Laser desorption mass spectrometry of squaric acid and its salts

The laser desorption mass spectrometry of the oxocarbon squaric acid (3,4-dihydroxy-3-cyclobutene-1,2-dione) and its salts of the form A₂C₄O₄ (A = cation) is described. Both positive and negative ion spectra were obtained. The positive ion spectrum of the acid is characterized by an ion corresponding to loss of CO from [M + H]⁺. The negative ion spectrum shows an intense [M ? H]^? peak in addition to a dimer species. The alkali salt spectra contain [M + A]⁺ in the positive mode and [M ? A]^? and an intense [C₄HO₄]^? in the negative mode. The smaller alkali salts also have an [M + H]⁺ adduct ion. Unlike the alkali squarates, the ammonium salt shows ions corresponding to losses of neutrals from the molecular adduct in the positive ion spectrum and a dimer species in the negative ion spectrum. Molecular weight information was obtained in all cases. A (bis) dicyanomethylene derivative of potassium squarate was also studied. Some field desorption mass spectrometry results are presented for comparison.     

Characterization of internal salts by laser mass spectrometry

An intermolecular alkyl transfer reaction (ATR) leading to ion-pair formation has been observed for internal salts by using laser mass spectrometry (l.m.s.). Positive- and negative-ion spectra both show evidence for alkyl transfer. Both the LAMMA-500 (transmission) and LAMMA-1000 (reflection) laser mass spectrometers were used. The positive-ion laser mass spectra obtained by these two instruments show some significant differences; no significant differences were observed in the negative-ion spectra. Results obtained for quaternary ammoniohexanoates as a function of laser power indicate that the extent of ATR is greater at high laser power. Addition of a small amount of p-toluenesulfonic acid to the ammoniohexanoates reduces fragmentation and enhances the intensity of the quasimolecular ion (M + H)⁺ relative to ATR. Results from deuterated sultaines were used to confirm intermolecular alkyl transfer and to elucidate some fragmentation processes. Field-desorption (f.d.) mass spectra of internal salts show similarities and differences from l.m.s.; not all internal salts showed the alkyl transfer reaction in f.d. Cluster ion formation was observed in f.d.m.s. but not in l.m.s.     

Measuring salty samples without adducts with MALDI MS

Matrix-assisted laser desorption/ionization (MALDI) mass spectrometry (MS) has been used for the discovery of hundreds of novel cell to cell signaling peptides. Beyond its advantages of sensitivity and minimal sample preparation requirements, MALDI MS is attractive for biological analyses as high quality mass spectra may be obtained directly from specific locations within prepared tissue sections. However, due to the large quantity of salts present in physiological tissues, these mass spectra often contain many adducts of cationic salts such as sodium and potassium, in addition to the molecular ion [M + H]⁺. To reduce the presence of cation adducts in MALDI mass spectra obtained directly from tissues, we present a methodology that uses a slow condensation procedure to enable the formation of distinct regions of matrix/analyte crystals and cation (salt) crystals. Secondary ion mass spectrometric imaging suggests that the salts and MALDI matrix undergo a mutually exclusive crystallization process that results in the separation of the salts and matrix in the sample.     

The modern mass spectrometer—a complete chemical laboratory

Using nitrobenzene as an example, various ways in which a contemporary mass spectrometer can be utilized to yield a wealth of information about the compound studied are reviewed. Applying a variety of different techniques and procedures, in addition to the conventional low resolution mass spectrum, the following nitrobenzene spectra have been obtained: collision induced dissociation mass spectrum, mass analysed ion kinetic energy spectra, collision induced dissociation mass analysed ion kinetic energy spectra, spectra obtained at constant B/E, spectra obtained at constant B²/E, high voltage scans of metastable ion fragmentation processes, consecutive fragmentations in different field free regions, charge exchange mass spectra, charge stripping mass spectra, doubly charged ion mass spectra, chemical ionization mass spectra, negative ion mass spectra, negative ion mass analysed ion kinetic energy spectra, negative ion mass analysed ion kinetic energy collision induced dissociation spectra, charge inversion spectra, etc. The complementary types of information available from the above studies are discussed to show the unique versatility of mass spectrometry as a technique for the examination of organic compounds.     

