Recombination of the hydrated electron at high temperature and pressure in hydrogenated alkaline water

Pulse radiolysis experiments were performed on hydrogenated, alkaline water at high temperatures and pressures to obtain rate constants for the reaction of hydrated electrons with hydrogen atoms (H* + e-(aq) --> H(2) + OH-, reaction 1) and the bimolecular reaction of two hydrated electrons (e-(aq) + e-(aq) --> H(2) + 2 OH-, reaction 2). Values for the reaction 1 rate constant, k(1), were obtained from 100 - 325 degrees C, and those for the reaction 2 rate constant, k(2), were obtained from 100 - 250 degrees C, both in increments of 25 degrees C. Both k(1) and k(2) show non-Arrhenius behavior over the entire temperature range studied. k(1) shows a rapid increase with increasing temperature, where k(1) = 9.3 x 10(10) M(-1) s(-1) at 100 degrees C and 1.2 x 10(12) M(-1) s(-1) at 325 degrees C. This behavior is interpreted in terms of a long-range electron-transfer model, and we conclude that e-aq diffusion has a very high activation energy above 150 degrees C. The behavior of k(2) is similar to that previously reported, reaching a maximum value of 5.9 x 10(10) M(-1) s(-1) at 150 degrees C in the presence of 1.5 x 10(-3) m hydroxide. At higher temperatures, the value of k(2) decreases rapidly and above 250 degrees C is too small to measure reliably. We suggest that reaction 2 is a two-step reaction, where the first step is a proton transfer stimulated by the proximity of two hydrated electrons, followed immediately by reaction 1.     

Activation volume measurement for C[bond]H activation. Evidence for associative benzene substitution at a platinum(II) center

The reaction of the platinum(II) methyl cation [(N-N)Pt(CH(3))(solv)](+) (N-N = ArN[double bond]C(Me)C(Me)[double bond]NAr, Ar = 2,6-(CH(3))(2)C(6)H(3), solv = H(2)O (1a) or TFE = CF(3)CH(2)OH (1b)) with benzene in TFE/H(2)O solutions cleanly affords the platinum(II) phenyl cation [(N-N)Pt(C(6)H(5))(solv)](+) (2). High-pressure kinetic studies were performed to resolve the mechanism for the entrance of benzene into the coordination sphere. The pressure dependence of the overall second-order rate constant for the reaction resulted in Delta V(++) = -(14.3 +/- 0.6) cm(3) mol(-1). Since the overall second order rate constant k = K(eq)k(2), Delta V(++) = Delta V degrees (K(eq)) + Delta V(++)(k(2)). The thermodynamic parameters for the equilibrium constant between 1a and 1b, K(eq) = [1b][H(2)O]/[1a][TFE] = 8.4 x 10(-4) at 25 degrees C, were found to be Delta H degrees = 13.6 +/- 0.5 kJ mol(-1), Delta S degrees = -10.4 +/- 1.4 J K(-1) mol(-1), and Delta V degrees = -4.8 +/- 0.7 cm(3) mol(-1). Thus DeltaV(++)(k(2)) for the activation of benzene by the TFE solvento complex equals -9.5 +/- 1.3 cm(3) mol(-1). This significantly negative activation volume, along with the negative activation entropy for the coordination of benzene, clearly supports the operation of an associative mechanism.     

Low-temperature thermolysis behavior of tetramethyl- and tetraethyldistibines

The thermolysis behavior of tetramethyl- and tetraethyldistibine (Sb(2)Me(4) and Sb(2)Et(4)) was investigated using a mass spectrometer coupled to a tubular flow reactor under near-chemical vapor deposition (CVD) conditions. Sb(2)Me(4) undergoes a gas-phase disproportionation with an estimated activation energy of 163 kJ/mol. This reaction leads to the formation of methylstibinidine, SbMe, that reacts on the surface to produce antimony film and SbMe(3). Unfortunately, this clean decomposition pathway is limited to a narrow temperature range of 300-350 degrees C. At temperatures exceeding 400 degrees C, SbMe(3) decomposes following a radical route with a consequent risk of carbon contamination. In contrast, Sb(2)Et(4) disproportionates at the hot wall of the reactor. According to mass-spectrometric data, this reaction is significant starting at a temperature of 100 degrees C, with an apparent activation energy of 104 kJ/mol. Within the temperature range of 100-250 degrees C, the precursor decomposition leads to the formation of antimony films and SbEt(3), whereas different molecular reaction pathways are significantly activated above 250 degrees C. The use of Sb(2)Et(4) lowers the risk of carbon contamination compared to Sb(2)Me(4) at high temperature. Therefore, Sb(2)Et(4) is a promising CVD precursor for the growth of antimony films in the absence of hydrogen atmosphere in a wide temperature range.     

