Synthesis and Structure Elucidation of Pyrimidobenzimidazoles and Fused Derivatives II [1]. Dodecahydrobenzimidazo-[2,1-b]quinazolines and Decahydrobenzimidazo-[2,1-b]benzo[h]quinazolines [2]

Summary.  The cyclization reactions of trans-3a-hexahydro-2-benzimidazolamine with 2-alkylidene- and 2-benzylidenecyclohexanones and α-tetralones, respectively, yield mixtures of two isomeric condensates each. Thorough high resolution NMR analyses (¹H and ¹³C NMR, HH-COSY, gs-HSQC, gs-HMBC, 1D TOCSY, and 1D NOE difference spectra) revealed that the corresponding isomers are in all cases linearly fused diastereomeric 12α- and 12β-substituted trans-6aα-dodecahydrobenzimidazo[2,1-b]quinazolines and 7α-substituted trans-8aβ- and trans-8aα-decahydrobenzimidazo[2,1-b]benzo[h]quinazolines, respectively. The formation of corresponding angularly fused regioisomers was not observed so far. The stereochemistry and the tautomerism of some bases and their hydrochlorides as well as the regiospecific course of the cyclization reactions are discussed. Biological tests showed that the novel compounds don’t exert remarkable antibacterial and antimycotic effects. Received November 3, 1999. Accepted November 30, 1999     

Beitrag zum Reaktionsmechanismus der Synthese von Seychellen [1]

New Mechanistical Details Concerning the Synthesis of Seychellen [1] In the last step of our synthesis of Seychellen ( 2 ) [1], the solvolysis of 1 , only one side-product was formed, namely 3 (Scheme 1). Now the structure of 3 has been elucidated, mainly by spectroscopic studies of its derivatives 7 and 9 (Scheme 2). In order to differentiate between two different solvolytic pathways from 1 to 3 (see Scheme 1 and 3) d₃- 1 was prepared. Solvolysis of d₃- 1 proved the mechanism shown in Scheme 1. Solvolysis of 1 and of 2-epi- 1 , respectively, furnished the same product distribution, which makes a common intermediate a very probable. In both cases 10 is an intermediate, which is slowly converted into 2 and 3 . 2-epi- 1 was prepared from 1 (Scheme 5). Kinetic measurements with 1 , d₃- 1 and 2-epi- 1 are also in agreement with the mechanism drawn in Scheme 4: k₁(72°) = (5,2±0,5) · 10^?5 sec^?1, k₁(H)/k₁(D)(72°) = 1,4±0,15; k₂(H)/k₄(H) = 0,66 and k₂(H)/k₂(D) = 2,2 if k₄(H) ≈ k₄(D) is assumed.     

Synthesis,Structures, and Properties of Two Novel Supramolecular Architectures Constructed from [2,3‐f]Pyrazino[1,10]phenanthroline‐2,3‐dicarboxylic Acid

Two new compounds, [Ag(Hppdb)]_n ( 1 ) and {[Ag₂(Hppdb)₂(bpe)] · 5.5H₂O}_n( 2 ) [H₂ppdb = [2,3‐f]pyrazino[1,10]phenanthroline‐2,3‐dicarboxylic acid, bpe = trans‐1,2‐bis(4‐pyridyl)ethylene], were synthesized and characterized. In 1 , Hppdb^– ions link Ag^I cations to form an infinite 1D [–Ag–(Hppdb)–Ag–]_n chain, furthermore, the dimensionality is extended to 2D layers through synergistic π–π stacking, hydrogen‐bonding and weak Ag ··· O interactions. Correspondingly, the dimeric [(Ag)(Hppdb)]₂ subunits in 2 are connected by bpe ligands to generate a loop‐link‐shaped 1D chain motif, which is further joined through a R₂²(18)C–H ··· O hydrogen‐bonding ring to afford interesting diagonal/diagonal inclined catenation 2D + 2D → 3D supramolecular architectures. In addition, solid‐state properties such as photoluminescence and thermal stability of the two compounds were studied.     