Animal urine as painting materials in African rock art revealed by cluster ToF‐SIMS mass spectrometry imaging

The rock art site at the village of Songo in Mali is a very important Dogon ritual place where, since the end of the nineteenth century until today, takes place the ceremony of circumcision. During these ceremonies, paintings are performed on the walls of the shelter with mainly three colors: red, black and white. Ethnological literature mentions the use of animal urine of different species such as birds, lizards or snakes as a white pigment. Urine of these animals is mainly composed of uric acid or urate salts. In this article, time‐of‐flight secondary ion mass spectrometry (ToF‐SIMS) is used to compare uric acid, snake urine and a sample of a white pigment of a Dogon painting coming from the rock art site of Songo. ToF‐SIMS measurements in both positive and negative ion modes on reference compounds and snake urine proved useful for the study of uric acid and urate salts. This method enables to identify unambiguously these compounds owing to the detection in negative ion mode of the ion corresponding to the deprotonated molecule ([M ? H]^? at m/z 167.01) and its fragment ions. Moreover, the mass spectra obtained in positive ion mode permit to differentiate uric acid and urate salts on the basis of specific ions. Applying this method to the Dogon white pigments sample, we show that the sample is entirely composed of uric acid. This proves for the first time, that animal urine was used as a pigment by the Dogon. The presence of uric acid instead of urate salts as normally expected in animal urine could be explained by the preparation of the pigment for its application on the stone. Copyright © 2010 John Wiley & Sons, Ltd.     

Effects of substrate surfaces in matrix‐assisted laser desorption/ionization mass spectrometry

For matrix‐assisted laser desorption/ionization (MALDI) mass spectra, undesirable ion contamination can occur due to the direct laser excitation of substrate materials (i.e., laser desorption/ionization (LDI)) if the samples do not completely cover the substrate surfaces. In this study, comparison is made of LDI processes on substrates of indium and silver, which easily emit their own ions upon laser irradiation, and conventional materials, stainless steel and gold. A simultaneous decrease of ion intensities with the number of laser pulses is observed as a common feature. By the application of an indium substrate to the MALDI mass spectrometry of alkali salts and alkylammonium salts mixed with matrices, 2,5‐dihydroxybenzoic acid (DHB) or N‐(4‐methoxybenzylidene)‐4‐butylaniline (MBBA), the mixing of LDI processes can be detected by the presence of indium ions in the mass spectra. This method has also been found to be useful for investigating the intrinsic properties of the MALDI matrices: DHB samples show an increase in the abundance of fragment ions of matrix molecules and cesium ions with the number of laser pulses irradiating the same sample spot; MBBA samples reveal a decrease in the level of background noise with an increase in the thickness of the sample layer. Copyright © 2009 John Wiley & Sons, Ltd.     

Cationization of organic molecules under pulsed laser induced ion generation

Mass spectra of various involatile organic compounds, obtained by surface analysis with a laser microprobe mass analyser are reported. Metal-cationized quasimolecular ions of adenine, adenosine, 5-adenylic acid and sucrose supported on metal foils were observed. Metal attachment can also be detected from mixtures of metal salts and the organic compounds. Silver-cationized sugar molecules and atomic silver ions solvated by (H₂O)_x and (NH₃)_x (x = 1,2) have been found. The mass spectra are compared with those obtained by secondary ion mass spectrometry and similar techniques, discussing the processes of ion generation involved.     

Methyl transfer in field desorption mass spectrometry of ammonioalkanecarboxylate hydrochloride salts

Intramolecular methyl transfer has been observed previously in pyrolysis electron impact mass spectra of complex ammonioalkanecarboxylates. We present here field desorption mass spectra results of more simple N,N,N-trimethylammoniocarboxylate hydrochloride salts and their N,N,N-perdeuterotrimethylammonium analogs in which we observe methyl transfer. We demonstrate that mechanisms for this and other fragmentation and rearrangement processes are dependent on anode heating current. Addition of the protonating agent p-toluenesulfonic acid suppresses most ions except the protonated molecular ion.     

Secondary ion mass spectrometry of sugar nucleotides

Secondary ion mass spectra of fifteen sugar nucleotide sodium salts were investigated. In the negative-ion mode. deprotonated free acid molecules, desodiated sodium salts and some structurally significant fragment ion swere obtained. The linked scan at constant B/E gave information on the characteristics of the sugar, nucleosides and base moieties in the sugar nucleotides.     

Mass spectral studies of alkylbenzenesulphonic acids through their S-benzylisothiouronium salts

The mass spectra of alkylbenzenesulphonic acids in the form of their S-benzylisothiouronium salts have been studied. These S-benzylisothiouronium salts dissociated into two parent reactant ions: (i) alkylbenzenesulphonic acid and (ii) S-benzylisothiourea. The characteristic fragmentation patterns of alkylbenzenesulphonic acids (0-5 substituted alkyls) were studied and compared with those of the parent hydrocarbons. The intensity of the molecular ion peak decreased with the increase in the molecular weight of the sulphonic acids. Desulphonation as well as loss of the alkyl group was observed in all the spectra. Migration of the alkyl group from S to O, followed by degradation, was also observed in all the spectra studied.     