Thermodynamics and kinetics of solute transfer in reversed-phase liquid chromatography

In this study, the thermodynamic and kinetic behavior of a homologous series of fatty acids is examined using a polymeric octadecylsilica stationary phase and a methanol mobile phase. The zone profiles are evaluated as the temperature is varied from 20 to 60 degrees C and the average pressure from 400 to 4570 p.s.i. (1 p.s.i.=6894.76 Pa). The rate constant for solute transfer from mobile to stationary phase (k(ms)) appears to be relatively constant with carbon number. In contrast, the rate constant from stationary to mobile phase (k(sm)) decreases logarithmically with increasing carbon number. This suggests that the mass transport processes become progressively slower, owing to the smaller diffusion coefficients of the larger solutes in the stationary phase. The activation energy decreases slightly in the mobile phase and increases slightly in the stationary phase with increasing carbon number. The activation energy in the stationary phase ranges from 41.6 to 55.9 kcal/mol, while the thermodynamic change in internal energy ranges from -9.8 to -29.0 kcal/mol for C10 to C22, respectively (1 cal=4.184 J). The activation volume increases with increasing carbon number in both the mobile and stationary phase. The activation volume in the stationary phase ranges from 31.7 to 211 cm3/mol, while the thermodynamic change in molar volume ranges from -27.1 to -104 cm3/mol for C10 to C22, respectively. These large changes in activation energy and volume suggest that the solutes do not enter and leave the stationary phase in a single step, but in a stepwise or progressive manner.     

Reaction of O2 with the hydrogen atom in water up to 350 degrees C

The reaction of the H* atom with O2, giving the hydroperoxyl HO2* radical, has been investigated in pressurized water up to 350 degrees C using pulse radiolysis and deep-UV transient absorption spectroscopy. The reaction rate behavior is highly non-Arrhenius, with near diffusion-limited behavior at room temperature, increasing to a near constant limiting value of approximately 5 x 10(10) M(-1) s(-1) above 250 degrees C. The high-temperature rate constant is in near-perfect agreement with experimental extrapolations and ab initio calculations of the gas-phase high-pressure limiting rate. As part of the study, reaction of the OH* radical with H2 has been reevaluated at 350 degrees C, giving a rate constant of (6.0 +/- 0.5) x 10(8) M(-1) s(-1). The mechanism of the H* atom reaction with the HO2* radical is also investigated and discussed.     

Solution structure and thermolysis of Cobeta-5'-deoxyadenosylimidazolylcobamide, a coenzyme B12 analogue with an imidazole axial nucleoside

The solution structure of Cobeta-5'-deoxyadenosylimidazolylcobamide, Ado(Im)Cbl, the coenzyme B(12) analogue in which the axial 5,6-dimethylbenzimidazole (Bzm) ligand is replaced by imidazole, has been determined by NMR-restrained molecular modeling. A two-state model, in which a conformation with the adenosyl moiety over the southern quadrant of the corrin and a conformation with the adenosyl ligand over the eastern quadrant of the corrin are both populated at room temperature, was required by the nOe data. A rotation profile and molecular dynamics simulations suggest that the eastern conformation is the more stable, in contrast to AdoCbl itself in which the southern conformation is preferred. Consensus structures of the two conformers show that the axial Co-N bond is slightly shorter and the corrin ring is less folded in Ado(Im)Cbl than in AdoCbl. A study of the thermolysis of Ado(Im)Cbl in aqueous solution (50-125 degrees C) revealed competing homolytic and heterolytic pathways as for AdoCbl but with heterolysis being 9-fold faster and homolysis being 3-fold slower at 100 degrees C than for AdoCbl. Determination of the pK(a)'s for the Ado(Im)Cbl base-on/base-off reaction and for the detached imidazole ribonucleoside as a function of temperature permitted correction of the homolysis and heterolysis rate constants for the temperature-dependent presence of the base-off species of Ado(Im)Cbl. Activation analysis of the resulting rate constants for the base-on species show that the entropy of activation for Ado(Im)Cbl homolysis (13.7 +/- 0.9 cal mol(-1) K(-1)) is identical with that of AdoCbl (13.5 +/- 0.7 cal mol(-1) K(-1)) but that the enthalpy of activation (34.8 kcal mol(-1)) is 1.0 +/- 0.4 kcal mol(-1) larger. The opposite effect is seen for heterolysis, where the enthalpies of activation are identical but the entropy of activation is 5 +/- 1 cal mol(-1) K(-1) less negative for Ado(Im)Cbl. Extrapolation to 37 degrees C provides a rate constant for Ado(Im)Cbl homolysis of 2.1 x 10(-9) s(-1), 4.3-fold smaller than for AdoCbl. Combined with earlier results for the enzyme-induced homolysis of Ado(Im)Cbl by the ribonucleoside triphosphate reductase from Lactobacillus leichmannii, the catalytic efficiency of the enzyme for homolysis of Ado(Im)Cbl at 37 degrees C can be calculated to be 4.0 x 10(8), 3.8-fold, or 0.8 kcal mol(-1), smaller than for AdoCbl. Thus, the bulky Bzm ligand makes at best a <1 kcal mol(-1) contribution to the enzymatic activation of coenzyme B(12).     

