Vibrational assignment of the normal modes of 2-phenyl-4-(4-methoxy benzylidene)-2-oxazolin-5-one via FTIR and Raman spectra, and ab inito calculations

Raman and FTIR spectra of 2-phenyl-4-(4-methoxy benzylidene)-2-oxazolin-5-one were recorded in the regions, 100-3300 and 400-4000 cm(-1), respectively. Vibrational frequencies and intensities of the fundamental modes of this hetrocyclic organic molecule were computed using ab initio as well as AM1 semiempirical molecular orbital methods. Ab initio calculations were carried out with basis set up to RHF/6-311G. Conformational studies regarding the effect of moving the methoxy group in the 2-phenyl-4-(4-methoxy benzylidene)-2-oxazolin-5-one molecule to a different position on the ring was also carried out. Observed vibrational wavenumbers were found to be mostly consistent with ab initio values. The most intense mode of vibration observed at 1250 cm(-1) in Raman spectra, also observed as a strong band in FTIR, was assigned as C-O stretching vibration in the methoxy group. Asymmetric stretching vibrations between CC and CN bonds was predicted as most intense mode by our ab initio calculation.     

Laser Raman spectroscopy of THF clathrate hydrate in the temperature range 90-300 K

In situ Raman and Fourier transform infrared (FTIR-NIR) spectroscopic studies on tetrahydrofuran (THF-C(4)H(8)O) clathrate hydrate (CH) were reported. The Raman results in lattice (64 cm(-1)), ring breathing and C-H stretching mode regions are in conformity with earlier reports, while the FTIR (NIR) studies in second order mode region were reported for the first time. Comparison of the results indicate that the band assigned to ring breathing mode around 922 cm(-1) (in Raman) and corresponding second order mode in NIR around 4295 cm(-1) broadens and shifts in enclathrated THF. The ring breathing mode at lower temperatures (T<120 K) is highly asymmetric and splits into two and are due to different host-guest interactions at lower temperatures.     

Infrared study of HDTMA+ intercalated montmorillonite

In this paper, FTIR spectroscopy using attenuated total reflection (ATR) and KBr pressed disk techniques has been used to characterize sorbed water and HDTMA+ in organo-clay. Sorbed water content decreases with the intercalation of HDTMA+. With the decrease of the sorbed water content, the position of the nu2 mode shifts to higher frequency dramatically while the stretching vibration shifts to lower frequency slightly, indicating that H2O is less strongly hydrogen bonded. This might be resulted from the polarization of H2O molecules by the changeable cations and HDTMA+. FTIR spectra show that both antisymmetric and symmetric CH2 stretching absorption bands shift to low frequencies with increase of amine concentration within the galleries of montmorillonite, elucidating the increase of ordered conformation. Furthermore, the present study demonstrates that the antisymmetric CH2 stretching mode is more sensitive to the conformational ordering than the symmetric stretching mode. When KBr pressed disk technique used, two well resolved absorption bands at 730 and 720 cm(-1), and at 1473 and 1463 cm(-1), corresponding to the methylene scissoring and rocking modes, respectively, could be observed in FTIR spectra of organo-clays with relative higher concentration of surfactant. However, the FTIR spectra using ATR technique only display singlets and they are independent of amine concentration and chain conformation. Our present study demonstrates that FTIR spectroscopy using KBr pressed disk technique is more suitable to probe the conformational ordering of surfactant in organo-clays than that suing ATR technique does.     

Nature of water in nacre: a 2D Fourier transform infrared spectroscopic study

In this work, the interactions of aragonite and organic matrix in nacre with water are investigated using two-dimensional (2D) Fourier transform infrared (FTIR) spectroscopy. The 2D-FTIR analysis revealed four bands in the OH stretching region at around 3550, 3445, 3272 and 3074 cm(-1). Two additional bands were found at around 3616 and 3282 cm(-1) after deconvolution of the nacre spectrum. The bands at around 3616 and 3550 cm(-1) are assigned to asymmetric and symmetric OH stretching of partially hydrogen bonded water molecules. The bands at around 3445 and 3272 cm(-1) are assigned to asymmetric and symmetric OH stretching of water molecules fully hydrogen bonded with surrounding water molecules. Presence of above bands in the nacre spectrum suggests that water, in form of clusters, is present in protein matrix and aragonite pores. Water may also hydrogen bond with the organic matrix. The bands observed at 3282 and 3074 cm(-1) are assigned to asymmetric and symmetric OH stretching of water molecules, chemisorbed on surfaces of aragonite platelets. Polarization experiments suggest that H-O-H plane of water molecules is along to c-axis of aragonite platelets.     