The synthesis of novel polycyclic heterocyclic ring systems via photocyclization. 5. [1]Benzothieno[2,3-c]naphtho[2,1-f]-quinoline and [1]benzothieno[2,3-c]naphtho[1,2-g]quinoline

Two previously unknown heterocyclic ring systems, namely, [1]benzothieno[2,3-c]naphtho[2,1-f]quinoline ( 4 ) and [1]benzothieno[2,3-c]naphtho[1,2-g]quinoline ( 5 ) were synthesized via photocyclization of 3-chloro-N-(2-phenanthryl)benzo[b]thiophene-2-carboxamide ( 8 ) followed by chlorination and dechlorination. The total assignment of their ¹H- and ¹³C-nmr spectra was determined by utilizing inverse-detected HMQC and HMBC two-dimensional nmr spectroscopic methods.     

Complete assignment of the 1h- and 13c-nmr spectra of [1]benzothieno[2,3-c]naphtho[1,2-h]quinoline and [1]benzothieno[2,3-c]naphtho[1,2-h][1,2,4]triazolo[4,3-a]quinoline. Concerted use of two-dimensional nmr techniques

The ¹H- and ¹³C-nmr spectra of [1]benzothieno[2,3-c]naphtho[1,2-h]quinoline and [1]benzothieno[2,3-c]-naphtho[1,2-h][1,2,4]triazolo[4,3-a]quinoline were totally assigned using a combination of two-dimensional nmr techniques. After correlation of the proton signals by a COSY spectrum and one-bond heteronuclear correlation, complete assignment of the ¹H- and ¹³C-nmr spectra of the novel heterocyclic compounds required the application of long-range CH coupling information particularly for quarternary resonance assignments and the orientations of individual spin systems relative to one another.     

Synthesis and characterization of a new pillar[5]arene-based [1]rotaxane

In this study, we reported the synthesis of three kinds of mono-functional pillar[5]arene derivatives PRI, PRII and R and their structures were studied by 1D and 2D NMR spectra and mass spectra. The 2D NMR spectra including ¹H-¹³C HSQC, ¹H-¹H COSY and NOESY spectra indicated that PRI and PRII are both stable self-included pseudo[1]rotaxanes in CDCl₃. These original structures are promising compounds for the design of pillar[5]-based [1]rotaxane. And the results showed that R could exist stable in CDCl₃ and DMSO because of the coordination of N-H?O hydrogen bonding interaction and C-H?π interaction.     

Synthesis of [2′‐2H1]‐Ribonucleosides

New syntheses of C(2′)‐deuterated ribonucleosides have been accomplished starting either from 3,5‐di‐O‐benzyl‐1‐O‐methyl‐α,β‐D ‐ribofuranose ( 1b ) or 2,3‐O‐isopropylidene‐D ‐ribose ( 14 ), with >97 atom‐% D incorporation in both cases. The former is suited to the demands of multiple‐site deuteration or uniform ¹³C/multiple ²H double labeling of the ribofuranose moiety, whereas the latter is particularly appropriate for single‐site ²H labeling for mechanistic studies of enzyme reactions.     

Structure elucidation of [1,3]oxazolo[4,5‐e][2,1]benzisoxazole and naphtho[1,2‐d][1,3]‐ and phenanthro[9,10‐d]oxazoles using gradient selected gHMBC,gHMQC and gHMQC‐TOCSY NMR techniques

Structure elucidation of compounds in the benzisoxazole series ( 1 – 6 ) and naphtho[1,2‐d][1,3]‐ ( 7 – 10 ) and phenanthro[9,10‐d][1,3]oxazole ( 11 – 14 ) series was accomplished using extensive 2D NMR spectroscopic studies including ¹H–¹H COSY, long‐ range ¹H–¹H COSY, ¹H–¹³C COSY, gHMQC, gHMBC and gHMQC‐TOCSY experiments. The distinction between oxazole and isoxazole rings was made on the basis of the magnitude of heteronuclear one‐bond ¹J_{C2, H2} (or ¹J_{C3, H3}) coupling constants. Complete analysis of the ¹H NMR spectra of 11 – 14 was achieved by iterative calculations. Gradient selected gHMQC‐TOCSY spectra of phenanthro[9,10‐d][1,3]oxazoles 11 – 14 were obtained at different mixing times (12, 24, 36, 48 and 80 ms) to identify the spin system where the protons of phenanthrene ring at H‐5, H‐6 and at H‐9 and H‐7 and H‐8 were highly overlapping. Copyright © 2003 John Wiley & Sons, Ltd.     

