanning tunneling microscopy (STM) tip and substrate is observed when the sample has a low coverage of alpha,omega-dithiol molecules and the tunneling resistance is made sufficiently small. Current-distance curves taken under these conditions exhibit characteristic current plateaux at large tip-substrate separations from which the conductivity of a single molecule can be obtained. The versatility of this technique is demonstrated using redox-active molecules under potential control, where substantial reversible conductivity changes from 0.5 to 2.8 nS were observed when the molecule was electrochemically switched from the oxidized to the reduced state.     

Structure-property relationships in redox-gated single molecule junctions--a comparison of pyrrolo-tetrathiafulvalene and viologen redox groups

We demonstrate that the electrical "switching" behavior of single molecules connected between two electrode contacts can be controlled by altering their structure and electrochemical characteristics. The electrical properties of gold|molecule|gold single molecule junctions incorporating HS(CH2)6-X-(CH2)6SH, where X = viologen (4,4'-bipyridinium) or pyrrolotetrathiafulvalene, are determined using a scanning tunneling microscopy based technique. The switching behavior, controlled through a tuneable electrochemical gate, changes from an on-off response (viologen) to an off-on-off response (pyrrolotetrathiafulvalene) on changing the central redox group. In contrast, the electrical properties of junctions incorporating redox-inactive HS(CH2)6-1,4-C6H4-(CH2)6SH do not alter significantly as a function of applied potential.     

In situ electrochemical distance tunneling spectroscopy of ds-DNA molecules

The electrical conductance of ds-DNA duplexes containing 8-14 base pairs modified at both ends with a -(CH(2))(6)-SH linker was measured in a buffered aqueous solution using electrochemically controlled distance tunneling spectroscopy. The tunneling experiment with self-complementary 5'-(GC)(n)()-3'-(CH(2))(6)-SH (n = 4-7) duplexes attached covalently to a gold STM tip and a Au(111) electrode shows a wide distribution of currents independent of the ds-DNA length. The voltage-induced horizontal orientation of ds-DNA within the junction results in decreased electrical conductance. The lower currents are also observed for ds-DNA molecules containing a single CA base mismatch.     

H~2S对硫酸溶液中铁腐蚀作用的CNDO/2研究

动电位扫描得出工业纯铁在含H~2S的H~2SO~4溶液中腐蚀的电化学行为。应用CNDO/2法确定了阴、阳极电位下H~2S,HS^-在金属Fe晶面上的稳定吸附取向与最佳吸附间距,通过对吸附物总能量、结合能、净电荷分布的计算,得出H~2S体系阴、阳极反应被加速的微观机制。阳极电位下,大量HS^-为S原子的平行吸附方式,HS^-负电荷大部分向Fe转移,促进铁的溶解。阴极电位下,少量H~2S则为H原子的平行吸附方式,Fe表面负电荷向H~2S分子中与Fe作用的H转移,促进析氢。在CNDO/2法计算的基础上,圆满地解释了实验结果。     

In-situ monitoring of redox processes of viologen at Au(hkl) single-crystal electrodes using electrochemical shell-isolated nanoparticle-enhanced Raman spectroscopy

In-situ Raman/SERS studies of molecular adsorption/reaction behaviors at well-defined electrochemical interfaces are important for understanding the fundamentals of electrochemical processes. However, it is still a great challenge to perform such studies on model single-crystal surfaces as the smooth surface cannot support surface plasmon resonance (SPR). In this work, shell-isolated nanoparticle-enhanced Raman spectroscopy was combined with an electrochemical method (EC-SHINERS) to study the adsorption and redox transformation of a resonant molecule viologen HS-8V8H at Au(hkl) single-crystal electrodes. Changes in the molecular structure with potential were identified on different single-crystal surfaces, which explained the transformation process of viologen from V^2 + state to V⁺ and then V⁰. Facet-dependent SERS enhancement was also observed, which results from the different imaginary part of the dielectric function on Au(111), Au(100) and Au(110), and is supported by the FEM simulations. Furthermore, a nonlinear resonant Raman process has been directly observed in our experiments, which is consistent with the simulation results. These findings increase our understanding of the electrochemical behavior of molecules in model systems.     

