Thermal decomposition study on mixed ligand thymine complexes of divalent nickel(II) with dianions of some dicarboxylic acids

Thermal decomposition of mixed ligand thymine (2,4-dihydroxy-5-methylpyrimidine) complexes of divalent Ni(II) with aspartate, glutamate and ADA (N-2-acetamido)iminodiacetate dianions was monitored by TG, DTG and DTA analysis in static atmosphere of air. The decomposition course and steps of complexes [Ni(C₅H₆N₂O₂)(C₄H₅NO₄)²⁻(H₂O)₂]·H₂O, [Ni(C₅H₆N₂O₂)(C₅H₇NO₄)²⁻(H₂O)₂]·H₂O and [Ni(C₅H₆N₂O₂)(C₆H₈N₂O₅)²⁻(H₂O)₂]·1.5H₂O were analyzed. The final decomposition products are found to be the corresponding metal oxides. The kinetic parameters namely, activation energy (E*), enthalpy (ΔH*), entropy (ΔS*) and free energy change of decomposition (ΔG*) are calculated from the TG curves using Coats–Redfern and Horowitz–Metzger equations. The stability order found for these complexes follows the trend aspartate > ADA > glutamate.     

Cobalt(III) complexes of ethylenediamine-N,N′-di-S-isobutylacetic acid

A new optically active ONNO-type tetradentate ligand, ethylenediamine-N,N′- di-S-isobutylacetate (SS-eniba), has been synthesized. During the preparation of diaqua cobalt(III) complexes of SS-eniba, [Co(SS-eniba)(H₂O)₂]⁺, the title ligand has coordinated stereospecifically to the cobalt(III) ion to give three isomers, Δ-s-cis, Δ-uns-cis and Λ-uns-cis, which have been isolated and characterized via electronic absorption, circular dichroism (CD), and ¹H NMR spectroscopy, along with elemental analysis data. The preparation of Δ-s-cis-[Co(SS-eniba)Cl₂]⁺ and Δ-s-cis-[Co(SS-eniba)CO₃]⁺ are also reported.     

The interactions of sorbates with gallosilicates and alkali-metal exchanged gallosilicates

Structures, energetics and vibrational frequencies of the interaction of adsorbates with H-aluminosilicates (H-AlZ), H-gallosilicates (H-GaZ), alkali-metal exchanged aluminosilicates (X-AlZ) and alkali-metal exchanged gallosilicates (X-GaZ), where X being Li, Na, or K, have been carried out at B3LYP and HF levels of theory with 6-31G(d) as the basis set. The charge compensating alkali-metal ions can affect the catalytically active site (Si–O–T where T=Al or Ga) by weakening the Si–O, Al–O, and Ga–O bonds as compared to their anionic frameworks. Comparing the net stabilization energies, ΔE_NSE, of the naked alkali-metal/H₂O adducts with those of the alkali-metal exchanged zeolite/H₂O systems, the latter amounts only to about 50% of the former, which is partly due to the destabilizing role of the negative zeolitic oxygen frameworks surrounding the cations. The interaction of sorbates with the alkali-metal exchanged gallosilicates can be employed to probe the field strength inside the catalytic frameworks as indicated by the plot of the binding energy, ΔE, versus 1/R_X–Ow², with R_(X–Ow) being the distance between the cationic nucleus and the oxygen atom of the adsorbate. The IR spectra of H₂O adsorbed on Na-AlZ are calculated to be 3584, 3651, and 1686 cm⁻¹. The obtained results are in excellent agreement with the very recent experimental IR spectra of water adsorbed on Na-ZSM-5 of Zecchina et al. (J. Phys. Chem., 100 (1996) 16 484). Other important features, i.e. the correlation between Δν_OH and, ΔE, R_(X–Ow), and 1/R_X–Ow², cationic size, demonstrate that the interactions of sorbates with alkali-metal exchanged gallosilicates are well approximated by electrostatic contribution.     