A vibrational spectroscopic study of the mixed anion mineral sanjuanite Al2(PO4)(SO4)(OH)·9H2O

The mineral sanjuanite Al2(PO4)(SO4)(OH)·9H2O has been characterised by Raman spectroscopy complimented by infrared spectroscopy. The mineral is characterised by an intense Raman band at 984 cm(-1), assigned to the (PO4)3- ν1 symmetric stretching mode. A shoulder band at 1037 cm(-1) is attributed to the (SO4)2- ν1 symmetric stretching mode. Two Raman bands observed at 1102 and 1148 cm(-1) are assigned to (PO4)3- and (SO4)2- ν3 antisymmetric stretching modes. Multiple bands provide evidence for the reduction in symmetry of both anions. This concept is supported by the multiple sulphate and phosphate bending modes. Raman spectroscopy shows that there are more than one non-equivalent water molecules in the sanjuanite structure. There is evidence that structural disorder exists, shown by the complex set of overlapping bands in the Raman and infrared spectra. At least two types of water are identified with different hydrogen bond strengths. The involvement of water in the sanjuanite structure is essential for the mineral stability.     

Raman microscopy of autunite minerals at liquid nitrogen temperature

Uranyl micas are based upon (UO(2)PO(4))(-) units in layered structures with hydrated counter cations between the interlayers. Uranyl micas also known as the autunite minerals are of general formula M(UO2)2(XO4)2 x 8-12H2O where M may be Ba, Ca, Cu, Fe(2+), Mg, Mn(2+) or 1/2(HA1) and X is As or P. The structures of these minerals have been studied using Raman microscopy at 298 and 77K. Six hydroxyl stretching bands are observed of which three are highly polarised. The hydroxyl stretching vibrations are related to the strength of hydrogen bonding of the water OH units. Bands in the Raman spectrum of autunite at 998, 842 and 820 cm(-1) are highly polarised. Low intensity band at 915 cm(-1) is attributed to the nu(3) antisymmetric stretching vibration of (UO(2))(2+) units. The band at 820 cm(-1) is attributed to the nu(1) symmetric stretching mode of the (UO(2))(2+) units. The (UO(2))(2+) bending modes are found at 295 and 222 m(-1). The presence of phosphate and arsenate anions and their isomorphic substitution are readily determined by Raman spectroscopy. The collection of Raman spectra at 77K enables excellent band separation.     

Melting behavior of poly(3-hydroxybutyrate) investigated by two-dimensional infrared correlation spectroscopy

The melting behavior of a bacterially synthesized biodegradable polymer, poly(3-hydroxybutyrate) (PHB), was investigated by using generalized two-dimensional infrared (2D IR) correlation spectroscopy. Temperature-dependent spectral variations in the regions of the C-H stretching (3100-2850 cm(-1)), C=O stretching (1800-1680 cm(-1)), and C-O-C stretching (1320-1120 cm(-1)) bands were monitored during the melting process. The asynchronous 2D correlation spectrum for the C=O stretching band region resolved two crystalline bands at 1731 and 1723 cm(-1). The intense band at 1723 cm(-1) may be due to the highly ordered crystalline part of PHB, and the weak band at 1731 cm(-1) possibly arises from the crystalline part with a less ordered structure. These crystalline bands at 1731 and 1723 cm(-1) share asynchronous cross peaks with a band at around 1740 cm(-1) assignable to the C=O band due to the amorphous component. This observation indicates that the decreases in the crystalline components do not proceed simultaneously with the increase in the amorphous component. In the 3020-2915 cm(-1) region where bands due to the asymmetric CH3 stretching and antisymmetric CH2 stretching modes are expected to appear, eight bands are identified at 3007, 2995, 2985, 2975, 2967, 2938, 2934, and 2929 cm(-1). The bands at 2985 and 2938 cm(-1) are ascribed to the amorphous part while the rest come from crystal field splitting, which is a characteristic of polymers with a helical structure.     

