Mechanisms for H2O decomposition on the Si(111)‐7 × 7 surface: A DFT cluster model study

The mechanisms for the complete decomposition of water molecules on the Si (111)‐7 × 7 surface were investigated theoretically. The reaction pathways for dissociation of four water molecules over the adatom and rest atom sites were calculated using the density functional theory (DFT) in conjunction with the B3LYP functional. The calculated results demonstrated that the initial O? H bond dissociation from the first H₂O to form the adsorbed OH species is more preferential on the adatom site (Si_a) than the rest atom site (Si_r) of Si (111)‐7 × 7. Four water molecules dissociate successively over the adatom site, backbonds of adatoms which are saturated by OH species can reasonably be the place of insertion of oxygen atoms, yielding a tetrahedral SiO₄ structure with one on top and three inserted oxygen atoms. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Chemisorption of thiol‐functionalized metallocene molecules on Si(111)‐ Ag√3×√3 surface: A density functional theory study

Herein, chemical adsorption properties of the thiol‐functionalized metallocene molecules [M(C₅H₄SH)₂] on Si(111)‐Ag√3×√3 surface were investigated using density functional theory calculation. For this purpose, thiol‐modified ferrocene [Fe(C₅H₄SH)₂], osmocene [Os(C₅H₄SH)₂], and ruthenocene [Ru(C₅H₄SH)₂] molecules were attached on the surface via two different binding models. The more favorable chemical binding energies of [Fe(C₅H₄SH)₂], [Os(C₅H₄SH)₂], and [Ru(C₅H₄SH)₂] molecules were calculated as ?3.42, ?2.15, and ?2.00 eV, respectively. The results showed that the adsorption energies of metallocene molecules change independently by increasing the radius of metal ions where on going down the group of the periodic table. The calculated adsorption energies showed that [Fe(C₅H₄SH)₂] molecule was more stable on the Si(111)‐Ag√3×√3 surface. By calculating the electronic band structure for metallocene/Si(111)‐Ag√3×√3 surfaces, we identified a flat dispersion band in a part of the surface Brillouin zone. © 2015 Wiley Periodicals, Inc.     

Si(1 1 1)-(6 × 6)Au surface morphology and nucleation of Pb at low temperature

The morphologies of the Si(1 1 1)-(6 × 6)Au surface and the nucleation of Pb have been investigated at temperatures below room temperature using scanning tunnelling microscopy (STM). The STM scans of the clean Si(1 1 1)-(6 × 6)Au surface revealed exceptionally rich and strongly bias-dependent details within the unit cell. After deposition of about 0.01 ML of Pb(1 1 1), at temperatures above 180 K, the single Pb atoms formed a two-dimensional mesh with (6 × 6)-Au periodicity. In this early stage of deposition, the Pb atoms occupied predominantly one specific site of the (6 × 6) unit cell. The local symmetry of this site determined the further growth of the Pb layer. As a consequence, the structure of the Pb layer on Si(1 1 1)-(6 × 6)Au is rotated of 30° relative to that of the Pb layer on Si(1 1 1)-(7 × 7).     

Ordered arrays of semi-crown ligands on an Au(111) electrode surface: in situ STM study

Self-organized systems have attracted much at-tention due to their potential applications in nano- technology as a bottom-up?approach for the con-struction of molecule-scale devices and nanostruc-tures[1—4]. Beyond the self-assembly of small molecu-lar building blocks, Schnherr et al. recently suc-ceeded in arranging the rosette supramolecular nanos-tructures in two dimensions on HOPG[5,6]. Moreover, interest has tremendously increased in the su-pramolecular structures via coordination-dr…     

The Adsorption and Thermal Decomposition of CH2CO (CD2CO) on Si(111)-7 × 7

The adsorption and thermal decomposition of ketene on Si(l 11)-7 × 7 were investigated using various surface analysis techniques. When the surface was exposed to ketene at 120 K, two CO stretching modes at 220 and 273 meV appeared in HREELS, corresponding to two adsorbed ketene states. After the sample was annealed at ?250 K, the 273 and the 80 meV peaks vanished, indicating the disappearance of one of the adsorption states by partial desorption of the adsorbate. In a corresponding TPD measurement, a desorption peak for ketene species was noted at 220 K. Annealing the sample at 450 K caused the decomposition of the adsorbate, producing CH_x and O adspecies. Further annealing of the surface at higher temperatures resulted in the breaking of the CH bond, the desorption of H and O species and the formation of Si carbide. The desorption of H at 800 K was confirmed by the appearance of the D₂ (m/e = 4) TPD peak at that temperature when CD₂CO was used instead of CH₂CO.     