Designing highly specific biosensing surfaces using aptamer monolayers on gold

To build highly specific surfaces using aptamer affinity reagents, the effects of linker and coadsorbents were investigated for maximizing target binding and specificity for aptamer-based self-assembled monolayers (SAMs) supported on gold. An aptamer that binds the protein thrombin was utilized as a model system to compare different mixed monolayer systems toward maximizing binding and selectivity to the immobilized aptamer. Important factors used to optimize binding characteristics of thrombin to the aptamer-based monolayer films include changes in design elements of the linker and different coadsorbent thiols. Binding events measured by surface plasmon resonance (SPR) and ellipsometry showed that the binding performance of the aptamer SAMs depends principally on the linker and to a lesser extent on the coadsorbent. SAMs formed with HS-(CH2)6-OP(O)2O-(CH2CH2O)6-TTTTT-aptamer exhibited a 4-fold increase in binding capacity versus SAMs made using HS-(CH2)6-TTTTT-aptamer. Furthermore, SAMs made using HS-(CH2)6-OP(O)2O-(CH2CH2O)6-TTTTT-aptamer showed nearly complete specificity for thrombin versus bovine serum albumin (BSA, less than 2% bound), while a SAM incorporating a random DNA fragment (HS-(CH2)6-OP(O)2O-(CH2CH2O)6-TTTTT-RANDOM) showed little binding of thrombin. Irrespective of the aptamer-linker system, use of HS-(CH2)11(OCH2CH2)3OH, referred to as EG(3), as a coadsorbent enhanced binding of thrombin by approximately 2.5-fold compared to that of HS-(CH2)6-OH (mercaptohexanol, MCH).     

In situ scanning tunneling microscopy of 1,6-hexanedithiol, 1,9-nonanedithiol, 1,2-benzenedithiol, and 1,3-benzenedithiol adsorbed on pt(111) electrodes

Cyclic voltammetry (CV) and in situ scanning tunneling microscopy (STM) were used to examine four dithiol molecules, including 1,6-hexanedithiol, 1,9-nonanedithiol, 1,2-benzenedithiol, and 1,3-benzenedithiol, adsorbed on well-ordered Pt(111) electrodes in 0.1 M HClO(4). The open-circuit potential (OCP) of Pt(111) electrodes decreased substantially from 0.95 to 0.3 V (versus reversible hydrogen electrode) upon the adsorption of dithol molecules, which indicates that these adsorbates injected electrons into the Pt electrode. For all dithiol molecules, ordered adlattices of p(2 x 2) and (square root 3 x square root 3)R30 degrees were formed when the dosing concentration was lower than 150 microM and the potential of Pt(111) was more negative than 0.5 V. Raising the potential of Pt(111) from 0.1 to 0.4 V or more positive values could transform p(2 x 2) to (square root 3 x square root 3)R30 degrees before it turned disarray. The insensitivity of the structure of dithiol adlayers with their chemical structures was explained by upright molecular orientation with the formation of one Pt-S bond per dithiol molecule. This molecular orientation was independent of the coverage of dithiol molecules, as nucleation seeds produced at the beginning of adsorption were also constructed with p(2 x 2). The triangular-shaped STM molecular resolution suggested 3-fold binding of sulfur headgroup on Pt(111). All dithiols were adsorbed so strongly on Pt(111) electrodes that switching the potential negatively to the onset of hydrogen evolution in 0.1 M HClO(4) or water reduction in 1 M KOH could not displace dithiol admolecules.     

