Metastable ion and induced stable ion fragmentation of isomeric 5-methyl-3-tolyl-1,2,4-oxadiazoles

The electron ionization fragmentation patterns of 5-methyl-3-(o-, m- and p-tolyl)-1,2,4-oxadiazoles (1a—c) have been examined by metastable ion and high resolution mass spectrometry. The o-tolyl isomer loses CO and C₂H₂O from the metastable molecular ion whereas the m- and p-tolyl isomers lose only CH₃CN thus indicating a strong ortho effect in directing the fragmentation in 1a. Slight differences between o-, m- and p-tolyl isomers in the collisional activation fragmentation of stable [C₇H₆N]⁺ ions suggest that structural differences exist even after a series of extensive rearrangements of the molecular ions. Metastable ion kinetic energy (MIKE) and collisional activation (CA) spectra were very helpful in providing valuable information about many fragments.     

Mass spectrometry of heterocyclic compounds VIII–electron-impact-induced fragmentation of 1,2-diphenyl-pyrazolidine-3,5-dione and some 4-substituted derivatives

The mass spectra of 1,2-diphenyl-pyrazolidine-3,5-dione and twenty-one 4-substituted derivatives are reported. Their fragmentation patterns have been studied by deuterium labelling, exact mass measurements, metastable studies by the defocusing technique and low energy spectra. Hydrogen rearrangements from the 4-position of the heterocycle and/or from the ß-position of the 4-substituent groups, lead to the main primary fragment ions [C₁₂H₁₁N₂]⁺ (m/e 183) as shown by the metastables. The 4,4-d₂ derivative shows an appreciable isotope effect even for molecular ions decomposing in the ion source. By comparison with the metastable abundances of competitive reactions, the molecular ions (m/e 252) of the 4-unsubstituted compound appear to be structurally different from the corresponding m/e 252 fragment ions formed from 4-derivatives by the loss of 4-substituent with H rearrangement. If only vinylic or aromatic hydrogen atoms are present, primary cleavage of the heterocyclic ring occurs with loss of OH·, C₃O₂ and C₃HO₂. Important rearrangements leading to elimination of C₆H₆N and C₆H₇N are typical for unsaturated substituents on position four having allylic hydrogen atoms. Fragment ions, identical to molecular ions of some compounds discussed here, are obtained by electron-impact and/or thermal decompostion of some complex compounds containing more than one 1,2-diphenyl-pyrazolidine-3,5-dione system. The [C₆H₅N₂]⁺ (m/e 105) and [C₆H₅]⁺ (m/e 77) ions are common fragments of all the title compounds. Any hydrogen scrambling reactions between phenyl and heterocycle or 4-substituent groups can be excluded.     

The heats of formation of some protonated olefinic carbonyl compounds: [C5H9O]+ and [C4H7O2]+ ions

The proton transfer equilibrium reactions involving 3-penten-2-one, 3-methyl-3-buten-2-one, crotonic acid and methacrylic acid were carried out in an ion cyclotron resonance (ICR) spectrometer. The semiempirical method MNDO, used to estimate the heats of formation for 14 protonated [C₅H₉O]⁺ and [C₄H₇O₂]⁺ ions and the energetic aspect of the fragmentations of metastable [C₆H₁₂O]^+. and [C₆H₁₂O₂]^+. ions, leads to the conclusion that the ions corresponding to protonation at the carbonyl oxygen are the most stable. Thus the experimentally determined heats of formation of protonated olefinic carbonyl compounds can be attributed to the following structures: [CH₃COHCHCHCH₃]⁺ (δH_f = 490 KJ mol^?1), [CH₃COHC(CH₃)CH₂]⁺ (δH_f = 502 KJ mol^?1), [HOCOHCHCHCH₃]⁺ (δH_f = 330 KJ mol^?1) and [HOCOHC(CH₃)CH₂]⁺ (δH_f = 336 KJ mol^?1).     