Electrochemical oxidative formation of ordered monolayers of thiol molecules on Au(111) surface

Electrochemical oxidative formation of thiolate monolayers on a Au(111) surface in KOH ethanol solutions of various thiol concentrations is described. The formation process was investigated by electrochemistry, in situ scanning tunneling microscopy (STM), and surface X‐ray diffraction (SXRD). The reductive charge in the linear sweep voltammogram after keeping the potential at +0.1 V increased with holding time and reached the saturated value of 103 µC cm^?2, corresponding to the full monolayer coverage of the ( ) structure. The desorption peak shifted negatively with holding time even after the monolayer was formed, suggesting that ordering of the monolayer requires a much longer time than full coverage adsorption. The herringbone structure, corresponding to the ( × 23) structure, was observed on the Au(111) surface in KOH ethanol solution by in situ STM, which shows that a clean surface was exposed. When hexanethiol ethanol solution was added into the ethanol solution at ?450 mV so that the final thiol concentration was higher than ca. 5 µM, generation of vacancy islands (VIs) was observed, which shows the potentiostatic monolayer formation. When the potential was scanned positively from ?950 mV where a clean reconstructed Au(111) surface was exposed, generation of VIs was observed accompanied by anodic current flow. During both oxidative adsorption and reductive desorption of the monolayer, the shape of the steps of the gold surface changed drastically, which suggests that the gold atoms on the surface are extremely mobile during the monolayer formation. SXRD measurement confirmed the surface reconstruction lifting upon monolayer formation. © 2009 The Japan Chemical Journal Forum and Wiley Periodicals, Inc. Chem Rec 9: 199–209; 2009: Published online in Wiley InterScience ( www.interscience.wiley.com ) DOI 10.1002/tcr.200900002     

氧化锌有序结构在Au(111)和Cu(111)上的生长

利用NO₂或O₂作为氧化剂,研究了氧化锌在Au(111)和Cu(111)上的生长和结构。NO₂表现了更好的氧化性能,有利于有序氧化锌纳米结构或薄膜的生长。在Au(111)和Cu(111)这两个表面上,化学计量比氧化锌都形成非极性的平面化ZnO(0001)的表面结构。在Au(111)上,NO₂气氛下室温沉积锌倾向于形成双层氧化锌纳米结构;而在更高的沉积温度下,在NO₂气氛中沉积锌则可同时观测到单层和双层氧化锌纳米结构。O₂作为氧化剂时可导致形成亚化学计量比的ZnO_x结构。由于铜和锌之间的强相互作用会促进锌的体相扩散,并且铜表面可以被氧化形成表面氧化物,整层氧化锌在Cu(111)上的生长相当困难。我们通过使用NO₂作为氧化剂解决了这个问题,生长出了覆盖Cu(111)表面的满层有序氧化锌薄膜。这些有序氧化锌薄膜表面显示出莫尔条纹,表明存在一个ZnO和Cu(111)之间的莫尔超晶格。实验上观察到的超晶格结构与最近理论计算提出的Cu(111)上的氧化锌薄膜结构相符,具有最小应力。我们的研究表明,氧化锌薄膜的表界面结构可能会随氧化程度或氧化剂的不同而变化,而Cu(111)的表面氧化也可能影响氧化锌的生长。当Cu(111)表面被预氧化成铜表面氧化物时,ZnO_x的生长模式会发生变化,锌原子会受到铜氧化物晶格的限域形成单位点锌。我们的研究表明了氧化锌的生长需要抑制锌向金属基底的扩散,并阻止亚化学计量比ZnO_x的形成。因此,使用原子氧源有利于在Au(111)和Cu(111)表面上生长有序氧化锌薄膜。     

Adsorption of polyfunctional 5‐fluorouracil and 2,4‐dithio‐5‐fluorouracil on Au(111) surface: Structure,energy, and electronic transmission