Thermochemical properties of Ln(Gly)4Im(ClO4)3·nH2O (Ln = Gd, Tb, Dy, Y)

The enthalpies of dissolution in water of new ternary complexes of four late trivalent lanthanide ions Ln(Gly)₄Im(ClO₄)₃·nH₂O (Ln=Gd, Tb, Dy, Y; Gly: glycine; Im: imidazole and n=1 or 2) were measured by means of a Calvet microcalorimeter. Empirical formulae for the calculation of the enthalpies of dissolution (Δ_dissH), relative apparent molar enthalpies (Δ_dissH (app)), relative partial molar enthalpies (Δ_dissH (partial)) and enthalpies of dilution (Δ_dilH_1,2) were obtained from the experimental data of the enthalpies of dissolution of these complexes. The plot of Δ_dissH_m^Θ, Δ_dissH (app) and Δ_dissH (partial) versus the values of the ionic radius of the lanthanide element (r) showed a grouping effect of the lanthanide elements, indicating that the coordinated bond between the lanthanide ions and the ligands has some covalent character. The unknown value of the standard enthalpy of dissolution for the similar complex: Ho(Gly)₄Im(ClO₄)₃·H₂O was estimated according to the plot of Δ_dissH_m^Θ versus r.     

The estimation of the hydrophobic and electrostatic contributions to the free energy change upon cationic surfactants binding to Jack bean urease

The binding of a homologous series of n-alkyltrimethyl ammonium bromides with Jack bean urease (JBU) have been studied previously. It has been suggested that both electrostatic and hydrophobic interactions are involved in the formation of surfactant-protein complexes, but there is not any quantities analyzing method for resolution of their contributions in the process. In the present study, at first, the intrinsic Gibbs free energy of binding, ΔG_b,ν, has been calculated for these systems and the trend of variation for both binding sets have been interpreted on basis of cooperativity and hydrophobicity of surfactants. Subsequently, a novel approach has been introduced for estimation of electrostatic and hydrophobic interactions in ΔG_b,ν, by considering of this fact that ΔG_b,ν is the summation of electrostatic, ΔG_b,ν(ele), and hydrophobic, ΔG_b,ν(hyd), parts and considering this fact that just ΔG_b,ν(hyd) is a function of hydrocarbon tail length of surfactant (C_n). The results represents the higher positive rule of electrostatic interactions in binding affinity of first set and inhibiting rule of this interaction in the second binding set. The predominate driving force in the second binding set is entropy statistical effect, which arises from numerous number of binding sites in this set. A binding mechanism on basis of structural changes in JBU due to its interaction with cationic surfactants has also been proposed.     

Investigation on lanthanide binuclear complexes of 1,5-bis-(1′-phenyl-3′-methyl-5′-pyrazolone-4′)-1,5-pentanedione and 2,2′-bipyridine

The coordination of 1,5-bis-(1′-phenyl-3′-methyl-5′-pyrazolone-4′)-1,5-pentanedione (BPMPPD) and 2,2′-bipyridine (bipy) with lanthanide ions in water-alcohol solution has been studied. Binuclear complexes of the types : Ln₂(BPMPPD)₃(bipy)₂·nH₂O (n = 2 for Y, n = 4 for Eu, Gd, Dy, Ho, Er, Tm and Yb); Ln₂(BPMPPD)₃bipy·nH₂O (n = 10 for La, n = 3 for Pr, Nd, Sm and Tb) were formed. The compounds were characterized by elemental analysis, molar conductance, IR, UV, ¹H NMR spectroscopy, thermogravimetric analysis and fluorescence spectra.     

Pathway dependence of the efficiency of calculating free energy and entropy of solute–solute association in water

In this study we investigate two alternative pathways to compute the free energy and the entropy of small molecule association (ΔF_assoc and ΔS_assoc) in water. The first route (direct pathway) uses thermodynamic integration as function of the distance R between the solutes. The mean force and the mean covariance of the force with the energy in solution are calculated from molecular dynamics simulation followed by integration of these quantities with respect to the reaction coordinate R. The alternative approach examined (solvation pathway) would first remove the solutes from the solution using thermodynamic integration as function of a solvation coupling parameter λ, change the solute–solute distance in vacuo and then solvate back the solute pair at the new separation distance. The system studied was a pair of CH₄ molecules in water. We investigate the influence of the CH₄–water interaction strength on the obtained ΔF_assoc and ΔS_assoc values by changing van der Waals and Coulomb interaction and evaluated the accuracy and efficiency for the two pathways. We find that the direct route seems more suitable for the calculation of free energies of hydrophobic solutes while the solvation pathway performs better when calculating entropy changes for solutes that have a stronger interaction with the solvent.     