Chemical ionization mass spectra of selected C3H6O compounds

The chemical ionization mass spectra of five isomers of C₃H₆O (acetone, propionaldehyde, oxetane, propylene oxide and allyl alcohol) have been determined using a variety of reagent gases (H₂, D₂, N₂/H₂, CO₂/H₂ and CO/H₂). The [C₃H₇O]⁺ ions produced by protonation of these isomers undergo very similar reactions to those reported for analogous [C₃H₇O]⁺ metastable ions; however, decomposing ions generated by chemical ionization appear to have somewhat higher internal energies. The results of ²H labelling studies (D₂ reagent gas or labelled analogues of C₃H₆O) indicate that protonation occurs mainly on oxygen and are consistent with previous investigations of metastable oxonium ions. The protonated acetone ion is particularly stable, in agreement with the higher activation energies for fragmentation of this isomer than for other [C₃H₇O]⁺ structures. As the calculated heat of protonation of C₃H₆O is reduced by changing the reagent gas, so the extent to which fragmentation occurs decreases. This is discussed in the context of competition between fragmentation and collisional stabilization of the excited [C₃H₇O]⁺* ion. It is concluded that on average a large fraction (approaching 1) of the exothermicity of the protonation reaction resides in the [C₃H₇O]⁺* ions produced initially.     

Rearrangements and fragmentations of metastable [C13H9S]+, [C14H11]+, [C13H11]+ and [C8H7S]+ ions

[C₁₃H₉S]⁺, [C₁₄H₁₁]⁺, [C₁₃H₁₁]⁺ and [C₈H₇S]⁺ ions with unknown structures were generated from two [C₁₄H₁₂S]^+·precursor ions by fragmentation reactions that must be preceded by extensive rearrangements. Ions with the same compositions, each with several initial structures, were prepared by simple bond-breaking reactions. Metastable characteristics were compared for each of the four types of ions. It was found than in all cases fast isomerization reactions occur prior to fragmentation, so that no information about the unknown ion structures could be obtained by comparison of the observed fragmentations of metastable ions.     

Four-centred rearrangements in the mass spectra of aliphatic ethers

The [CH₃O?CHCH₃]⁺ ions observed in the mass spectra of ethers of formula CH₃OCH (CH₃)R(R = H or alkyl) undergo two rearrangement fragmentation reactions to form [C₂H₅]⁺ and [CH₂OH]⁺. The scope of the rearrangements has been investigated and it is shown that enlargement of the alkyl group on either side of the ether linkage leads to alternative fragmentation routes. From a study of metastable intensities it is concluded that the fragmentations probably occur directly from the [CH₃O?CHCH₃]⁺ structure through four centred rearrangements rather than through the intermediacy of the [C₂H₅O?CH₂]⁺ ion.     

C-C and C-H bond activation in the fragmentation of the [M + Ni]+ adducts of aliphatic amino acids

The major metal-containing species formed upon fast atom bombardment of amino acid/Ni⁺² mixtures is the [M + Ni]⁺ adduct, involving reduction of the Ni⁺² to the +1 oxidation state. By contrast, electrospray ionization of amino acid/Ni⁺² mixtures produces predominantly [Ni(M ? H)M]⁺; this species, on collisional activation, produces predominantly [M + Ni]⁺ by elimination of [M - H], presumably a carboxylate radical. The unimolecular fragmentation reactions occurring on the metastable ion time scale for the [M + Ni]⁺ adducts of a variety of α-amino acids have been recorded. The adducts with phenylalanine, α-aminoisobutyric acid and α-aminobutyric acid fragment by elimination of H₂O, H₂O + CO and, to a minor extent, by elimination of CO₂. These reactions are similar to those observed for the [M + Cu]⁺ adducts of α-amino acids. A reaction distinctive for the [M + Ni]⁺ adducts involves formation of the immonium ion RCH=NH ₂ ⁺ . By contrast, the [M + Ni]⁺ adducts with leucine, isoleucine, and norleucine show extensive metastable ion fragmentation by elimination of H₂, CH₄, C₂H₄, C₃H₆, and C₄H₈, with the relative importance of the different fragmentation channels depending on the configuration of the C₄H₉ side chain. These results are interpreted in terms of C-C and C-H bond activation of the C₄H₉ side chain by the Ni⁺. The adducts with valine and norvaline fragment in a fashion similar to the adduct with phenylalanine, except that minor elimination of C₃H₆ is observed.     