Kinetic and equilibrium study on formic acid decomposition in relation to the water-gas-shift reaction

Kinetics and equilibrium are studied on the hydrothermal decarbonylation and decarboxylation of formic acid, the intermediate of the water-gas-shift (WGS) reaction, in hot water at temperatures of 170-330 degrees C, to understand and control the hydrothermal WGS reaction. (1)H and (13)C NMR spectroscopy is applied to analyze as a function of time the quenched reaction mixtures in both the liquid and gas phases. Only the decarbonylation is catalyzed by HCl, and the reaction is first-order with respect to both [H(+)] and [HCOOH]. Consequently, the reaction without HCl is first and a half (1.5) order due to the unsuppressed ionization of formic acid. The HCl-accelerated decarbonylation path can thus be separated in time from the decarboxylation. The rate and equilibrium constants for the decarbonylation are determined separately by using the Henry constant (gas solubility data) for carbon monoxide in hot water. The rate constant for the decarbonylation is 1.5 x 10(-5), 2.0 x 10(-4), 3.7 x 10(-3), and 6.3 x 10(-2) mol(-1) kg s(-1), respectively, at 170, 200, 240, and 280 degrees C on the liquid branch of the saturation curve. The Arrhenius plot of the decarbonylation is linear and gives the activation energy as 146 +/- 3 kJ mol(-1). The equilibrium constant K(CO) = [CO]/[HCOOH] is 0.15, 0.33, 0.80, and 4.2, respectively, at 170, 200, 240, and 280 degrees C. The van't Hoff plot results in the enthalpy change of DeltaH = 58 +/- 6 kJ mol(-1). The decarboxylation rate is also measured at 240-330 degrees C in both acidic and basic conditions. The rate is weakly dependent on the solution pH and is of the order of 10(-4) mol kg(-1) s(-1) at 330 degrees C. Furthermore, the equilibrium constant K(CO2) = [CO(2)][H(2)]/[HCOOH] is estimated to be 1.0 x10(2) mol kg(-1) at 330 degrees C.     

Equilibrium and Kinetics of Bromine Hydrolysis

Equilibrium constants for bromine hydrolysis, K(1) = [HOBr][H(+)][Br(-)]/[Br(2)(aq)], are determined as a function of ionic strength (&mgr;) at 25.0 degrees C and as a function of temperature at &mgr; approximately 0 M. At &mgr; approximately 0 M and 25.0 degrees C, K(1) = (3.5 +/- 0.1) x 10(-)(9) M(2) and DeltaH degrees = 62 +/- 1 kJ mol(-)(1). At &mgr; = 0.50 M and 25.0 degrees C, K(1) = (6.1 +/- 0.1) x 10(-)(9) M(2) and the rate constant (k(-)(1)) for the reverse reaction of HOBr + H(+) + Br(-) equals (1.6 +/- 0.2) x 10(10) M(-)(2) s(-)(1). This reaction is general-acid-assisted with a Br?nsted alpha value of 0.2. The corresponding Br(2)(aq) hydrolysis rate constant, k(1), equals 97 s(-)(1), and the reaction is general-base-assisted (beta = 0.8).     