Adsorption of 5‐fluorouracil (5‐FU) and 2,4‐dithio‐5‐fluorouracil (2,4‐DT‐5‐FU) on Au(111) surface at low coverage is studied by using periodic‐slab‐density functional theory calculation. Isolated 5‐FU molecule adsorbs preferentially at bridge site in a vertical configuration via N? H group by forming the N? H···Au nonconventional H‐bond. The formation of the anchor Au? O bond is not observed. Substitution of oxygen atoms of 5‐FU with sulfur strongly influences the nature of adsorption and leads to the Au? S anchor bond and the N? H···Au nonconventional H‐bond of single 2,4‐DT‐5‐FU molecule on Au(111) surface. The adsorption site and orientation of 2,4‐DT‐5‐FU molecule on the surface are similar to those of 5‐FU. The metal–molecule coupling effects at asymmetric Au/S(N? H)S/mol/C? H/Au and Au/N? H/mol/O/Au transport junctions and symmetric Au/S(N? H)S/mol/mol/S(N? H)S/Au and Au/O/mol/mol/O/Au transport junctions are also investigated. The electronic structure is analyzed in detail, and the obtained results are used for illustrating the electron transmission in metal–molecule–metal systems. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Effect of pH on the Enantiospecificity of Homocysteine Monolayer on Au(111) for the Redox Reaction of 3,4‐Dihydroxyphenylalanine

The effect of pH on the enantiospecificity of Au (111) electrode modified with L ‐homocysteine was evaluated for the electrochemical redox reaction of 3,4‐dihydroxyphenylalanine (DOPA). Cyclic voltammetric peaks clearly exhibited enantiospecificity at pH 0.6 and 2, whereas no enantiospecificity was observed at pH 3, 4, and 5.5. Scanning tunneling microscopy confirmed the highly ordered (2√3×3√3)R30° structure of L ‐homocysteine at pH 0.6, at which L ‐homocysteine molecules form a dimer through the hydrogen‐bond between carboxy groups (COOH), while a disordered structure was observed at pH 5.5. These results suggest that the dimer formed in the acidic solutions at pH below 3 plays an important role in providing the enantiospecificity to the Au(111) surface.     

离子液体中Au(111)和Pt(111)表面Ge欠电位沉积的现场STM研究

本文研究BMIPF₆离子液体中Au(111)和Pt(111)表面Ge的电沉积行为. 循环伏安法测试结果表明,在含0.1 mol·L^-1 GeCl₄的BMIPF₆溶液Au(111)和Pt(111)表面均有两个与Ge沉积过程相关的还原峰. 第一个还原峰包含了Ge⁴⁺还原成Ge²⁺及Ge的欠电位沉积,第二个还原峰对应Ge的本体沉积. 现场扫描隧道显微镜研究结果表明,Ge在Au(111)和Pt(111)表面均有两层欠电位沉积. 第一层欠电位沉积厚度约为0.25 nm、形貌平整、带有缝隙的亚单层结构. 第二层欠电位沉积形貌相对粗糙的点状团簇结构. 该欠电位沉积过程伴随表面合金化.     

New insights on the Cd UPD on Au(111)

The Cd underpotential deposition (UPD) process on Au(111) was analyzed by means of combined electrochemical measurements and in situ scanning tunneling microscopy (STM). In the underpotential range 300?ΔE (mV) ?400, 2D Cd islands are formed on the fcc regions of the Au(111)‐(√3 × 22) reconstructed surface without lifting the reconstruction. At lower underpotentials, the 2D Cd islands grow and, simultaneously, new 2D islands nucleate and coalesce with the previous ones forming a complete condensed Cd monolayer (ML). STM images and long time polarization experiments performed at ΔE = 70 mV demonstrate the formation of an Au? Cd surface alloy. At ΔE = 10 mV, the formation of the complete Cd ML is accompanied by a significant Au? Cd surface alloying and the kinetic results reveal two different solid‐state diffusion processes. The first one, with a diffusion coefficient D₁ = 4 × 10^?17 cm² s^?1, could be ascribed to the mutual diffusion of Au and Cd atoms through a highly distorted (vacancy‐rich) Au? Cd alloy layer. The second and faster diffusion process (D₂ = 7 × 10^?16 cm² s^?1) is associated with the appearance of an additional peak in the anodic stripping curves and could be attributed to the formation of another Cd_zAu_x alloy phase. Copyright © 2008 John Wiley & Sons, Ltd.     