An energy-resolved study of the fragmentation of ionized 1-Penten-3-ol

A detailed energy-resolved study of the fragmentation of CH₂?CHCH(OH)CD₂CD₃ (1-d₅) has been carried out using metastable ion studies and charge exchange techniques, combined with collision-induced dissociation studies to establish the structures of fragment ions. At low internal energies (metastable ions) the molecular ion of 1-d₅ rearranges to the 3-pentanone structure and fragments by loss of C₂H₅ or C₂D₅ leading to the acyl structure, [CH₃CH₂C?O]⁺ or [CD₃CD₂C?O]⁺, for the fragment ion. However, with increasing internal energy of the molecular ion this rearrangement process decreases rapidly in importance and loss of C₂D₅ by direct cleavage, leading to [CH₂?CHCH?OH]⁺, becomes the dominant fragmentation reaction. As a result the [C₃H₅O]⁺ ion seen in the electron impact mass spectrum of 1-penten-3-ol has predominantly the protonated acrolein structure.     

Pathways for Water Loss from Doubly Protonated Peptides Containing Serine or Threonine

The doubly-protonated peptides Ala-Ala-Xaa-Ala-Ala-Ala-Arg show extensive loss of H₂O when Xaa = Ser or Thr. Using quasi-MS³ techniques the fragmentation reactions of the [M + 2H – H₂O]⁺² ions have been studied in detail. For both Ser and Thr, the [M + 2H – H₂O]⁺² ions show three primary fragmentation reactions, elimination of CH₃CH = NH, elimination of one Ala residue, and elimination of two Ala residues, in all cases forming doubly-charged products. From a study of the further fragmentation of these products, it is concluded that elimination of two Ala residues results in formation of a three-membered aziridine ring by interaction with the adjacent amide function as H₂O is lost. The elimination of one Ala residue results in formation of a five-membered oxazoline ring through interaction with the N-terminal adjacent carbonyl function as H₂O is lost. The elimination of CH₃CH = NH appears to involve formation of an eight-membered ring by interaction with the remote N-terminal carbonyl function as H₂O is lost. However, this initial structure undergoes rearrangement through interaction with the adjacent C-terminal carbonyl function prior to further fragmentation. The [MH – H₂O]⁺ ion of Ala-Ala-Ser-Ala-Ala-Ala also shows elimination of CH₃CH = NH, one Ala residue and two Ala residues.     

Mechanism of CO loss for protonated 1-indanone and isomeric [C9H9O]+ ions

In order to establish the mechanism of CO loss occurring during metastable decomposition of protonated 1-indanone, fragmentations of monocyclic [C₉H₉O]⁺ isomers have been studied. These ions of known structure were prepared by CI protonation and fragmentation of the corresponding acids chlorides. It is demonstrated that the wide component of the [MH? CO]⁺ metastable peak induced by protonated 1-indanone fragmentation is the result of fragmentation of the [C₆H₅CH₂CH₂CO]⁺ isomer ion.     

Fragmentation of 2‐aroylbenzofuran derivatives by electrospray ionization tandem mass spectrometry

We investigated the gas‐phase fragmentation reactions of a series of 2‐aroylbenzofuran derivatives by electrospray ionization tandem mass spectrometry (ESI‐MS/MS). The most intense fragment ions were the acylium ions m/z 105 and [M+H–C₆H₆]⁺, which originated directly from the precursor ion as a result of 2 competitive hydrogen rearrangements. Eliminations of CO and CO₂ from [M+H–C₆H₆]⁺ were also common fragmentation processes to all the analyzed compounds. In addition, eliminations of the radicals •Br and •Cl were diagnostic for halogen atoms at aromatic ring A, whereas eliminations of •CH₃ and CH₂O were useful to identify the methoxyl group attached to this same ring. We used thermochemical data, obtained at the B3LYP/6‐31+G(d) level of theory, to rationalize the fragmentation pathways and to elucidate the formation of E , which involved simultaneous elimination of 2 CO molecules from B .     