Homolysis of the peroxynitrite anion detected with permanganate

The reaction of peroxynitrite with violet-colored MnO4- leads to the formation of green MnO42-. The rate constant for the reaction at pH 11.7, 5.5 mM ionic strength, and 25 degrees C, 0.020 +/- 0.001 s(-1), is independent of the MnO4- concentration; homolysis of ONOO- to NO* and O2*- is the rate-determining step. Both NO* and O2*- react with MnO4- with rate constants of (3.5 +/- 0.7) x 10(6) M(-1)s(-1) and (5.7 +/- 0.9) x 10(5) M(-1)s(-1), respectively. The activation volume and activation energy for breaking the N-O bond are 12.6 +/- 0.8 cm(3)mol(-1) and 102 +/- 2 kJ mol(-1), respectively. In combination with the known standard Gibbs energies of formation of NO* and O2*-, the rate of the reaction of NO* and O2*-, and the pKa of ONOOH, we find a standard Gibbs energy of formation of ONOO- of +68 +/- 1 kJ mol(-1), and of ONOOH of +31 +/- 1 kJ mol(-1).     

Kinetics and mechanism of hydrolysis of a model phosphate diester by [Cu(Me3tacn)(OH2)2]2+ (Me3tacn = 1,4,7-trimethyl-1,4,7-triazacyclononane)

The kinetics of hydrolysis of bis(p-nitrophenyl)phosphate (BNPP) by [Cu(Me3tacn)(OH2)2]2+ has been studied by spectrophotometrical monitoring of the release of the p-nitrophenylate ion from BNPP. The reaction was followed for up to 8000 min at constant BNPP concentration (15 microM) and ionic strength (0.15 M) and variable concentration of complex (1.0-7.5 mM) and temperature (42.5-65.0 degrees C). Biphasic kinetic traces were observed, indicating that the complex promotes the cleavage of BNPP to NPP [(p-nitrophenyl)phosphate] and then cleavage of the latter to phosphate, the two processes differing in rate by 50-100-fold. Analysis of the more amenable cleavage of BNPP revealed that the rate of BNPP cleavage is among the highest measured for mononuclear copper(II) complexes and is slightly higher than that reported for the close analogue [Cu(iPr3tacn)(OH2)2]2+. Detailed analysis required the determination of the pKa for [Cu(Me3tacn)(OH2)2]2+ and the constant for the dimerization of the conjugate base to [(Me3tacn)Cu(OH)2Cu(Me3tacn)]2+ (Kdim). Thermodynamic parameters derived from spectrophotometric pH titration and the analysis of the kinetic data were in reasonable agreement. Second-order rate constants for cleavage of BNPP by [Cu(Me3tacn)(OH2)(OH)]+ and associated activation parameters were obtained from initial rate analysis (k = 0.065 M(-1) s(-1) at 50.0 degrees C, deltaH = 56+/-6 kJ mol(-1), deltaS = -95+/-18 J K(-1) mol(-1)) and biphasic kinetic analysis (k = 0.14 M(-1) s(-1) at 50.0 degrees C, deltaH = 55+/-6 kJ mol(-1), deltaS = -92+/-20 J K(-1) mol(-1)). The negative entropy of activation is consistent with a concerted mechanism with considerable associative character. The complex was found to catalyze the cleavage of BNPP with turnover rates of up to 1 per day. Although these turnover rates can be considered low from an application point of view, the ability of the complexes to catalyze phosphate ester cleavage is clearly demonstrated.     

A detailed mechanistic study of the substitution behavior of an unusual seven-coordinate iron(III) complex in aqueous solution

A detailed mechanistic study of the substitution behavior of a 3d metal heptacoordinate complex, with a rare pentagonal-bipyramidal structure, was undertaken to resolve the solution chemistry of this system. The kinetics of the complex-formation reaction of [Fe(dapsox)(H(2)O)(2)]ClO(4) (H(2)dapsox = 2,6-diacetylpyridine-bis(semioxamazide)) with thiocyanate was studied as a function of thiocyanate concentration, pH, temperature, and pressure. The reaction proceeds in two steps, which are both base-catalyzed due to the formation of an aqua-hydroxo complex (pK(a1) = 5.78 +/- 0.04 and pK(a2) = 9.45 +/- 0.06 at 25 degrees C). Thiocyanate ions displace the first coordinated water molecule in a fast step, followed by a slower reaction in which the second thiocyanate ion coordinates trans to the N-bonded thiocyanate. At 25 degrees C and pH <4.5, only the first reaction step can be observed, and the kinetic parameters (pH 2.5: k(f(I)) = 2.6 +/- 0.1 M(-1) s(-1), DeltaH(#)(f(I)) = 62 +/- 3 kJ mol(-1), DeltaS(#)(f(I)) = -30 +/- 10 J K(-1) mol(-1), and DeltaV(#)(f(I)) = -2.5 +/- 0.2 cm(3) mol(-1)) suggest the operation of an I(a) mechanism. In the pH range 2.5 to 5.2 this reaction step involves the participation of both the diaqua and aqua-hydroxo complexes, for which the complex-formation rate constants were found to be 2.19 +/- 0.06 and 1172 +/- 22 M(-1) s(-1) at 25 degrees C, respectively. The more labile aqua-hydroxo complex is suggested to follow an I(d) or D substitution mechanism on the basis of the reported kinetic data. At pH > or =4.5, the second substitution step also can be monitored (pH 5.5 and 25 degrees C: k(f(II)) = 21.1 +/- 0.5 M(-1) s(-1), DeltaH(#)(f(II)) = 60 +/- 2 kJ mol(-1), DeltaS(#)(f(II)) = -19 +/- 6 J K(-1) mol(-1), and DeltaV(#)(f(II)) = +8.8 +/- 0.3 cm(3) mol(-1)), for which an I(d) or D mechanism is suggested. The results are discussed in terms of known structural parameters and in comparison to relevant structural and kinetic data from the literature.     