Raman spectroscopy of newberyite Mg(PO3OH)·3H2O: a cave mineral

Newberyite Mg(PO3OH)·3H2O is a mineral found in caves such as from Moorba Cave, Jurien Bay, Western Australia, the Skipton Lava Tubes (SW of Ballarat, Victoria, Australia) and in the Petrogale Cave (Madura, Eucla, Western Australia). Because these minerals contain oxyanions, hydroxyl units and water, the minerals lend themselves to spectroscopic analysis. Raman spectroscopy can investigate the complex paragenetic relationships existing between a number of 'cave' minerals. The intense sharp band at 982 cm(-1) is assigned to the PO4(3-)ν1 symmetric stretching mode. Low intensity Raman bands at 1152, 1263 and 1277 cm(-1) are assigned to the PO4(3-)ν3 antisymmetric stretching vibrations. Raman bands at 497 and 552 cm(-1) are attributed to the PO4(3-)ν4 bending modes. An intense Raman band for newberyite at 398 cm(-1) with a shoulder band at 413 cm(-1) is assigned to the PO4(3-)ν2 bending modes. The values for the OH stretching vibrations provide hydrogen bond distances of 2.728 ? (3267 cm(-1)), 2.781 ? (3374 cm(-1)), 2.868 ? (3479 cm(-1)), and 2.918 ? (3515 cm(-1)). Such hydrogen bond distances are typical of secondary minerals. Estimates of the hydrogen-bond distances have been made from the position of the OH stretching vibrations and show a wide range in both strong and weak bonds.     

Observation of the first hydration layer of isolated cations and anions through the FTIR-ATR difference spectra

The attenuated total reflectance-Fourier transform infrared (ATR-FTIR) difference spectra of the dilute aqueous (NH4)2SO4, Na2SO4, MgSO4, ZnSO4, NaClO4, and Mg(ClO4)2 solutions by pure water were obtained at various concentrations. In the difference spectra of aqueous (NH4)2SO4 solutions, a peak at approximately 3039 cm(-1), two shoulders at approximately 3155 and approximately 2894 cm(-1), and a peak at approximately 1445 cm(-1) were ascribed to N-H stretching and bending vibrations, respectively. A small negative peak was resolved at approximately 3660 cm(-1) in the difference spectra of (NH4)2SO4, which is the sole contribution of SO4(2-) either in the O-H stretching or in the O-H bending region. The positive peaks of the difference spectra in the O-H stretching region for Na2SO4, MgSO4, and ZnSO4 systems, which constantly appeared at approximately 3423, approximately 3136, and approximately 3103 cm(-1) respectively, were suggested to be the contribution of the interactions between metal cations (Na+, Mg2+, and Zn2+) and water molecules, especially from the first hydrated layer of the cations. In the region of 800-1200 cm(-1), the normally infrared-prohibited nu1 (SO4(2-)) band was observed as a weak peak at approximately 981 cm(-1) even at very dilute concentrations (0.10 mol dm(-3)) due to the disturbance of the water molecules hydrated with SO4(2-), even though such a feature may increasingly result from associated ions with increasing concentration. The spectra of the water molecules directly influenced by ClO4-, i.e., mostly the first layer of hydrated water, in NaClO4 and Mg(ClO4)2 solutions were obtained by subtracting the corresponding spectra of the same metal sulfate solutions at the same concentrations from the perchlorate solutions. A positive peak at approximately 3583 +/- 6 cm(-1) and a negative peak at approximately 3184 +/- 25 cm(-1) were obtained as the result of the subtraction. The positive peak was attributed to the water molecules weakly hydrogen-bonded with ClO4-, while the negative one to the reduction of water molecules with fully hydrogen-bonded five-molecule tetrahedral nearest neighbor structure on the introduction of ClO4-.     

Novel Photoinitiated Synthesis, Characterization, Thermal Kinetics, and Mechanism of Complex of Potassium Hexacyanoferrate with Imidazole

Photoinitiated substitution complex of [Fe(CN)6]4- with imidazole has been synthesized and characterized. On the basis of elemental analysis, the empirical molecular formula of the complex is K4[Fe(CN)5(C3H4N2)]·4H2O. The substitution of aquo ligand produced as a result of photoexcitation by imidazole has been confirmed by various spectroscopic thechniques like UV-Vis, FTIR, NMR, and SEM techniques. The characteristic FTIR and NMR ab- sorption peaks for different entities present support the assigned formul...     