Preparation, characterization, and electrochemical properties of a new series of hybrid dendrimers containing a viologen core and Frechet and Newkome dendrons

Five new 4,4'-bipyridinium (viologen) core dendrimers containing a Frechet (Fn, n = 1-3, first to third generation) and a Newkome (Nn, n = 1-3) dendron linked to each of the termini of the viologen residue were prepared and characterized. These macromolecules (FnNn) were prepared according to synthetic methodology already developed by our group. The electrochemical behavior of these dendrimers is characterized by the stepwise reduction of the viologen nucleus (V(2+)/V(+) and V(+)/V). The recorded half-wave potentials are affected by dendron growth in the three surveyed solvent media (dichloromethane, tetrahydrofuran, and acetonitrile). The size of the Newkome dendron has a more pronounced effect on the half-wave potentials than the size of the Frechet dendron. However, increasing the size of the Frechet dendron diminishes the magnitude of the cathodic potential shifts resulting from Newkome dendron growth. The largest dendrimers investigated (F1N3 and F2N3) exhibit quasi-reversible voltammetric behavior. The diffusion coefficients of these molecules were also determined using pulse gradient stimulated echo NMR techniques.     

Formation of ordered self-assembled monolayers by adsorption of octylthiocyanates on Au(111)

Self-assembled monolayers (SAMs) were formed by the spontaneous adsorption of octythiocyanate (OTC) on Au(111) using both solution and ambient-pressure vapor deposition methods at room temperature and 50 degrees C. The surface structures and adsorption characteristics of the OTC SAMs on Au(111) were characterized by scanning tunneling microscopy (STM) and X-ray photoelectron spectroscopy (XPS). The STM observation showed that OTC SAMs formed in solution at room temperature have unique surface structures including the formation of ordered and disordered domains, vacancy islands, and structural defects. Moreover, we revealed for the first time that the adsorption of OTC on Au(111) in solution at 50 degrees C led to the formation of SAMs containing small ordered domains, whereas the SAMs formed by vapor deposition at 50 degrees C had long-range ordered domains, which can be described as (radical3 x 2 radical19)R5 degrees structures. XPS measurements of the peaks in the S 2p and N 1s regions for the OTC SAMs showed that vapor deposition is the more effective method as compared to solution deposition for obtaining high-quality SAMs by adsorption of OTC on gold. The results obtained will be very useful in understanding the SAM formation of organic thiocyanates on gold surfaces.     

Phase transition behavior of two-component viologen adsorption layers on a HOPG electrode surface

Phase transition behavior of two-component viologen adsorption layers at a HOPG electrode was described using the results of voltammetric measurements. In the coexistence of heptyl viologen (HV) and its bis-carboxylated derivative in the solution phase, a well-mixed condensed monolayer of the radical cations was formed at any molar fraction. In sharp contrast, the binary system of HV and butyl viologen (BV) exhibited phase separation in the molar fraction range where BV is saturated in the predominantly formed condensed phase of HV. It was, however, found that this separation, being opposed to the prediction based on the adsorption free energy, occurs only when the time period enough for full condensation of HV is not given. The significant features of phase transition of two-component viologen adsorption layers on a HOPG electrode surface were highlighted in comparison with the formation and reductive desorption of the self-assembled monolayers of alkanethiols.     

Thionicotinamide SAM on Gold: Adsorption Studies and Electroactivity

STM and impedance results of the self‐assembled monolayer (SAM) formed with thionicotinamide (TNA) on gold indicate the presence of defects that increase with the immersion time of the electrode in the TNA solution affecting the SAM electroactivity toward the electron transfer reaction of the cytochrome c metalloprotein and [Fe(CN)₆]^4? and [Ru(NH₃)₆]³⁺ complexes. It was observed that this electroactivity was also affected by the pH of the electrolyte solution. SERS and STM data indicate sulfur coordination to the surface with contribution of the NH₂ group. From the dependence of the TNA surface coverage on the temperature and concentration in solution, thermodynamic parameters of adsorption were determined.