Benzo‐Fused Double [7]Carbohelicene: Synthesis,Structures, and Physicochemical Properties

A benzo‐fused double [7]carbohelicene (D7H) was synthesized through a regioselective cyclodehydrogenation of a tetranaphthyl‐p ‐terphenyl‐based precursor. The twisted (D7H‐1) and anti ‐folded (D7H‐2) conformers of D7H were separated by recrystallization, and their double helicene structures with overlapping terminal benzene rings were unambiguously elucidated by X‐ray crystallography. A record‐high isomerization barrier (46.0 kcal mol⁻¹) in double helicenes was estimated based on density functional theory (DFT) calculation, which resulted in the excellent conformational stability of D7H. The physicochemical properties of D7H‐1 and D7H‐2 were investigated by UV/Vis absorption spectroscopy and cyclic voltammetry, displaying the variation of electronic structure upon conformational changes. The optical resolution of the racemic D7H‐1 was carried out by chiral HPLC, offering enantiopure D7H‐1‐(P ,P ) and D7H‐1‐(M ,M ), which were further characterized by circular dichroism spectroscopy.     

Desoxaphomin,das erste [13]Cytochalasan,ein möglicher biogenetischer Vorläufer der 24-Oxa-[14]cytochalasane

From cultures of a Phoma species (strain S 298) the hitherto unknown metabolite deoxaphomine has been isolated. On the basis of the spectral data, structure 1 of the (7S, 16R, 20R)-7,20-dihydroxy-16-methyl-10-phenyl-[13]cytochalasa-6(12),13^t,21^t-triene-1,23-dione is assigned to deoxaphomine. This structure is confirmed by the chemical degradation of 1 , yielding the products 4 and 6 which are identical with derivatives of phomine ( 2 )((7S,16R,20R)-7,20-dihydroxy-16-methyl-10-phenyl-24-oxa-[14]cytochalasa-6(12), 13^t,21^t-triene-1,23-dione) and cytohalasin D ( 8 ) ((7S,16S,18R,21R)-21-acetoxy-7,18-dihydroxy-16,18-dimethyl-10-phenyl-[11]sytochalasa-6(12),13^t,19^t-triene-1,17-dione). Deoxaphomine ( 1 ) is a potential biogenetic precursor of the 24-oxa-[14]cytochalasans. Preliminary results of the biological activity of deoxaphomine are reported.     

The synthesis of novel polycyclic heterocyclic ring system via photocyclization. 18. Benzo[h]naphtho-[1′,2′:4,5]thieno[2,3-c]quinoline and benzo[h]naphtho-[1′,2′:4,5]thieno[2,3-c] [1,2,4]triazolo[4,3-a]quinoline

The synthesis of two previously unknown polycyclic ring systems, benzo[h]naphtho[1′2′:4,5]-thieno[2,3-c]quinoline ( 1 ) and benzo[h]naphtho[1′,2′:4,5]thieno[2,3-c][1,2,4]triazolo[4,3-a]quinoline ( 2 ), was achieved via oxidative photocyclization of 1-chloro-N-(1-naphthyl)naphtho[2,1-b]thiophene-2-carboxamide ( 5 ). The total assignment of their ¹H and ¹³C nmr spectra was determined by the concerted use of two-dimensional nmr methods.     

Synthesis and spectral properties of substituted [1,2,4]oxadiazolo[4,5-a] [1,5] benzodiazepines

The preparation of twelve novel substituted [1,2,4]oxadiazolo[4,5-a][1,5]benzodiazepines which have potentially useful pharmacological properties; by 1.3-dipolar cycloaddition of benzonitrile oxides, generated in situ from benzohydroxamoyl chloride and triethylamine, to 1,5-benzodiazepine derivatives, is described. The structure of all products was corroborated by ir, ¹H-nmr, ¹³C-nmr and ms.     