Ordered arrays of semi-crown ligands on an Au(111) electrode surface: <Emphasis Type="Italic">in situ</Emphasis> STM study

In situ scanning tunneling microscopy (STM) and cyclic voltammetry were employed to investigate the adsorption structures of three semi-crown ligands on an Au(111) surface under the potential control. It is found that all the molecules formed ordered arrays in 0.1 mol/L HClO₄ solution, although their geometric structures are complex and asymmetric. The driving force was supposed to come from the balance between intermolecular and molecule-substrate interactions. High resolution STM images revealed internal molecular structures, orientations and packing arrangements in the ordered adlayers. The results are useful for preparing ordered arrays of transition metal-mediated nanostructures.     

噻吩在M(111)(M=Pd,Pt, Au)表面的吸附

采用密度泛函理论(DFT), 选取DMol³程序模块, 对噻吩在M(111) (M=Pd, Pt, Au)表面上的吸附行为进行了探讨. 通过对噻吩在不同底物金属上的吸附能、吸附构型、Mulliken 电荷布居、差分电荷密度以及态密度的分析发现, 噻吩在Pd(111)面上的吸附能最大, Pt(111)面次之, Au(111)面最小. 吸附后, 噻吩在Au(111)面上的构型几乎保持不变, 最终通过S端倾斜吸附于top 位; 噻吩在Pd(111)及Pt(111)面上发生了折叠与变形, 环中氢原子向上翘起, 最终通过环平面平行吸附于hollow 位. 此外, 噻吩环吸附后芳香性遭到了破坏, 环中碳原子发生sp³杂化, 同时电子逐渐由噻吩向M(111)面发生转移, M(111)面上的部分电子也反馈给了噻吩环中的空轨道, 这种协同作用最终导致了噻吩分子稳定吸附于M(111)面.     

噻吩在M(111)(M=Pd,Pt,Au)表面的吸附(英文)

采用密度泛函理论(DFT),选取DMol3程序模块,对噻吩在M(111)(M=Pd,Pt,Au)表面上的吸附行为进行了探讨.通过对噻吩在不同底物金属上的吸附能、吸附构型、Mulliken电荷布居、差分电荷密度以及态密度的分析发现,噻吩在Pd(111)面上的吸附能最大,Pt(111)面次之,Au(111)面最小.吸附后,噻吩在Au(111)面上的构型几乎保持不变,最终通过S端倾斜吸附于top位;噻吩在Pd(111)及Pt(111)面上发生了折叠与变形,环中氢原子向上翘起,最终通过环平面平行吸附于hollow位.此外,噻吩环吸附后芳香性遭到了破坏,环中碳原子发生sp3杂化,同时电子逐渐由噻吩向M(111)面发生转移,M(111)面上的部分电子也反馈给了噻吩环中的空轨道,这种协同作用最终导致了噻吩分子稳定吸附于M(111)面.     

Electrochemical Studies of the Benzoate Adsorption on Au (111) Electrode

Cyclic voltammetry (CV), differential capacity (DC), and charge densitymeasurements have been employed to study the benzoate (BZ) adsorption at the Au(111)electrode surface. Thermodynamic analysis of charge density (_M) data has beenperformed to describe the properties of the adsorbed benzoate ion. The Gibbsexcess , Gibbs energy of adsorption G, and the number of electrons flowingto the interface per adsorbed benzoate ion at a constant potential (electrosorptionvalency) and at a constant bulk concentration of the benzoate (reciprocal of theEsin—Markov coefficient) have been determined. The results demonstrate thatalthough benzoate adsorption starts at negative charge densities, it takes placepredominantly at a positively charged surface. At the most positive potentials,the surface concentration of benzoate attains a limiting value of about 7.3×10^–10mol-cm^–2, which is independent of the bulk benzoate concentration. This valueis consistent with packing density corresponding to a closed-packed monolayerof vertically adsorbed benzoate molecules. At negative charge densities, benzoateassumes a flat (-bonded) surface coordination. The surface coordination ofbenzoate changes, by moving from a negatively to positively charged surface.At the negatively charged surface, the electrosorption bond is quite polar. Thepolarity of the chemisorption bond is significantly reduced due either to a chargetransfer or a screening of the charge on the anion by the charge on the metal.     

