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采用密度泛函理论(DFT)B3LYP方法和6-311+G(d,p)基组对肾上腺素-胞嘧啶复合物进行结构优化和频率计算,得到15种稳定的复合物.研究发现,所有的复合物进行基组重叠误差(BSSE)校正后的相互作用能为-11.43^-48.96kJ/mol,符合氢键能量范围,相互作用能主要由氢键所贡献.结构和振动频率分析显示,氢键的形成使相应O(N)—H键的键长变长,对称伸缩振动频率减小,说明复合物中形成的氢键都是正常的红移型氢键.应用自然键轨道(NBO)理论和分子中的原子(AIM)理论对15种复合物的氢键性质和特征进行分析,发现氢键对于复合物的稳定性起着重要作用,当复合物形成2个或更多的氢键时,氢键的数目、类型及强度共同决定着复合物的稳定性,复合物基本符合三氢键〉二氢键〉单氢键的稳定顺序,三氢键复合物4是最稳定的,复合物3存在单氢键O—H…O,比部分二氢键复合物要稳定. 相似文献
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采用密度泛函理论的B3LYP方法,在6-31+G*基组水平上研究了儿茶素-胞嘧啶分子间相互作用机制,得到稳定的儿茶素-胞嘧啶复合物11个.计算结果表明氢键对于复合物的稳定性起着重要的作用,并且当复合物形成2个或更多的氢键时,氢键的类型及强度共同决定着复合物的稳定性.我们还应用了分子中的原子(AIM)理论和自然键轨道(NBO)理论对这11种复合物中氢键的性质和特征进行了分析.通过研究发现,所有的氢键复合物进行基组重叠误差(BSSE)校正后的相互作用能为-17.35~-43.27kJ/mol,相互作用能主要由氢键所贡献.振动分析显示,氢键的形成使相对应键的对称伸缩振动频率减小,说明这些复合物中形成的氢键都是正常的红移型氢键,与实验结果相一致. 相似文献
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随着高分子科学的发展,高分子的性质需要更多的理论给予解释。本文介绍了目前正在形成的密度泛函理论方法及其在高分子结构和性能研究中的应用。由于该理论处于初始阶段,有许多问题尚待研究。 相似文献
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以SiO2簇模型为基体,通过Ti原子取代建立Ti中心原子上连接0个或1个OH基团的典型SiO2-TiO2复合氧化物模型来模拟处于体相中和表面上的四配位Ti(IV)中心.采用广义梯度近似的密度泛函理论(DFT-GGA)研究了CuCl与SiO2-TiO2载体的相互作用.计算结果表明,在SiO2基体中嵌入Ti(IV)离子可以大大加强CuCl与氧化物载体之间的相互作用,使CuCl/SiO2-TiO2催化剂的结构更稳定.分子前线轨道表明Cu(I)作为催化剂的活性中心贡献了HOMO轨道,容易失去电子;Ti(IV)中心原子贡献LUMO轨道,容易得到电子,计算结果与实验事实相一致. 相似文献
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应用密度泛函理论的MPW1K,BHandHLYP和MPWB1K方法,结合6-31+G(d,p)基组优化了烯丙醇与臭氧反应势能面上各驻点的几何构型,通过同一水平的振动频率分析确认了中间体和过渡态.反应路径上的驻点都在HL理论水平下进行单点能量校正,并进行了MPW1K/6-31+G(d,p)水平下的零点振动能校正(ZPE).对反应机理的详尽分析表明臭氧抽取烯丙醇羟基基团中H的通道的反应势垒比臭氧加合烯丙醇双键基团通道的反应势垒高,臭氧与烯丙醇双键加合生成臭氧化物为最可几反应路径.在加合反应历程中,氢迁移通道需经过氢迁移和离解等复杂过程,最终要产生少量的OH自由基,与烃烯类臭氧化反应产生大量OH自由基的结果相反. 相似文献
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Interactions of Anionic and Neutral Serine with Pure and Metal-doped Graphene Studied by Density Functional Theory 下载免费PDF全文
Qun Wang Meng-hao Wang Ke-feng Wang Yong-chi Zhao Wei-li Wang Li-ping Zhang 《化学物理学报(中文版)》2016,29(4):437-444
We present a theoretical study of interactions of anionic and neutral serine (Ser) on pure or metal-doped graphene surfaces using density functional theory calculations. Interactions of both types of Ser with the pure graphene surface show weak non-covalent interactions due to the formation of -COOH…π, -COO-…π, and -OH…π interactions. On metaldoped graphene, covalent interactions to the surface dominate, due to the formation of strong metal-O and O-metal-O interactions. Furthermore, the doped Fe, Cr, Mn, Al, or Ti enhances the ability of graphene to attract both types of Ser by a combination of the adsorption energy, the density of states, the Mulliken atomic charges, and differences of electron density. At the same time, the interaction strengths of anionic Ser on various graphene surfaces are stronger than those of neutral Ser. These results provide useful insights for the rational design and development of graphene-based sensors for the two forms of Ser by introducing appropriate doped atoms. Ti and Fe are suggested to be the best choices among all doped atoms for the anionic Ser and neutral Ser, respectively. 相似文献
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The effect of pressure on the microphase separation of diblock copolymer melts was investigated by dynamic density functional theory based on equation of state. The results correspond well with experiment data. With the application of high pressure, all of the phase regions corresponding to the different ordered morphologies become narrower. However, the pressure dependence of the order‐disorder transition temperature (TODT) relies on the symmetry of the diblock copolymer. In the very non‐symmetrical case when f is small, TODT decreases with increasing pressure, while in the symmetrical case when f = 0.5, TODT increases with increasing pressure. For the latter case, the increase in the total bead number of the system at the ODT is found, which is in good accordance with the experimental phenomenon that there is an increase in volume accompanying with the transition from ordered to disordered state. In contrast to the temperature, the pressure does not influence the starting time and the duration of microphase separation.