Stereochemical applications of mass spectrometry 4. Energy-resolved study of the fragmentation of esters of maleic and fumaric acids

The fragmentation of the dimethyl and diethyl esters of maleic and fumaric acids have been studied as a function of the internal energy of the molecular ions using charge exchange techniques and metastable ion studies in combination with isotopic labelling. The dimethyl ester molecular ions show distinctive behaviours at both low and high internal energies, indicating that interconversion of the molecular ions does not occur. The fumarate molecular ion fragments by elimination of CH₂O and (CO₂ + CH₃) in the metastable ion time-frame, while the maleate ester fragments primarily by loss of CH₃O. At higher internal energies both molecular ions fragment primarily by loss of CH₃O but the fragment ion from the maleate ester shows a greater stability, presumably because it assumes the cyclic cationated maleic anhydride structure. The diethyl maleate and diethyl fumarate molecular ions show identical metastable ion characteristics; in addition the [COS]⁺· charge exchange mass spectra are very similar. These results indicate that low-energy molecular ions interconvert. At higher internal energies interconversion does not occur, and, although both moiecular ions fragment by loss of C₂H₅O, the resultsint fragment ions show different stabilities and fragmentation reactions.     

Mass spectrometric fragmentation of saturated six membered heterocyclic systems containing two chalcogen family atoms

The mass spectra of six-membered saturated heterocycles containing oxygen, sulphur, selenium and tellurium in the 1,4-positions have been measured. The differing fragmentation modes have been characterized using high resolution, low voltage and metastable ion scan techniques. The important decomposition reactions of the molecular ions involve elimination of C₂H₄ and CH₂X (X is a chalcogen atom) and formation of [C₂H₄X]⁺ and C₂H₅⁺. The propensities of these reactions vary systematically as a function of the ability of the chalcogen to stabilize a positive charge.     

A study of the electron impact induced retro-diels-alder process with selected 5,6,6a, 7,12,12a-hexahydrobenzo[a]anthracenes

The mass spectra of 5,6,6a,7,12,12a-hexahydrobenzo[a]anthracene and 2-methoxy, 3-methoxy-, 4-methoxy and 1-methyl-4-methoxy derivatives are reported. Among the fragment ions observed under electron impact ionization, [C₈H₈]^+· and [M? C₈H₈]^+· can be generated by a retro-Diels-Alder process. Studies of metastable ion reactions show these ions to be formed by fragmentation directly from the molecular ion. The CA spectra of the [C₈H₈]^+· ions from the subject compounds were compared with spectra from ions of the same composition from various sources. From these data, kinetic energy release measurements and stereochemical considerations, it is concluded that these ions are formed by a stepwise, rather than a concerted mechanism.     

Structure and fragmentation of [C3H7O]+ ions formed by chemical ionization

The unimolecular metastable and collision-induced fragmentation reactions of [C₃H₇O]⁺ ions produced by gas-phase protonation of acetone, propanal, propylene oxide, oxetan and allyl alcohol have been studied. The CID studies show that protonation of acetone and allyl alcohol yield different stable ions with distinct structures while protonation of propanal or propylene oxide yield [C₃H₇O]⁺ ions of the same structure. Protonated oxetan rearranges less readily to give the same structure(s) as protonated propanal and propylene oxide. The [C₃H₇O]⁺ ions fragmenting as metastable ions after formation by CI have a higher internal energy than the same ions fragmenting after formation by EI. Deuteronation of the C₃H₆O isomers using CD₄ reagent gas shows that loss of C₂H₃D proceeds by a different mechanism than loss of C₂H₄. The results are discussed in terms of potential energy profile for the [C₃H₇O]⁺˙ system proposed earlier.     

The structures and formation of [C4H6N]+ ions 2—ion structures derived from 2-methylpropanenitrile

The loss of a hydrogen atom from ionized 2-methylpropanenitrile is preceded by a drastic rearrangement of the molecular ion. The result of this fragmentation is the generation of two stable structurally different [C₄H₆N]⁺ ions, formed via different pathways. Their structures can be established by a careful comparison of the metastable ion spectra, collision activation spectra, and charge stripping spectra from the compound and its three deuterium labeled analogues and from [C₄H₆N]⁺ ions generated from reference compounds via electron impact ionization or in selected ion/molecule reactions.     