Kinetics of manganese(III) acetate in acetic acid: generation of Mn(III) with Co(III), Ce(IV), and dibromide radicals; reactions of Mn(III) with Mn(II), Co(II), hydrogen bromide,and alkali bromides

The reaction of cobalt(III) acetate with excess manganese(II) acetate in acetic acid occurs in two stages, since the two forms Co(IIIc) and Co(IIIs) are not rapidly equilibrated and thus react independently. The rate constants at 24.5 degrees C are kc = 37.1 +/- 0.6 L mol-1 s-1 and ks = 6.8 +/- 0.2 L mol-1 s-1 at 24.5 degrees C in glacial acetic acid. The Mn(III) produced forms a dinuclear complex with the excess of Mn(II). This was studied independently and is characterized by the rate constant (3.43 +/- 0.01) x 10(2) L mol-1 s-1 at 24.5 degrees C. A similar interaction between Mn(III) and Co(II) is substantially slower, with k = (3.73 +/- 0.05) x 10(-1) L mol-1 s-1 at 24.5 degrees C. Mn(II) is also oxidized by Ce(IV), according to the rate law -d[Ce(IV)]/dt = k[Mn(II)]2[Ce(IV)], where k = (6.0 +/- 0.2) x 10(4) L2 mol-2 s-1. The reaction between Mn(II) and HBr2., believed to be involved in the mechanism by which Mn(III) oxidizes HBr, was studied by laser photolysis; the rate constant is (1.48 +/- 0.04) x 10(8) L mol-1 s-1 at approximately 23 degrees C in HOAc. Oxidation of Co(II) by HBr2. has the rate constant (3.0 +/- 0.1) x 10(7) L mol-1 s-1. The oxidation of HBr by Mn(III) is second order with respect to [HBr]; k = (4.10 +/- 0.08) x 10(5) L2 mol-2 s-1 at 4.5 degrees C in 10% aqueous HOAc. Similar reactions with alkali metal bromides were studied; their rate constants are 17-23 times smaller. This noncomplementary reaction is believed to follow that rate law so that HBr2. and not Br. (higher in Gibbs energy by 0.3 V) can serve as the intermediate. The analysis of the reaction steps then requires that the oxidation of HBr2. to Br2 by Mn(III) be diffusion controlled, which is consistent with the driving force and seemingly minor reorganization.     

The analytical kinetics of the titanium(III)-perchlorate reaction-I Homogeneous reaction kinetics

A spectrophotometric investigation has been made of the analytically relevant kinetics of the titanium(III)-perchlorate reaction in chloride and sulphate media. Sulphate media give better and more reproducible results. The reaction in sulphate medium is first-order in titanium(III) and hydrogen ion, but of fractional order in perchlorate. The pseudo third-order rate constant k(3)' for the rate equation has a value of 4.22 +/- 0.15 l(2) mol(-2) s(-1) at 49 degrees C. The energy of activation in sulphate medium is 84 +/- 4 kJ mol(-1), and in chloride medium is 80 +/- 12 kJ mol(-1). Small amounts of chloride m a sulphate medium, or of sulphate in a chloride medium, retard the reaction. The basis has been laid for a rate-measurement method for determination of perchlorate at low concentrations.     