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Anna Maria Mazzone 《Journal of Cluster Science》2007,18(4):797-815
The focus of this study is on compound clusters and, due to the existence of many phases with different structural properties,
tin-based materials have been chosen as the reference case. The clusters considered below are of two types: in the first case
the clusters have the skeleton of the pure tin clusters and are doped with oxygen and aluminum atoms with composition Sn
x
Y
y
with Y = Al, O, x = 1, 10 and y = 1, 2. In the second case the clusters have a rutile lattice with a columnar or a spherical shape and a size up to 80 atoms
and are doped with a number of aluminum atoms up to 20. The calculations are based on the Density Functional Theory (DFT)
and the results describe the cluster structure, its binding energy and the density of states (DOS). The general indication
of the calculations is that the additive coordinates outside, rather than inside, the pristine skeleton with the formation
of hybrid bonds with properties similar to the ones of the host atoms. Also conspicuous effects of hybridization are observed
in the electronic structure and, due to these effects, the binding energy may decrease with respect to the one in the undoped
clusters. 相似文献
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Luca Schiaffino Dr. Gianfranco Ercolani Prof. Dr. 《Chemistry (Weinheim an der Bergstrasse, Germany)》2010,16(10):3147-3156
The mechanism of the Soai reaction has been thoroughly investigated at the M05‐2X/6‐31G(d) level of theory, by considering ten energetically distinct paths. The study indicates the fully enantioselective catalytic cycle of the homochiral dimers to be the dominant mechanism. Two other catalytic cycles are shown to both be important for correct understanding of the Soai reaction. These are the catalytic cycle of the heterochiral dimer and the non‐enantioselective catalytic cycle of the homochiral dimers. The former has been proved to be not really competitive with the principal cycle, as required for the Soai reaction to manifest chiral amplification, whereas the latter, which is only slightly competitive with the principal one, nicely explains the experimental enantioselectivity observed in the reaction of 2‐methylpyrimidine‐5‐carbaldehyde. The study has also evidenced the inadequacy of the B3LYP functional for mechanistic investigations of the Soai reaction. 相似文献
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Dr. Michael Fischer 《Chemphyschem》2023,24(9):e202300022
The anticonvulsant drug carbamazepine (−) is an emerging contaminant of considerable concern due to its hazard potential and environmental persistence. Previous experimental studies proposed hydrophobic zeolites as promising adsorbents for the removal of carbamazepine from water, but only a few framework types were considered in those investigations. In the present work, electronic structure calculations based on dispersion-corrected density functional theory (DFT) were used to study the adsorption of CBZ in eleven all-silica zeolites having different pore sizes and connectivities of the pore system (AFI, ATS, BEA, CFI, DON, FAU, IFR, ISV, MOR, SFH, SSF framework types). It was found that some zeolites with one-dimensional channels formed by twelve-membered rings (IFR, AFI) exhibit the highest affinity towards CBZ. A “good fit” of CBZ into the zeolite pores that maximizes dispersion interactions was identified as the dominant factor determining the interaction strength. Further calculations addressed the role of temperature (for selected systems) and of guest-guest interactions between coadsorbed CBZ molecules. In addition to predicting zeolite frameworks of particular interest as materials for selective CBZ removal, the calculations presented here also contribute to the atomic-level understanding of the interaction of functional organic molecules with all-silica zeolites. 相似文献
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Huilong Dong Fenglou Gu Min Li Bencai Lin Zhihong Si Prof. Tingjun Hou Prof. Feng Yan Dr. Shuit‐Tong Lee Youyong Li 《Chemphyschem》2014,15(14):3006-3014
Imidazolium cations are promising candidates for preparing anion‐exchange membranes because of their good alkaline stability. Substitution of imidazolium cations is an efficient way to improve their alkaline stability. By combining density functional theory calculations with experimental results, it is found that the LUMO energy correlates with the alkaline stability of imidazolium cations. The results indicate that alkyl groups are the most suitable substituents for the N3 position of imidazolium cations, and the LUMO energies of alkyl‐substituted imidazolium cations depend on the electron‐donating effect and the hyperconjugation effect. Comparing 1,2‐dimethylimidazolium cations (1,2‐DMIm+) and 1,3‐dimethylimidazolium cations (1,3‐DMIm+) with the same substituents reveals that the hyperconjugation effect is more significant in influencing the LUMO energy of 1,3‐DMIms. This investigation reveals that LUMO energy is a helpful aid in predicting the alkaline stability of imidazolium cations. 相似文献
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Introduction Palladium(II) complexes, as a promising artificial metallopeptidase, have been extensively studied for se-lective cleavage of methionine and histidine-containing dipeptides,1-11 oligopeptides12-16 and proteins.16-20 Dipeptides AcMet-aa and AcHis-aa, in which the amino-terminus is protected by acetylation and aa is an amino acid residue, are usually cleaved at the Met-aa and His-aa bond with a modest but significant turn-over.6,7,9 In oligopeptides which contain Met or His or b… 相似文献