Structures of 3,3′-dicarbometoxy-2,2′-bipyridine complexes with silver(I) and copper(II) cations

The structures of 3,3′-dicarbometoxy-2,2′-bipyridine (dcmbpy) complexes with copper(II) and silver(I) cations have been determined using single crystal X-ray-diffraction. The crystals of Cu(dcmbpy)Cl₂ are monoclinic, C2/c, a = 16.966(3), b = 18.373(3), c = 13.154(2) Å, β = 126.543(3)°. The crystals of Ag(dcmbpy)NO₃ · H₂O are also monoclinic, C2/c, a = 16.7547(13), b = 11.0922(9), c = 18.7789(18) Å, β = 100.228(7)°. The results have been compared with the literature data on the complexes of dcmbpy and its precursors: 2,2′-bipyridine (bpy) and 3,3′-dicarboxy-2,2′-bipyridine (dcbpy). Two types of complexes of 3,3′-carboxy derivatives of bpy are distinguished: (1) with metal atom bonded to two N atoms of the same molecule and (2) with metal atom bonded to two N atoms of two different molecules. The Cu(dcmbpy)Cl₂ complex belongs to the first type, whereas Ag(dcmbpy)NO₃ · H₂O belongs to the second type.     

The intramolecular dynamics of allene in the region around 6000 cm via eigenstate resolved IR spectroscopy

We have recorded and analyzed the molecular beam spectra of allene in the regions of the ν₁ + ν₅ and 2 ν₈ bands around 5947.5 and 6135.5 cm⁻¹, respectively. The ν₁ + ν₅ band only shows minor perturbations and we suspect the presence of a doorway state that causes parallel Coriolis coupling to the bath states. Perpendicular Coriolis interactions do not seem to play an important role since the size of the matrix elements does not increase systematically with J′. The spectrum in the region of the 2 ν₈ band is more complicated; a total of six sub-bands has been identified with K = 0–2. Based on the lack of any systematic dependence on J′ and an inverse dependence of the coupling on K, we expect that neither parallel nor perpendicular Coriolis coupling is present in this band. The effective lifetime for both bands is calculated to be about 200 ps, which is very similar to the lifetimes of an acetylenic C---H stretch overtone.     

Study of the effect of Cal-Red on the secondary structure of human serum albumin by spectroscopic techniques

The effect of Cal-Red on the structure of human serum albumin (HSA) was studied using Resonance light scattering (RLS), Fourier transformed Infrared (FT-IR) and Circular dichroism (CD) spectroscopic methods. The RLS spectroscopic results show that the RLS intensity of HSA was significantly increased in the presence of Cal-Red. The binding parameters of HSA with Cal-Red were studied at different temperatures of 289, 299, 309 and 319 K at pH 4.1. It is indicated by the Scatchard plots that the binding constant K decreased from 4.03 × 10⁸ to 7.59 × 10⁷ l/mol and the maximum binding number N decreased from 215 to 152 with increasing the temperature, respectively. The binding process was exothermic and spontaneous, as indicated by the thermodynamic analyses, and the major part of the binding energy is hydrophobic interaction. The enthalpy change ΔH⁰, the free energy change ΔG⁰ and the entropy change ΔS⁰ of 289 K were calculated to be −42.75 kJ/mol, −47.56 kJ/mol and 16.66 J/mol K, respectively. The alterations of protein secondary structure in the presence of Cal-Red in aqueous solution were quantitatively calculated from FT-IR and CD spectroscopy with reductions of -helices content about 5%, β-turn from 10% to 2% and with increases of β-sheet from 38% to 51%.     

Evidence for the importance of intermolecular coupling in the OD band''s vibrational structure in deeply supercooled liquid D2O

We present the Raman spectrum of pure liquid D₂O at −27.0°C, 17°C lower than any previously reported Raman spectrum of liquid D₂O. The liquid's OD stretch band at −27.0°C displays a prominent feature which is clearly analogous to the ν₁ in-phase mode in D₂O ice Ih providing strong evidence that the structure of cold liquid D₂O's OD band is principally due to strong intermolecular coupling. Deeply supercooled liquid D₂O displays this ν₁ in-phase feature more clearly than deeply supercooled liquid H₂O due to the smaller disparity in the D/O mass ratio compared to that of H/O which enhances this coupling.     