Internal energy effects on metastable characteristics. The structure of [C3H7O]+ ions

The effect of changes in the internal energy distribution of the fragmenting ion on the ratio of metastable ion intensities for two competing fragmentation reactions has been investigated both theoretically and experimentally. Model calculations have shown that if the competing reactions have significantly different activation energies the metastable intensity ratio does depend on the internal energy distribution although large changes are necessary before the ratio changes by more than a factor of two. Experimentally the metastable characteristics of [C₃H₇O]⁺ ions of nominal structures [CH₃CH₂O⁺?CH₂] (I), [(CH₃)₂C?O⁺H] (II), [CH₃CH₂CH?O⁺H] (III) and [CH₃O⁺?CHCH₃] (IV) have been examined. For each structure the metastable characteristics are found to be distinctive and independent of changes in the internal energy distribution of the fragmenting ion where these changes result from altering the precursor of the [C₃H₇O]⁺ ions. It is suggested that these internal energy changes can be estimated from the fraction of [C₃H₇O]⁺ ions which fragment in the ion-source. It is concluded that structures I to IV represent stable and distinct ionic structures.     

The structures of [C5H5O]+ ions formed from isomers of nitrophenol in the gaseous phase

Translational energy release measurments on metastable ions are used in the comparison of the structures of isomeric ions. Metastable ions, m₂⁺, formed from m₁⁺ ions as the result of a high energy process in the ion source are compared with isomeric metastable ions formed as daughters from fragmentation of metastable m₁⁺ ions in a field. In the case of o-, m- and p-nitrophenol the structure of the [C₅H₅O]⁺ ions formed from [C₆H₅O]⁺ ions by these two independent methods is different as verified by comparison of the behaviour of [C₅H₅O]⁺ ions formed from several other compounds.     

Isomerization and fragmentation of methylfuran ions and pyran ions in the gas phase

The mutual interconversion of the molecular ions [C₅H₆O]⁺ of 2-methylfuran (1), 3-methylfuran (2) and 4H-pyran (3) before fragmentation to [C₅H₅O]⁺ ions has been studied by collisional activation spectrometry, by deuterium labelling, by the kinetic energy release during the fragmentation, by appearance energles and by a MNDO calculation of the minimum energy reaction path. The electron impact and collisional activation mass spectra show clearly that the molecular ions of 1–3 do not equilibrate prior to fragmentation, but that mostly pyrylium ions [C₅H₅O]⁺ arise by the loss of a H atom. This implies an irreversible isomerization of methylfuran ions 1 and 2 into pyran ions before fragmentation, in contrast to the isomerization of the related systems toluene ions/cycloheptatriene ions. Complete H/D scrambling is observed in deuterated methylfuran ions prior to the H/D loss that is associated with an iostope effect k_H/k_D = 1.67–2.16 for metastable ions. In contrast, no H/D scrambling has been observed in deuterated 4H-pyran ions. However, the loss of a H atom from all metastable [C₅H₅O]⁺ ions gives rise to a flat-topped peak in the mass-analysed ion kinetic energy spectrum and a kinetic energy release (T₅₀) of 26 ± 1.5 kJ mol^?1. The MNDO calculation of the minimum energy reaction path reveals that methylfuran ions 1 and 2 favour a rearrangement into pyran ions before fragmentation into furfuryl ions, but that the energy barrier of the first rearrangement step is at least of the same height as the barrier for the dissociation of pyran ions into pyrylium ions. This agrees with the experimental results.     

Formation of aniline-like ions by electron-impact-induced elimination of CO from formanilide

The metastable peak intensity ratios for elimination of HNC vs DNC from the [M ? CO]⁺· ion of deuterium labelled analogues of formanilide show that the formyl hydrogen atom migrates to nitrogen prior to or during CO expulsion to form a [C₆H₇N]⁺· ion of aniline-like structure. An examination of metastable peaks does not allow similar conclusions to be reached for methyl substituted formanilides. Low abundance [C₆H₆O]_+· ions are formed by HNC elimination from the formanilide molecular ion in a reaction where three covalent bonds to the formyl carbon are broken.