Temperature dependence of the rate coefficients for the reactions of Br atoms with dimethyl ether and diethyl ether

The rate constants for the reactions of atomic bromine with dimethyl ether and diethyl ether were measured from approximately 300 to 350 K using the relative rate method. Both isooctane and isobutane were used as the reference reactants, and the rate constants for the reactions of these hydrocarbons were measured relative to each other over the same temperature range. The kinetic measurements were made by photolysis of dilute mixtures of bromine, the reference reactant, and the test reactant in mixtures of argon and oxygen at a total pressure of 1 atm. The resulting ratios of rate constants were combined with the absolute rate constant as a function of temperature for the reference reaction of Br with isobutane to calculate absolute rate constants for the reactions of Br with isooctane, dimethyl ether, and diethyl ether. The absolute rate constant, in the units cm3 molecule(-1) s(-1), for the reaction of Br with dimethyl ether was given by k = (3.8 +/- 2.4) x 10(-10) exp(-(3.54 +/- 0.21) x 10(3)/T) while for the reaction of Br with diethyl ether the rate constant is given by k = (2.8 +/- 2.7) x 10(-10) exp(-(2.44 +/- 0.32) x 10(3)/T). On the same basis, the rate constant for the reaction of Br with isooctane is given by k = (3.34 +/- 0.59) x 10(-12) exp(-(1.80 +/- 0.11) x 10(3)/T). In each case, the activation energy of the reaction is significantly smaller than the endothermicity of the reaction. This is discussed in terms of a complex mechanism for these reactions.     

Effect of microwave dielectric heating on intraparticle diffusion in reversed-phase liquid chromatography

The influence of microwave (MW) irradiation on the mass transfer kinetics in reversed-phase liquid chromatography (RPLC) was studied by placing a column in a microwave oven and measuring the incremental change in the temperature of the column effluent stream at various microwave energies and mobile phase compositions. The microwave energy dissipated in the column was set between 15 and 200 W and the mobile phase composition used varied from 100 to 70, 50, and 10% methanol in water at 1.2 mL/min. At all the mobile phase compositions considered, the effluent temperature increased with increasing microwave energy. At 70% methanol, the mobile phase flow rate was set at 1.2, 2.0, and 2.8 mL/min. At 1.2 mL/min, the effluent temperatures at the lowest (15 W) and highest (200 W) microwave energy inputs were 25 +/- 1 degrees C and 41 +/- 1 degrees C for pure methanol, 25 +/- 1 degrees C and 48 +/- 1 degrees C for 70% methanol, 25 +/- 1 degrees C and 50 +/- 1 degrees C for 50% methanol, and, 25 +/- 1 degrees C and 52 +/- 1 degrees C for 10% methanol, respectively. With 70% methanol and microwave energy inputs of 15, 30, and 50 W, the effluent temperature did not change with increasing flow rate; a considerable change was observed at 100, 150, and 200 W between 1.2 and 2.0 mL/min and none between 2.0 and 2.8 mL/min. Chromatographic elution band profiles of propylbenzene were recorded under linear conditions, in 70% methanol solutions, for microwave energy inputs of 0, 15 and 30 W, at constant temperature. The intraparticle diffusion coefficient, De, under microwave irradiation was ca. 20% higher than without irradiation. These preliminary results suggest that microwave irradiation may have a considerable influence on intraparticle diffusion in RPLC.     

Temperature dependence of the heterogeneous reaction of carbonyl sulfide on magnesium oxide

The experimental determination of rate constants for atmospheric reactions and how these rate constants vary with temperature remain a crucially important part of atmosphere science. In this study, the temperature dependence of the heterogeneous reaction of carbonyl sulfide (COS) on magnesium oxide (MgO) has been investigated using a Knudsen cell reactor and a temperature-programmed reaction apparatus. We found that the adsorption and the heterogeneous reaction are sensitive to temperature. The initial uptake coefficients (gammat(Ini)) of COS on MgO decrease from 1.07 +/- 0.71 x 10-6 to 4.84 +/- 0.60 x 10-7 with the increasing of temperature from 228 to 300 K, and the steady state uptake coefficients (gammat(SS)) increase from 5.31 +/- 0.06 x 10-8 to 1.68 +/- 0.41 x 10-7 with the increasing of temperature from 240 to 300 K. The desorption rate constants (kdes) were also found to increase slightly with the enhancement of temperature. The empirical formula between the uptake coefficients, desorption rate constants and temperature described in the form of Arrhenius expression were obtained. The activation energies for the heterogeneous reaction and desorption of COS on MgO were measured to be 11.02 +/- 0.34 kJ.mol-1 and 6.30 +/- 0.81 kJ.mol-1, respectively. The results demonstrate that the initial uptake of COS on MgO is mainly contributed by an adsorption process and the steady state uptake is due to a catalytic reaction. The environmental implication was also discussed.     