Method development for the analysis of resinous materials with MALDI‐FT‐ICR‐MS: novel internal standards and a new matrix material for negative ion mode

Matrix‐assisted laser desorption/ionization (MALDI) is a mass spectrometry (MS) ionization technique suitable for a wide variety of sample types including highly complex ones such as natural resinous materials. Coupled with Fourier transform ion cyclotron resonance (FT‐ICR) mass analyser, which provides mass spectra with high resolution and accuracy, the method gives a wealth of information about the composition of the sample. One of the key aspects in MALDI‐MS is the right choice of matrix compound. We have previously demonstrated that 2,5‐dihydroxybenzoic acid is suitable for the positive ion mode analysis of resinous samples. However, 2,5‐dihydroxybenzoic acid was found to be unsuitable for the analysis of these samples in the negative ion mode. The second problem addressed was the limited choice of calibration standards offering a flexible selection of m/z values under m/z 1000. This study presents a modified MALDI‐FT‐ICR‐MS method for the analysis of resinous materials, which incorporates a novel matrix compound, 2‐aminoacridine for the negative ion mode analysis and extends the selection of internal standards with m/z <1000 for both positive (15 different phosphazenium cations) and negative (anions of four fluorine‐rich sulpho‐compounds) ion mode. The novel internal calibration compounds and matrix material were tested for the analysis of various natural resins and real‐life varnish samples taken from cultural heritage objects. Copyright © 2017 John Wiley & Sons, Ltd.     

Ion Mobility Mass Spectrometry for Extracting Spectra <Emphasis Type="Italic">of N</Emphasis>-Glycans Directly from Incubation Mixtures Following Glycan Release: Application to Glycans from Engineered Glycoforms of Intact,Folded HIV gp120

The analysis of glycosylation from native biological sources is often frustrated by the low abundances of available material. Here, ion mobility combined with electrospray ionization mass spectrometry have been used to extract the spectra of N-glycans released with PNGase F from a serial titration of recombinantly expressed envelope glycoprotein, gp120, from the human immunodeficiency virus (HIV). Analysis was also performed on gp120 expressed in the α-mannosidase inhibitor, and in a matched mammalian cell line deficient in GlcNAc transferase I. Without ion mobility separation, ESI spectra frequently contained no observable ions from the glycans whereas ions from other compounds such as detergents and residual buffer salts were abundant. After ion mobility separation on a Waters T-wave ion mobility mass spectrometer, the N-glycans fell into a unique region of the ion mobility/m/z plot allowing their profiles to be extracted with good signal:noise ratios. This method allowed N-glycan profiles to be extracted from crude incubation mixtures with no clean-up even in the presence of surfactants such as NP40. Furthermore, this technique allowed clear profiles to be obtained from sub-microgram amounts of glycoprotein. Glycan profiles were similar to those generated by MALDI-TOF MS although they were more susceptible to double charging and fragmentation. Structural analysis could be accomplished by MS/MS experiments in either positive or negative ion mode but negative ion mode gave the most informative spectra and provided a reliable approach to the analysis of glycans from small amounts of glycoprotein.     

Analysis of three different types of fullerene derivatives by laser desorption/ionization time‐of‐flight mass spectrometry with new matrices

Three different types of fullerene derivatives, namely methano[60]fullerene dicarboxylate esters, [60]fulleropyrrolidines, and imino[60]fullerenes, were analyzed by matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry using trans‐4‐tert‐butyl‐4′‐nitrostilbene (TBNS), 1,8,9‐anthracenetriol (dithranol), 6‐aza‐2‐thiothymine (ATT), 2,5‐dihydroxybenzoic acid (DHB) and carbazole as matrices. Unit mass resolution (sufficient to clearly resolve isotopic peaks), high signal‐to‐noise ratio, and clean mass spectra for all analytes were acquired by the optimization of experimental parameters and choice of optimal solvent for the matrix and molar matrix‐to‐analyte ratio. The new matrix, TBNS, gave the best results in the positive‐ion mode, as it can provide higher yields of analyte molecular ions at a lower laser threshold than the other four matrices, together with a very low degree of unwanted fragmentations. In the negative‐ion mode dithranol was better than TBNS, and the other three matrices gave relatively poor mass spectra for these fullerene derivatives. Copyright © 2005 John Wiley & Sons, Ltd.     