La-NMR-spektroskopie an allyllanthan(III)-komplexen

¹³⁹La-NMR chemical shifts were measured for several anionic complexes of formulae Li(C₄H₈O₂)_3/2 [La(ν³-C₃H₅)₄], [Li(C₄H₈O₂)₂][Cp′_nLa(ν³-C₃]H₅)_4−n] (Cp′ = Cp(ν⁵-C₅H₅); n = 1, 2 and Cp′ = Cp * (ν⁵-C₅Me₅); N = 1) and Li[R_nLa(ν³-C₃H₄)₄−n] (R = N(SiMe₃)₂; n = 1, 2 and R = CCsIMe₃; n = 4), as well as for neutral compounds for formulae La(ν³-C₃H₅)₃L_n (L = (C₄H₈O₂)_1.5, (HMPT)₂, TMED), Cp′_nLa(ν³-C₃H₅)_3−n (Cp′= Cp(ν⁵-Cp₅H₅), Cp *(ν⁵-C₅Me₅); n = 1, 2) and La(ν³-C₃H₂)₂X(THF)₂ X = Cl, Br, I). Typical ranges of the ¹³⁹La-NMR chemical shifts were found for the different types of complex independent of number and kind of organyl groups directly bonded to lanthanum.

Zusammenfassung

¹³⁹La-NMR-Spektroskopie wurde an einer Reihe anionischer Allyllanthanat(III)-Komplexe der Zusammensetzung ]- [La)ν³-C₃H₅)₄, [Li(C₄H₈)₂][Cp′_nLa(ν³-C₃H₅)_4−n(Cp′ = Cp(ν⁵-C₅H₅); n = 1, 2 und Cp′ = Cp * (ν⁵-C₅Me₅); N = 1) und Li[R_nLa(ν³-C₃H₅)_4−n (R = B(SiMe₃)₂; n = 1, 2 und R = CCSiMe₃; n = 4 sowie neutraler Allyllanthan(III)-Komplexe der Zusammensetzung La(ν³-C₃H₅)₃L_n (L_n = (C₄H₈O₂)_1.5, (HMPT)₂, TMED), Cp′_n, La(ν³-C₃H₅)_3−n (Cp′ = Cp(ν⁵-C₅H₅), Cp * (ν⁵- Cp₅Me₅); n = 1, 2) und La(ν³-Cp₃H₅)₂X(THF)₂ (X = Cl, Br, I) durchgefürt. In Abhängikeit von der Anzahl und der Art der am Lanthan gebundenen Gruppen wurden für die verschieden Komplextypen charakteristische Resonanzbereiche ermittelt.     

Application of the spectroscopic modifications of Pippard relations to NaNO2 in the ferroelectric phase

This study examines a linear variation of the specific heat C_P with the frequency shifts 1/ν(∂ν/∂T) for the Brillouin frequencies of the L-mode [010], [001] and [100] in the ferroelectric phase of NaNO₂ according to our spectroscopically modified Pippard relation. We obtain this linear relationship for those modes studied and calculate dT_C/dP in the ferroelectric phase of NaNO₂. Our calculated values of dT_C/dP for the [001] and [100] modes are in good agreement with the values given in the literature.     

Polarised vibrational spectra of KH2PO3 single crystal

Polarised IR and Raman spectra for KH₂PO₃ single crystal samples were measured at room temperature. Additionally, the IR spectra for the Xb(Z) sample were also measured at low temperatures (300–14 K). The spectra are discussed on the basis of oriented gas model and group theory. The stretching νOH vibrations of the hydrogen bonds with the OO distances of 2.547 and 2.529 Å give characteristic broad ABC-type bands in the IR (polarised parallel to the X and to the b(Z) directions) and Raman (xx, xz and yx) spectra. The Davydov-type (correlation field or factor group) splitting is not observed for the νOH modes. The presence of two independent hydrogen bonds in the crystal is manifested by splitting of the C band into two (C′, C″) components and by the different frequencies of the out-of-plane bending γOH vibrations. The in-plane bending modes δOH are strongly mixed/coupled with the stretching vibrations of the PO₃ groups.