Insight into the π‐hole···π‐electrons tetrel bonds between F2ZO (Z = C,Si, Ge) and unsaturated hydrocarbons

The intermolecular π‐hole···π‐electrons interactions between F₂ZO (Z = C, Si, Ge) molecules and unsaturated hydrocarbons including acetylene, ethylene, 1,3‐butadiene and benzene were constructed to reveal the differences of tetrel bonds forming by carbon and heavier tetrel atoms. The ab initio computation in association with topological analysis of electron density, natural bond orbital, and energy decomposition analysis demonstrate that the strength of Si···π and Ge···π tetrel bonds is much stronger than that of C···π tetrel bonds. The Si···π and Ge···π tetrel bonds exhibit covalent or partially covalent interaction nature, while the weak C···π tetrel bonds display the hallmarks of noncovalent interaction, the electrostatic interaction is the primary influencing factor. The Si···π and Ge···π interactions are determined by both the σ‐ and π‐electron densities, while the C···π interactions are dominated mainly by the π‐electron densities. The π‐hole···π‐electrons tetrel bonds are dominated by electrostatic interaction, and polarization has a comparable contribution in the Si···π and Ge···π tetrel bonds.     

Molecular simulation of alkyl monolayers on the Si(111)surface

The structure of twelve-carbon monolayers on the H-terminated Si(111) surface is investigated by molecular simulation method. The best substitution percent on Si(111) surface obtained via molecular mechanics calculation is equal to 50%, and the (8×8) simulated cell can be used to depict the structure of alkyl monolayer on Si surface. After two-dimensional cell containing alkyl chains and four-layer Si(111) crystal at the substitution 50% is constructed, the densely packed and well-ordered monolayer on Si(111) surface can be shown through energy minimization in the suitable-size simulation cell. These simulation results are in good agreement with the experiments. These conclusions show that molecular simulation can provide otherwise inaccessible mesoscopic information at the molecular level, and can be considered as an adjunct to experiments.     

A Model Calculation for the Isomerization and Decomposition of Chemisorbed HCN on the Si(100)-2×1 Surface

Ab initio molecular orbital and hybrid density functional theory calculations have been performed to study the adsorption, isomerization, and decomposition of HCN on Si(100)-2×1 using the Si₉H₁₂ cluster model of the surface. The results of our calculations indicate that the HCN can adsorb molecularly without a barrier onto the surface with both end-on (LM1) and side-on (LM2) positions. LM1 can isomerize to LM2 with a small barrier of 8 kcal/mol. The isomerization of LM2 by H-migration from C to the N atom, requires 76 kcal/mol activation energy (c.f. 47.5 kcal/mol in the gas phase) because of surface stabilization. Both HCN(a) and HNC(a) end-on adsorbates were found to dissociate readily, as concluded in our earlier experiment, to produce H and CN adspecies. The computed vibrational frequencies of HCN, CN, and also HCNH adspecies agree reasonably well with those observed experimentally. HCNH was found to be stable, with either the C or the N attaching to the surface.     

Microwave‐assisted extraction and rapid isolation of ursolic acid from the leaves of Eucalyptus × hybrida Maiden and its quantification using HPLC‐diode array technique

Ursolic acid (UA) is the most important bioactive phytoconstituent of Eucalyptus × hybrida Maiden leaves and exhibits anticancer, antimutagenic, anti‐inflammatory, antioxidative, and antiprotozoal activities. In this study, microwave‐assisted extraction technique was employed for rapid isolation of UA from the leaves of Eucalyptus × hybrida and simultaneously HPLC‐diode array method was developed for the quantification of UA. Effects of several experimental parameters on the extraction efficiencies of UA, such as type and volume of extraction solvents, microwave power and extraction time, were evaluated. The optimal extraction conditions were found to be 20 mL of a mixture of chloroform/methanol, 60:40; liquid‐to‐material ratio, 4:1; preleaching time, 10 min; microwave power, 600 W; temperature, 50°C; and microwave irradiation time, 5 min. Under the optimum conditions, the yield of UA was found to be 1.95 ± 0.08% in the dry leaves of Eucalyptus × hybrida. The results showed that microwave‐assisted extraction is a more rapid extraction method with higher yield and lower solvent consumptions than the conventional method. It is a faster, convenient, and appropriate method and it may be used for rapid isolation and quantification of UA and other important phytoconstituents present in the leaves of Eucalyptus × hybrida.     

Molecular simulation of alkyl monolayers on the Si(111) surface YUAN

The preparation of monolayers on silicon surface is of growing interest for potential applica-tions in biosensor or semiconductor technology[1—5]. The alkyl modified Si(111) surfaces[6—10] can be obtained using the thermal, catalyzed, or photochemical reaction of hydrogen-terminated sili-con with alkenes, Grignard reagents, and so on. At the same time, the monolayer properties on Si(111) surface have been studied by a variety of experimental methods[8—10] such as X-ray photo-electron spect…