On Tetrachlorophosphonium Chlorometallates of Rhenium and Molybdenum: Syntheses,Crystal Structures,and Magnetism of [PCl4]2[Re2Cl10] and [PCl4]3[ReCl6]2, and the Magnetic Properties of [PCl4]2[Mo2Cl10]

MoCl₄, ReCl₄, and ReCl₅ react with PCl₅ in sealed glass ampoules at temperatures between 220° and 320° to [PCl₄]₂[Mo₂Cl₁₀] ( 1 ) [PCl₄]₂[Re₂Cl₁₀] ( 2 ), and [PCl₄]₃[ReCl₆]₂ ( 3 ). 2 crystallizes isotypically to the previously reported 1 and the respective titanium and tin containing analogues. The structure (triclinic, P1, Z = 1, a = 897.3(2), b = 946.0(2), c = 687.13(9) pm, α = 95.59(2)°, β = 95.80(2)°, γ = 101.07(2)°, V = 565.4(2) 10⁶ pm³) is built of tetrahedral [PCl₄]⁺ and edge sharing double octahedral [Re₂Cl₁₀]^2– ions and can be derived from a hexagonal closest packing of Cl^– ions with tetrahedral and octahedral holes partially filled by P(V) and Re(IV), respectively. 3 crystallizes isotypically to [PCl₄]₃[PCl₆][MCl₆] (M = Ti, Sn) (tetragonal, P 4₂/mbc, Z = 4, a = 1496.2(1), c = 1363.2(2) pm). Because no evidence was found for the presence of [PCl₆]^– ions, Re in 3 has to be of mixed valency with Re^IV and Re^V sharing the same crystallographic site. The structure can be derived from a cubic closest packing or alternatively from an only sparsely distorted body centered cubic arrangement of Cl^– ions which is rarely found for anion arrays. The tetrahedral and octahedral holes are partially filled by P^V and M^IV/V, respectively. Magnetic measurements show all three compounds to be paramagnetic and confirm the oxidation state IV for Mo and Re in 1 and 2 and the mixed valence (IV/V) for Re in 3 .     

Benzo- and indoloquinolizine derivatives. VI—configuration and conformation of 4b,5,6,7,8,8a,10,11,16,16b-decahydrodibenz[f,h]indolo[2,3-a]quinolizine diastereoisomers. A 270 MHz 1H NMR study

The synthesis of a D/E cis isomer of the title compound is described. In an attempt to obtain the other D/E cis isomer, epimerisation reactions were studied. The configuration and conformation of the isomers are determined on the basis of their ¹H NMR spectra. The shift of the 16b proton on N-9 protonation indicates the quinolizidine conformation. At 270 MHz, the ABCD system of the C-10 and C-11 methylenes can be analysed. The ²J(C-10H₂), together with the multiplicity of H-8a, allows an unequivocal assignment of a cis-anti-cis structure to the only D/E cis isomer obtained.     

Biosynthesis of the cytochalasans. Part III. C-NMR. of cytochalasin B (phomin) and cytochalasin D. Incorporation of [1-13C]- and [2-13C]-sodium acetate

Sequential single frequency decoupling and partially relaxed Fourier transform (PRFT) are used to assign the natural abundance ¹³C-NMR. spectra of cytochalasin B (phomin) ( 1 ) and cytochalasin D ( 2 ). Cultures of Phoma spec. S 298 were fed [2-¹³C]-sodium acetate, and the distribution of this precursor in cytochalasin B (phomin) ( 1 ) was determined by ¹³C-NMR. spectroscopy. Likewise, the labelling patterns in cytochalasin D (zygosporin A) ( 2 ) from Zygos-posium masonii could be identified after incorporation of [2-¹³C]-sodium acetate and [l-¹³C]-sodium acetate. The results confirm previous proposals for the biogenesis of the cytochalasans from phenylalanine, methionine, and a C₁₈, or C₁₆, polyketide part.     

Calculation of 1H chemical shifts of [n]annuleno[m]annulenes and [n]annulenyl[m]annulenes

The ring current and local anisotropic contributions to the ¹H chemical shifts of [n]annuleno[m]annulenes and [n]annulenyl[m]annulenes with n, m = 12, 14, 18 and n, m = 13, 15 are calculated. The agreement between experimental and calculated shifts for the few known compounds is very good so that the predictions for the as yet unknown compounds are reliable. The effect of an annulene ring on the shifts of the protons at the other ring in these bicyclic compounds is discussed for several types of fusion of the two constituent annulenes.     