The C bands (C′ and C″) change into quite sharp bands on lowering of the temperature. Various simplified models for internal vibrations of the phosphite anions are applied for finding a correlation between the crystal structure and polarised vibrational spectra. The stretching vibrations of the νPH groups manifest their unequivalence in two symmetry-independent hydrogenphosphite anions.     

Anomalous electric birefringence behavior of sonicated DNA fragments as observed in reversing-pulse transients and steady-state sign reversal: a multicomponent approach

Anomalous electric birefringence signals of a sonicated and column-fractionated medium-size calf thymus DNA sample (bp  =  570) in Na⁺ solutions were measured at 7 °C. The reversing-pulse electric birefringence (RPEB) signal pattern was theoretically calculated in the low electric field region for two axially symmetric models coexisting in equilibrium in solution. The RPEB theory is based on the electric dipole moment due to ion-fluctuation along the longitudinal direction and the electric polarizability anisotropy (Δ′), together with various electric and optical parameters assigned to the models. An analytical method was developed for the steady-state birefringence of the two-component system in a wide range of electric fields. The NaDNA samples exhibit complex RPEB patterns mixed with negative- and positive-going profiles. An experimental RPEB signal of NaDNA at an absorbance (A₂₆₀) of 8 was fitted to theoretical curve at weak electric fields. The anomalous RPEB signal was attributed to the component 2, which shows a dip in the buildup and another in the reverse processes with a positive sign and a larger relaxation time. For the component 1, a normal DNA profile with negative sign is associated with a narrow dip in the reverse and a faster relaxation time in the decay signal. The field-strength dependence of observed steady-state birefringence δ(∞) could be fitted for NaDNA at A₂₆₀  =  8 by the SUSID orientation function with saturated ionic and electronic moments. An apparent positive maximum and the sign reversal in δ(∞) at weak electric fields is an interplay between the positive component 2 with positive optical factor Δg and negative Δ′ and the negative component 1 with negative Δg and positive Δ′. Possible conformation of two DNA components involved in solution was estimated.     

Infrared study of νOD modes in isotopically dilute (HDO) kieserite-type compounds MXO4·H2O (M=Mn, Co, Ni, Zn, and X=S, Se) with matrix-isolated M′ and X′O4 guest ions

The hydrogen bond strength in kieserite-type sulfate and selenate monohydrates has been studied by the method of double-matrix spectroscopy. The infrared spectra of isotopically dilute (matrix-isolated HDO molecules) kieserite-type compounds MXO₄·H₂O (M=Mn, Co, Ni, Zn, and X=S, Se) with matrix-isolated X′O₄²⁻ and M′²⁺ guest ions are presented and discussed in the region of the OD stretching modes. The OD frequencies indicate that the compounds under investigation form comparatively strong hydrogen bonds. The frequency shifts of the uncoupled OD stretching modes of the HDO molecules within the isostructural series and those influenced by the guest ions, and the strength of the hydrogen bonds formed, are discussed in terms of the respective O_wO distances, which hint at stronger hydrogen bonds for the sulfate series than for the selenate one by mistake, the larger hydrogen bond acceptor capability of SeO₄²⁻ ions compared to SO₄²⁻ ones, the different metal–water interactions and repulsion potentials of the lattice, and the reorientation of the water molecules caused by the guest ions. The shifts of the OD stretches of the ODOSe′O₃ bonds (Se′O₄²⁻ matrix isolated) to the lower wavenumbers as compared to the parent selenates are caused by the reorientation of the hydrate water molecules and strengthening the hydrogen bond to the stronger acceptor and vice versa. When smaller metal ions having smaller M–OH₂ bond lengths and, hence, stronger synergetic effect replace larger ones, the OD stretches are shifted to lower wavenumbers as compared to those due to the host M–O_wO bonds and vice versa.     