The protonated Schiff base of halorhodopsin from Natronobacterium pharaonis is hydrolyzed at elevated temperatures

Halorhodopsin from Natronobacterium pharaonis (pHR) is a light-driven chloride pump in which photoisomerzation of a retinal chromophore triggers a photocycle which leads to a chloride anion transport across the plasma membrane. Similarly to other retinal proteins the protonated Schiff base (PSB), which covalently links the retinal to the protein, does not experience hydrolysis reaction at room temperature even though several water molecules are located in the protonated Schiff base (PSB) vicinity. In the present studies we have revealed that in contrast to other studied archaeal rhodopsins, temperature increase to about 70 degrees C hydrolyses the PSB linkage of pHR. The rate of the reaction is affected by Cl-concentration and reveals an anion binding site (in addition to the Cl- in the SB vicinity) with a binding constant of 100mM (measured at 70 degrees C). We suggest that this binding site is located on the extracellular side and its possible role in the Cl-pumping mechanism is discussed. The rate of the hydrolysis reaction is affected by the nature of the anion bound to pHR. Substitution of the Cl- anion by Br-, I- and SCN- exhibits similar behavior to that of CI- in the region of 100mM but higher concentrations are needed for N3-, HCOO- and NO2-to achieve similar behavior. Steady state pigment illumination accelerates the reaction and reduces the energy of activation and the frequency factor. Adjusting the sample temperature to 25 degrees C following the hydrolysis reaction led to about 80% pigment recovery. However, the newly reformed pigment is different from the mother pigment and has different characteristics. It is concluded that the apo-membrane adopts a modified conformation and/or aggregated state which rebinds the retinal to give a new conformation of the pHR pigment.     

Kinetics and activation parameter analysis for the prebiotic oligocytidylate formation on Na(+)-montmorillonite at 0-100 degrees C

The kinetic analysis of the temperature dependence of the formation of oligocytidylate (oligo(C)) from the 5'-monophosphorimidazolide moiety of cytidine (ImpC) in the presence of Na (+)-montmorillonite (Na (+)-Mont) catalyst has been carried out at 0-100 degrees C. The rate constants for the formation of oligo(C), hydrolysis of ImpC with and without Na (+)-Mont and degradation of oligo(C) were determined. The apparent activation parameters were 30.8 +/- 3.9 kJ mol (-1) ( Ea), 28.3 +/- 4.0 kJ mol (-1) (Delta H++), and -231 +/- 13 J mol (-1) K (-1) (Delta S++) for the formation of the 2-mer; 45.6 +/- 2.9 kJ mol (-1) ( Ea), 43.0 +/- 3.0 kJ mol (-1) (Delta H++), -164 +/- 10 J mol (-1) K (-1) (Delta S++) for the 3-mer; and 45.2 +/- 0.6 kJ mol (-1) ( Ea), 42.7 +/- 0.7 kJ mol (-1) (Delta H++), -159 +/- 2 J mol (-1) K (-1) (Delta S++) for the 4-mer in the presence of Na (+)-Mont. An increasing trend for the rate constants for the formation of oligo(C) in the order 2-mer < 3-mer <4-mer was observed at high temperatures, which is consistent with that observed at low temperatures. These analyses implied for the first time that the associate formation between an activated nucleotide monomer and an elongating oligonucleotide prior to the phosphodiester bond formation during the elongation of an oligonucleotide on a clay surface would be based on the interaction between the two reactants at the phosphoester and/or ribose moieties rather than at the nucleotide bases. The hydrolysis rate of ImpC at 25-100 degrees C was 5.3-10.6 times greater in the presence of Na (+)-Mont than in its absence. Although the degradation of oligo(C) in the presence of Na (+)-Mont was slower than the formation of the 3-mer and longer oligo(C) on Na (+)-Mont, its yield decreased with temperature. This is mainly because the ratios of the rate constant of the 2-mer formation to those of ImpC hydrolysis and the 3-mer and 4-mer formation decrease with an increase in temperature, which is attributed to the enthalpy and entropy changes for the formation of the 2-mer. This trend resembles the case of the template-directed formation of oligo(G) on a poly(C) template but is different from the Pb (2+)-ion-catalyzed oligo(C) formation. According to the kinetics and activation parameter analyses regarding the clay reaction and other prebiotic polymerase models, the possible pathways for the oligonucleotide formation are discussed and compared.     