[4+2]-Cyclodimer of sabinone: formation,crystal structure,and NMR spectra

Oxidation of (+)-sabinol, (1S,3R,5S)-1-isopropyl-4-methylidenebicyclo[3.1.0]hexan-3-ol, by active MnO₂ afforded not the expected sabinone but only its [4+2]-cyclodimer. The molecular structure of the latter was established by X-ray diffraction analysis. The ¹H and ¹³C NMR spectra of this cyclodimer were interpreted using 2D NMR spectroscopy.     

Thermal unimolecular isomerization of 1,4-dimethylbicyclo[2.2.0]hexane, 1,4-dimethylbicyclo[2.1.1]hexane,and 1,4-dimethylbicyclo[2.1.0]pentane

The thermal isomerization of the title compounds was studied in the vapor phase. Over the temperature range from 445.1 to 477.5°K, 1,4-dimethylbicyclo[2.2.0]hexane underwent a homogeneous unimolecular reaction to 2,5-dimethyl-1,5-hexadiene, the rate constants being represented by the equation: k = 1.86 × 10¹¹ exp (?31000 ± 1800/RT) sec^?1. Over the temperature range from 630.0 to 662.2°K, 1,4-dimethylbicyclo[2.1.1]-hexane also underwent a unimolecular isomerization to the same product, the rate constants being given by the equation: k = 8.91 × 10¹⁴ exp (?56000 ± 900/RT) sec^?1. The pyrolysis of 1,4-dimethylbicyclo[2.1.0]pentane gave 1,3-dimethylcyclopentene-1 and 2,4-dimethyl-1,4-pentadiene in the ratio of 9:1. The former reaction was influenced by surface effects but the latter was not. The rate constants for the formation of 2,4-dimethyl-1,4-pentadiene fitted the equation: k = 1.66 × 10¹⁷ exp (?57400 ± 3100/RT) sec^?1. The effect of the two methyl groups at the bridgehead positions in these molecules in influencing the rate of decomposition is discussed in terms of the non-bonded repulsive forces between the substituents.     

Synthesis and total 1H-NMR assignment of [1]benzothieno-[2,3-c] [1,10]phenanthroline

The synthesis of [1]benzothieno[2,3-c][1,10]phenanthroline ( 5 ) is described. It was obtained in four steps from known starting materials. The basic skeleton of the molecule and of the phenanthroline ring were formed via photocyclization. The total assignment of ¹H-nmr spectra was accomplished with the aid of two-dimensional nmr methods.     

Saturated heterocycles. 254 . synthesis and stereochemistry of saturated or partially saturated pyridazino-[6,1-b]- and phthalazino[1,2-b]quinazolinones

By the reaction of anthranilic hydrazide 1 with cis-2-(p-methylbenzoyl)-1-cyclohexanecarboxylic acid 2a or diendo-3-(p-methylbenzoyl)bicyclo[2.2.1]heptane-2-carboxylic acid 2b , fused tetra- and pentacyclic ring systems 3a, b were prepared, trans-2-Amino-1-cyclohexanecar-bohydrazide 4b was reacted with 3-(p-chlorobenzoyl)propionic acid 5 to yield the pyridazino[6,1-b]quinazolinone 6 . From the reaction of cis-2-amino-1-cyclohexanecarbohydrazide 4a with 2a , three isomeric partially saturated 8H-phthalazino[1,2-b]quinazolin-8-ones 7a-c were formed. The reaction of diexo-2-aminobicyclo[2.2.1]heptane-3-carbohydrazide 4c and 2a furnished the pentacyclic derivatives 8 and 9 containing a 3-aryl-4,5-dihydropyridazine or 3-arylhexahydropyridazine ring C with cis annelated C/D rings. The formation of 8 and 9 involving different ring systems can be rationalized by two reaction pathways: (i) in the bislactam 9 the carboxyl group acylates the hydrazide, while (ii) in 8 it forms a pyridazine ring with the cyclic amino group by cyclocondensation. The structures of the products were elucidated by ¹H and ¹³C nmr methods, including DEPT, DNOE and 2D-HSC measurements.