Synthesis and Crystal Structure of a New Imidazole Coordinated Octamolybdate Compound

1 INTRODUCTION Polyoxometallates are of great interest not only for their structural variety but also for their un- expected properties[1, 2]. These inorganic anions had been widely investigated in catalysis, biology, me- dicine, magnetochemistry and materials science[3～6]. Especially, the studies on the organic ligands coor- dinated by polyoxometallates might help to under- stand the catalytic mechanism of polyoxometallates. In recent years, several octamolybdates containing organic l…     

Structural inhomogeneity of interfacial water at lipid monolayers revealed by surface-specific vibrational pump-probe spectroscopy

We report vibrational lifetime measurements of the OH stretch vibration of interfacial water in contact with lipid monolayers, using time-resolved vibrational sum frequency (VSF) spectroscopy. The dynamics of water in contact with four different lipids are reported and are characterized by vibrational relaxation rates measured at 3200, 3300, 3400, and 3500 cm(-1). We observe that the water molecules with an OH frequency ranging from 3300 to 3500 cm(-1) all show vibrational relaxation with a time constant of T(1) = 180 ± 35 fs, similar to what is found for bulk water. Water molecules with OH groups near 3200 cm(-1) show distinctly faster relaxation dynamics, with T(1) < 80 fs. We successfully model the data by describing the interfacial water containing two distinct subensembles in which spectral diffusion is, respectively, rapid (3300-3500 cm(-1)) and absent (3200 cm(-1)). We discuss the potential biological implications of the presence of the strongly hydrogen-bonded, rapidly relaxing water molecules at 3200 cm(-1) that are decoupled from the bulk water system.     

Spectroelectrochemical examination of the interaction between bacterial cells and gold electrodes

The interaction between bacterial cells of Pseudomonas fluorescens (ATCC 17552) and gold electrodes was analyzed by cyclic voltammetry (CV) and attenuated total reflection-surface-enhanced infrared absorption spectroscopy (ATR-SEIRAS). The voltammetric evaluation of cell adsorption showed a decrease in the double-layer capacitance of polyoriented single-crystal gold electrodes with cell adhesion. As followed by IR spectroscopy in the ATR configuration, the adsorption of bacterial cells onto thin-film gold electrodes was mainly indicated by the increase in intensity with time of amide I and amide II protein-related bands at 1664 and 1549 cm(-1), respectively. Bands at 1448 and 2900 cm(-1) corresponding to the scissoring and the stretching bands of CH2 were also detected, together with a minor peak at 1407 cm(-1) due to the vs COO- stretching. Weak signals at 1237 cm(-1) were due to amide III, and a broad band between 1100 and 1200 cm(-1) indicated the presence of alcohol groups. Bacteria were found to displace water molecules and anions coadsorbed on the surface in order to interact with the electrode intimately. This fact was evidenced in the SEIRAS spectra by the negative features appearing at 3450 and 3575 cm-1, corresponding to interfacial water directly interacting with the electrode and water associated with chloride ions adsorbed on the electrode, respectively. Experiments in deuterated water confirmed these assignments and allowed a better estimation of amide absorption bands. In CV experiments, an oxidation process was observed at potentials higher than 0.4 V that was dependent on the exposure time of electrodes in concentrated bacterial suspensions. Adsorbed bacterial cells were found to get closer to the gold surface during oxidation, as indicated by the concomitant increment in the main IR bacterial signals including amide I, a sharp band at 1240 cm(-1), and a broad one at 1120 cm(-1) related to phosphate groups in the bacterial membranes. It is proposed to be due to the oxidation of lipopolysaccharides on the outermost bacterial surface.     