The first experimental test of the hypothesis that enzymes have evolved to enhance hydrogen tunneling

The literature hypothesis that "the optimization of enzyme catalysis may entail the evolutionary implementation of chemical strategies that increase the probability of quantum-mechanical tunneling" is experimentally tested herein for the first time. The system employed is the key to being able to provide this first experimental test of the "enhanced hydrogen tunneling" hypothesis, one that requires a comparison of the three criteria diagnostic of tunneling (vide infra) for the same, or nearly the same, reaction with and without the enzyme. Specifically, studied herein are the adenosylcobalamin (AdoCbl, also known as coenzyme B(12))-dependent diol dehydratase model reactions of (i). H(D)(*) atom abstraction from ethylene glycol-d(0) and ethylene glycol-d(4) solvent by 5'-deoxyadenosyl radical (Ado(*)) and (ii.) the same H(*) abstraction reactions by the 8-methoxy-5'-deoxyadenosyl radical (8-MeOAdo(*)). The Ado(*) and 8-MeOAdo(*) radicals are generated by Co-C thermolysis of their respective precursors, AdoCbl and 8-MeOAdoCbl. Deuterium kinetic isotope effects (KIEs) of the H(*)(D(*)) abstraction reactions from ethylene glycol have been measured over a temperature range of 80-120 degrees C: KIE = 12.4 +/- 1.1 at 80 degrees C for Ado(*) and KIE = 12.5 +/- 0.9 at 80 degrees C for 8-MeOAdo(*) (values ca. 2-fold that of the predicted maximum primary times secondary ground-state zero-point energy (GS-ZPE) KIE of 6.4 at 80 degrees C). From the temperature dependence of the KIEs, zero-point activation energy differences ([E(D) - E(H)]) of 3.0 +/- 0.3 kcal mol(-)(1) for Ado(*) and 2.1 +/- 0.6 kcal mol(-)(1) for 8-MeOAdo(*) have been obtained, both of which are significantly larger than the nontunneling, zero-point energy only maximum of 1.2 kcal mol(-)(1). Pre-exponential factor ratios (A(H)/A(D)) of 0.16 +/- 0.07 for Ado(*) and 0.5 +/- 0.4 for 8-MeOAdo(*) are observed, both of which are significantly less than the 0.7 minimum for nontunneling behavior. The data provide strong evidence for the expected quantum mechanical tunneling in the Ado(*) and 8-MeOAdo(*)-mediated H(*) abstraction reactions from ethylene glycol. More importantly, a comparison of these enzyme-free tunneling data to the same KIE, (E(D) - E(H)) and A(H)/A(D) data for a closely related, Ado(*)-mediated H(*) abstraction reaction from a primary CH(3)- group in AdoCbl-dependent methylmalonyl-CoA mutase shows the enzymic and enzyme-free data sets are identical within experimental error. The Occam's Razor conclusion is that at least this adenosylcobalamin-dependent enzyme has not evolved to enhance quantum mechanical tunneling, at least within the present error bars. Instead, this B(12)-dependent enzyme simply exploits the identical level of quantum mechanical tunneling that is available in the enzyme-free, solution-based H(*) abstraction reaction. The results also require a similar, if not identical, barrier width and height within experimental error for the H(*) abstraction both within, and outside of, the enzyme.     

Kinetics and mechanism of the oxygenation of potassium flavonolate. Evidence for an electron transfer mechanism

The oxygenation of the potassium salt of flavonol (flaH) in absolute DMF leads to potassium O-benzoylsalicylate and carbon monoxide in 95% yield at 40 degrees C. Kinetic measurements resulted in the rate law -d[flaK]/dt = k(2)[flaK][O(2)]. The rate constant, activation enthalpy, and entropy at 313.16 K are as follows: k(2)/M(-)(1) s(-1) = (3.28 +/- 0.10) x 10(-1), DeltaH()/kJ mol(-1) = 29 +/- 2, DeltaS/J mol(-1) K(-1) = -161 +/- 6. The reaction fits a Hammett linear free energy relationship for 4'-substituted flavonols, and electron-releasing groups make the oxygenation reaction faster. The anodic oxidation wave potentials E(a) of the 4'-substituted flavonolates correlate well with reaction rates. At more negative E(a) values faster reaction rates were observed. EPR spectrum of the reaction mixture (g = 2.0038, dH = 1.8 G, a(H) = 0.9 G) showed the presence of flavonoxyl radical as a result of a SET from the flavonolate to dioxygen.