甾体磷酰胺类缀合物在电喷雾质谱中的裂解特征

Novel steroidal phosphoramidate conjugates of 3'-azido-2',3'-dideoxythymidine(AZT)and amino acid esterswere synthesized and determined by positive and negative ion electrospray ionization mass spectrometry.The MSfragmentation behaviors of the steroidal phosphoramidate conjugates have been investigated in conjunction withtandem mass spectrometry of ESI-MS/MS.There were three characteristic fragment ions in the positive ion ESImass spectra,which were the Na adduct ions with loss of steroidal moiety,amino acid ester moiety from pseudomolecular ion(M Na)~ ,and the phosphoamino acid methyl ester Na adduct ion by α-cleavage of the phosphora-midate respectively.The main fragment ions in negative ion ESI mass spectra were the ion(M-HN_3)~-,the ion(M-AZT-H)~-,and the ion(M-steroidal moiety-H)~- besides the pseudo molecular ion(M-H)~-.Thefragmentation patterns did not depend on the attached amino acid ester moiety.     

Complexation Between (O‐Methyl)6‐2,6‐Helic[6]arene and Tertiary Ammonium Salts: Acid/Base‐ or Chloride‐Ion‐Responsive Host–Guest Systems and Synthesis of [2]Rotaxane

Complexation between (O ‐methyl)₆‐2,6‐helic[6]arene and a series of tertiary ammonium salts was described. It was found that the macrocycle could form stable complexes with the tested aromatic and aliphatic tertiary ammonium salts, which were evidenced by ¹H NMR spectra, ESI mass spectra, and DFT calculations. In particular, the binding and release process of the guests in the complexes could be efficiently controlled by acid/base or chloride ions, which represents the first acid/base‐ and chloride‐ion‐responsive host–guest systems based on macrocyclic arenes and protonated tertiary ammonium salts. Moreover, the first 2,6‐helic[6]arene‐based [2]rotaxane was also synthesized from the condensation between the host–guest complex and isocyanate.     

Fast atom bombardment mass spectrometry of salts of substituted methylene bisphosphonic acids and other analogues of pyrophosphoric acid

Fast atom bombardment mass spectra have been obtained of salts of analogues of inorganic pyrophosphoric acid, e.g. substituted methylene bisphonates, and positive ion fast atom bombardment mass spectrometry (FABMS) has proved to be more successful than negative ion FABMS for the analysis of these salts. Owing to the low molecular weight of these analogues, FAMBS of the free acids and the sodium salts does not always give results which are easy to interpret as interference by peaks from the matrix can occur. However, the potassium salts in a 60% glycerol matrix, when bombarded by argon atoms, give good FAB spectra which are relatively free of interfering peaks.     

Studies in cluster ion formation. Part I. Fast atom bombardment mass spectrometry of tetraalkylammonium halides: Factors influencing cluster ion size and stability

Positive and negative ion fast atom bombardment mass spectra of tetraalkylammonium halide salts (NR₄X, where X = Cl, Br, I and NR₄ = NMe₄, NEt₄) have been studied and intense cluster ion formation has been observed. The cluster ion intensity distributions were found to show enhancements at certain cluster numbers (n). The negative cluster ions of NMe₄X salts showed anomalous ion intensity regions, which differed from both the positive cluster ions of all NR₄X salts and also the corresponding negative clusters of NEt₄X salts. The influence of anion and cation size on cluster ion formation and abundances has been studied and it has been established that smaller anion and cation size favours the formation of larger cluster ions. The possible structures of the cluster ions exhibiting relative increased stabilities are discussed.     

Reference standards for negative ion mass spectrometry

The negative ion mass spectra of phosphonitrile chlorides (PNCl₂)_n (n≥3) are studied. Since this series of compounds give very intense negative [M]^? and [M? Cl]^? ions, they can be used as good reference standards for negative ion mass spectrometry.     

Laser desorption mass spectrometry of thermally labile compounds using a continuous wave CO2 laser

A continuous wave CO₂ laser has been used for the production of gaseous ions from organic sample layers. The long desorption times of a few seconds enabled a quadrupole mass spectrometer to be used for recording the mass spectra by signal accumulation. The laser desorption spectra of several thermally labile compounds are reported and discussed. The level of fragmentation is rather low. Molecular and fragment ions are formed almost exclusively by alkali ion attachment, even with acids. A particularly long desorption time of more than one minute has been observed with quarternary ammonium salts.     

Cluster ion formation in laser mass spectrometry of substituted pyridines

Emission of cluster ions occurs during laser irradiation of substituted pyridines even at threshold laser power densities. The clusters generated include dimers and trimers, and appear in both positive-ion and negative-ion laser mass spectra. Fragments of cluster ions are observed and can be rationlized as losses of neutral molecules from (nM ± H)^±. Dissociation of clusters occurs primarily from substituents on the pyridine ring. Laser mass spectrometry of pyridoxine hydrochloride and pyridoxamine-dihydrochloride resulted in the emission of clusters analogous to those observed for nicotinic acid. In contrast to these results, secondary-ion and field-desorption mass spectra of salts contain the ions C_nA_n?1⁺ and C_nA_n+1^?, that were not detected in the laser mass spectra.