Raman and infrared spectroscopy of the manganese arsenate mineral allactite

The mineral allactite [Mn(7)(AsO(4))(2)(OH)(8)] is a basic manganese arsenate which is highly pleochroic. The use of the 633 nm excitation line enables quality spectra of to be obtained irrespective of the crystal orientation. The mineral is characterised by a set of sharp bands in the 770-885 cm(-1) region. Intense and sharp Raman bands are observed at 883, 858, 834, 827, 808 and 779 cm(-1). Collecting the spectral data at 77K enabled better band separation with narrower bandwidths. The observation of multiple AsO(4) stretching bands indicates the non-equivalence of the arsenate anions in the allactite structure. In comparison the infrared spectrum shows a broad spectral profile with a series of difficult to define overlapping bands. The low wavenumber region sets of bands which are assigned to the nu(2) modes (361 and 359 cm(-1)), the nu(4) modes (471, 452 and 422 cm(-1)), AsO stretching vibrations at 331 and 324 cm(-1), and bands at 289 and 271 cm(-1) which may be ascribed to MnO stretching modes. The observation of multiple bands shows the loss of symmetry of the AsO(4) units and the non-equivalence of these units in the allactite structure. The study shows that highly pleochroic minerals can be studied by Raman spectroscopy.     

Crystal, molecular and electronic structure of N,N'-diphenyl-N,N'-bis(2,4-dimethylphenyl)-(1,1'-biphenyl)-4,4'-diamine and the corresponding radical cation

Oxidation of N,N'-diphenyl-N,N'-bis(3-methylphenyl)-(1,1'-biphenyl)-4,4'-diamine (TPD, 1 a) and N,N'-diphenyl-N,N'-bis(2,4-dimethylphenyl)-(1,1'-biphenyl)-4,4'-diamine (1 b) with SbCl(5) affords the corresponding radical cations quantitatively. The crystal and molecular structure of 1 b and [1 b]SbCl(6), the first tetraphenyl benzidene derivatives to be characterised crystallographically in both the neutral and radical cation states, reveal molecular parameters in agreement with the predictions made on the basis of DFT studies. Analysis of the NIR transition in the radical cations [1](+) (.) allows an estimate of the electronic coupling parameter V (1 a(+) (.) 3200 cm(-1); 1 b(+) (.) 3300 cm(-1)), the reorganisation energy lambda(1 a(+) (.) 7500 cm(-1); 1 b(+) (.) 7800 cm(-1)), and the linear coupling constant l (1 a(+) (.) 3100 cm(-1); 1 b(+) (.) 2700 cm(-1)) of the symmetric mode.     

Raman spectra of gas hydrates--differences and analogies to ice 1h and (gas saturated) water

It is generally accepted that Raman spectroscopic investigations of gas hydrates provide vital information regarding the structure of the hydrate, hydrate composition and cage occupancies, but most research is focused on the vibrational spectra of the guest molecules. We show that the shape and position of the Raman signals of the host molecules (H(2)O) also contain useful additional information. In this study, Raman spectra (200-4000 cm(-1)) of (mixed) gas hydrates with variable compositions and different structures are presented. The bands in the OH stretching region (3000-3800 cm(-1)), the O-H bending region (1600-1700 cm(-1)) and the O-O hydrogen bonded stretching region (100-400 cm(-1)) are compared with the corresponding bands in Raman spectra of ice Ih and liquid water. The interpretation of the differences and similarities with respect to the crystal structure and possible interactions between guest and host molecules are presented.     

Isotopic study of new fundamentals and combination bands of linear C5, C7, and C9 in solid ar

A high yield of carbon chains has been produced by the laser ablation of carbon rods having (13)C enrichment. FTIR spectroscopy of these molecules trapped in solid Ar has resulted in the identification of two new combination bands for linear C(5) and C(9). The (ν(1) + ν(4)) combination band of linear C(5) has been observed at 3388.8 cm(-1), and comparison of (13)C isotopic shift measurements with the predictions of density functional theory calculations (DFT) at the B3LYP/cc-pVDZ level makes possible the assignment of the ν(1)(σ(g)(+)) stretching fundamental at 1946 cm(-1). Similarly, the observation of the (ν(2) + ν(7)) combination band of linear C(9) at 3471.8 cm(-1) enables the assignment of the ν(2)(σ(g)(+)) stretching fundamental at 1871 cm(-1). The third and weakest of the infrared stretching fundamentals of linear C(7), the ν(6)(σ(u)(+)) fundamental at 1100.1 cm(-1), has also been assigned.     