Solution enthalpies of hydrates LnCl3·xH2O (Ln=Ce–Lu)

Trichlorides of the lanthanide elements Ln=Ce–Lu form: (a) isotypic hexahydrates LnCl₃·6H₂O with a coordination number (CN) 8 for the Ln³⁺ ions. (b) Two isotypic groups of trihydrates LnCl₃·3H₂O, in the first group Ln=Ce-Dy the CN is 8; the structure of the second group Ln=Er–Lu is unknown. With Ho no trihydrate exists; a dihydrate is formed. (c) Two isotypic groups of monohydrates LnCl₃·H₂O with unknown structure – Ln=Ce–Dy and Ln=Ho–Lu. For all compounds and for anhydrous chlorides LnCl₃ solution enthalpies were measured with an isoperibolic calorimeter. The Δ_solH⁰ values do not depend only on the difference (lattice enthalpies/hydration enthalpies), but also on the state in solution. According to Spedding the CN of the Ln³⁺ ions against water changes from 9 to 8 between Nd and Sm, causing minima in the series of solution enthalpies. Dihydrates LnCl₃·2H₂O are found for Ln=Ce, Pr, Nd, Sm and presumably for Eu and Gd. They are not yet well characterised.     

Preparation, properties, and reactions of metal-containing heterocycles: Part CV. Synthesis and structure of polyoxadiphosphaplatinaferrocenophanes

A series of novel heterobimetallic crown ether-like polyoxadiphosphaplatinaferrocenophanes cis-[1,1′-Fc(CH₂O(CH₂CH₂O)_nCH₂CH₂PPh₂)₂]PtCl₂ (n=1–3) (4a–c) was synthesized in good yield by cyclization of the bis(phosphine) ligands 1,1′-Fc(CH₂O(CH₂CH₂O)_nCH₂CH₂PPh₂)₂ (n=1–3) (3a–c) and (PhCN)₂PtCl₂ under high dilution conditions in CH₂Cl₂. The bisphosphines 3a–c are obtained by reaction of the corresponding diols 1,1′-Fc(CH₂O(CH₂CH₂O)_nCH₂CH₂OH)₂ (n=1–3) (1a–c) with: (i) CH₃SO₂Cl in CH₂Cl₂ and (ii) LiPPh₂ in THF. Although the X-ray crystal structure of 4a shows that the cavity is large enough for the encapsulation of small metal cations, inclusion experiments of 4a–c with Group 1 cations, and Mg²⁺, or NH₄⁺ in solution applying NMR titration and cyclovoltammetric methods reveal no evidence for the formation of host–guest complexes for 4a,b. In the case of 4c only the addition of Na⁺ or K⁺ leads to an insignificant effect.     

Crystalline calcium phenylphosphonate—thermodynamic data on n-alkylmonoamine intercalations

Lamellar crystalline calcium phenylphosphonate, as anhydrous Ca(HO₃PC₆H₅)₂ and hydrated Ca(HO₃PC₆H₅)₂·2H₂O compounds, were used as hosts for intercalation of polar n-alkylmonoamine molecules of the general formula CH₃(CH₂)_nNH₂ (n=0–4, 7) in water or 1,2-dichloroethane. An increase in the interlayer distance was observed. The exothermic enthalpic values for intercalation increased with the number of carbon atoms and with increasing concentration of the amines. The intercalation followed by a titration procedure in the solid/liquid interface with Ca(HO₃PC₆H₅)₂·2H₂O and Ca(HO₃PC₆H₅)₂ gave the enthalpy/number of carbons correlations: Δ_intH=−(1.74±0.43)–(1.30±0.13)n_c and Δ_intH=−(4.15±0.15)–(1.07±0.03)n_c, for water and 1,2-dichloroethane, respectively. A similar correlation Δ_intH=−(4.27±0.80)–(1.85±0.21)n_c was obtained in water by using the ampoule breaking procedure for Ca(HO₃PC₆H₅)₂·2H₂O. The increase in exothermic enthalpic values with the increase in n-aliphatic carbon atoms is more pronounced for the anhydrous compound and also when using the ampoule breaking procedure. The Gibbs free energies are negative. Positive entropic values favor intercalation in these systems.     

Substantial velocity dependence of rotationally inelastic collision cross sections in Li2—Xe

A Doppler-based velocity selection technique has been used to measure the relative velocity dependence of the cross sections σ_ji,Δ(ν_r) for rotationally inelastic collisions from level j_i to j_i + Δν₁ = 8,22,42) in ⁷Li^*₂ A ¹Σ⁺_u)—Xe. The σ_jν^±2(ν_r) are strongly attenuated at a smaller ν_r by “torque averaging” due to molecular rotation; in contrast, for large |Δ|, σ_jiΔ = ν_r⁻ⁿ (1 n 2). An empirical intermolecular potential which reproduces these types of behavior for 3-D classical trajectories is exhibited.