Diffusion and structure of water in polymers containing N-vinyl-2-pyrrolidone

Poly(N-vinyl-2-pyrrolidone) (PVP), a water-soluble polymer, is known for its excellent biocompatibility. It is generally recognized that the properties of polymers may be profoundly affected by the structure of water absorbed in them. In this study, Fourier transform infrared (FT-IR) in attenuated total reflection (ATR) and transmission mode was performed to examine the diffusion and structure of water in PVP and its copolymers. The obtained spectra were analyzed using two-dimensional (2D) IR with the aid of density functional theory (DFT) calculations. The 2D IR of time-resolved FT-IR/ATR spectra shows that type II water between 3300 and 3500 cm(-1) occurs earlier during the water absorption process, which is also demonstrated by transmission FT-IR at the initial stage of water absorption. Conversely, type II water changes last when desorption takes place. Results from DFT calculations indicate that type II water might be monomeric or dimeric water molecules interacting with a carbonyl group in the pyrrolidone moiety. Furthermore, it is found that vibrations less than 3300 cm(-1) (type I water) arise from water molecules involved in a carbonyl group interacting with more than two water molecules. It is reasonable that the transmission FT-IR spectra of film with an extra low water amount hardly show vibration bands below 3300 cm(-1); however, this region is distinct in the FT-IR/ATR spectra of fully swollen film. In addition, vibration bands between 3800 and 3500 cm(-1) (type III water) are assigned to free water or water with relatively weak hydrogen bonding, as supported by the transmission FT-IR spectra of polyacrylonitrile (PAN) and the calculation results. Therefore, the diffusion process and the structures of water in PVP and its copolymers can be successfully accessed on the basis of the 2D IR analysis and DFT calculations.     

Effects of Ions on the OH Stretching Band of Water as Revealed by ATR-IR Spectroscopy

The effects of various cations (Li⁺, Na⁺, K⁺, Rb⁺, Cs⁺, Mg²⁺, Ca²⁺, Sr²⁺, Ba²⁺, Mn²⁺, Co²⁺, and Ni²⁺) and anions (Cl^?, Br^?, I^?, \( {\text{NO}}_{3}^{ - } \) , \( {\text{ClO}}_{4}^{ - } \) , \( {\text{HCO}}_{3}^{ - } \) , and \( {\text{CO}}_{3}^{2 - } \) ) on the molar absorptivity of water in the OH stretching band region (2,600–3,800 cm^?1) were ascertained from attenuated total reflection infrared spectra of aqueous electrolyte solutions (22 in all). The OH stretching band mainly changes linearly with ion concentrations up to 2 mol·L^?1, but several specific combinations of cations and anions (Cs₂SO₄, Li₂SO₄, and MgSO₄) present different trends. That deviation is attributed to ion pair formation and cooperativity in ion hydration, which indicates that the extent of the ion–water interaction reflected by the OH stretching band of water is beyond the first solvation shell of water molecules directly surrounding the ion. The obtained dataset was then correlated with several quantitative parameters representing structural and dynamic properties of water molecules around ions: ΔG _HB, the structural entropy (S _str), the viscosity B-coefficient (B _η ), and the ionic B-coefficient of NMR relaxation (B _NMR). Results show that modification of the OH stretching band of water caused by ions has quasi-linear relations with all of these parameters. Vibrational spectroscopy can be a useful means for evaluating ion–water interaction in aqueous solutions.     

Isothermal crystallization kinetics study on aqueous solution of poly(vinyl methyl ether) by FTIR and optical microscopy method

A study on the isothermal crystallization kinetics of aqueous solution of poly (vinyl methyl ether) (PVME) was carried out by Fourier transform infrared (FTIR) and optical microscopy respectively. IR spectra of PVME solution were measured as a function of time under the isothermal crystallization conditions. With the process of crystallization, the phase of solution changes from transparent state to opaque one within around 1-2 min for 40 or 45 wt % PVME sample, the C-H symmetric stretching bands (nus(CH3)) shift to lower wave number 2823 cm(-1). The red shift of nus(CH3) absorption band was not observed in the transparent noncrystallization area. Using the temperature jump method, we determined the growth rate of ice crystal between the glass transition temperature Tg and the melting temperature Tm. At the different crystallization temperatures Tc, the different morphologies and dimension of ice crystal are also observed.