Optically active micelles from self-assembly of MPEG-b-PMALM copolymer in water

Reported here is fabrication of optically active micelles with broad range of morphologies in water,such as spheres,cylinders, and vesicles,from self-assembly of poly(ethylene glycol)monomethyl ether-b-poly-(methacryloyl-L-leucine methyl ester) (MPEG-b-PMALM)copolymer,which was prepared via atom transfer radical polymerization(ATRP)from vinyl monomer bearing chiral amino acid moieties,N-methacryloyl L-leucine methyl ester(MALM),using bromine(Br)end-capped poly(ethylene golycol)monomethylether(MPEG-Br)as ...     

Paramagnetic active site models for the molybdenum-copper carbon monoxide dehydrogenase

New paramagnetic, heterobimetallic Mo/Cu complexes featuring the Mo(=O)(mu-S)Cu core of O. carboxidovorans carbon monoxide dehydrogenase have been synthesized and structurally and spectroscopically characterized. The complexes exhibit EPR spectra (left graphic) indicative of extensive electron delocalization across the Mo-S-Cu core, in agreement with computational studies identifying the singly-occupied molecular orbital (right graphic).     

Hydride-containing models for the active site of the nickel-iron hydrogenases

The [NiFe]-hydrogenase model complex NiFe(pdt)(dppe)(CO)(3) (1) (pdt = 1,3-propanedithiolate) has been efficiently synthesized and found to be robust. This neutral complex sustains protonation to give the first nickel-iron hydride [1H]BF(4). One CO ligand in [1H]BF(4) is readily substituted by organophosphorus ligands to afford the substituted derivatives [HNiFe(pdt)(dppe)(PR(3))(CO)(2)]BF(4), where PR(3) = P(OPh)(3) ([2H]BF(4)); PPh(3) ([3H]BF(4)); PPh(2)Py ([4H]BF(4), where Py = 2-pyridyl). Variable temperature NMR measurements show that the neutral and protonated derivatives are dynamic on the NMR time scale, which partially symmetrizes the phosphine complex. The proposed stereodynamics involve twisting of the Ni(dppe) center, not rotation at the Fe(CO)(2)(PR(3)) center. In MeCN solution, 3, which can be prepared by deprotonation of [3H]BF(4) with NaOMe, is about 10(4) stronger base than is 1. X-ray crystallographic analysis of [3H]BF(4) revealed a highly unsymmetrical bridging hydride, the Fe-H bond being 0.40 ? shorter than the Ni-H distance. Complexes [2H]BF(4), [3H]BF(4), and [4H]BF(4) undergo reductions near -1.46 V vs Fc(0/+). For [2H]BF(4), this reduction process is reversible, and we assign it as a one-electron process. In the presence of trifluoroacetic acid, proton reduction catalysis coincides with this reductive event. The dependence of i(c)/i(p) on the concentration of the acid indicates that H(2) evolution entails protonation of a reduced hydride. For [2H](+), [3H](+), and [4H](+), the acid-independent rate constants are 50-75 s(-1). For [2H](+) and [3H](+), the overpotentials for H(2) evolution are estimated to be 430 mV, whereas the overpotential for the N-protonated pyridinium complex [4H(2)](2+) is estimated to be 260 mV. The mechanism of H(2) evolution is proposed to follow an ECEC sequence, where E and C correspond to one-electron reductions and protonations, respectively. On the basis of their values for its pK(a) and redox potentials, the room temperature values of ΔG(H?) and ΔG(H-) are estimated as respectively as 57 and 79 kcal/mol for [1H](+).     

Synthetic models of the reduced active site of superoxide reductase

We report the synthesis, structural and spectroscopic characterization, and magnetic and electrochemical studies of a series of iron(II) complexes of the pyridyl-appended diazacyclooctane ligand L(8)py(2), including several that model the square-pyramidal [Fe(II)(N(his))(4)(S(cys))] structure of the reduced active site of the non-heme iron enzyme superoxide reductase. Combination of L(8)py(2) with FeCl(2) provides [L(8)py(2)FeCl(2)] (1), which contains a trigonal-prismatic hexacoordinate iron(II) center, whereas a parallel reaction using [Fe(H(2)O)(6)](BF(4))(2) provides [L(8)py(2)Fe(FBF(3))]BF(4) (2), a novel BF(4)(-)-ligated square-pyramidal iron(II) complex. Substitution of the BF(4)(-) ligand in 2 with formate or acetate ions affords distorted pentacoordinate [L(8)py(2)Fe(O(2)CH)]BF(4) (3) and [L(8)py(2)Fe(O(2)CCH(3))]BF(4) (4), respectively. Models of the superoxide reductase active site are prepared upon reaction of 2 with sodium salts of aromatic and aliphatic thiolates. These model complexes include [L(8)py(2)Fe(SC(6)H(4)-p-CH(3))]BF(4) (5), [L(8)py(2)Fe(SC(6)H(4)-m-CH(3))]BF(4) (6), and [L(8)py(2)Fe(SC(6)H(11))]BF(4) (7). X-ray crystallographic studies confirm that the iron(II)-thiolate complexes model the square-pyramidal geometry and N(4)S donor set of the reduced active site of superoxide reductase. The iron(II)-thiolate complexes are high spin (S = 2), and their solutions are yellow in color because of multiple charge-transfer transitions that occur between 300 and 425 nm. The ambient temperature cyclic voltammograms of the iron(II)-thiolate complexes contain irreversible oxidation waves with anodic peak potentials that correlate with the relative electron donating abilities of the thiolate ligands. This electrochemical irreversibility is attributed to the bimolecular generation of disulfides from the electrochemically generated iron(III)-thiolate species.     

Hydrogenase enzymes: Recent structural studies and active site models

Recent developments in active site structure determination of the three types of hydrogenase enzymes are described. Aspects of recent studies using model complexes relevant to the structure and function of the enzymes are reviewed.     

Patterned surfaces via self-assembly

The self-assembly of block copolymers, homopolymers and surfactants on surfaces often leads to well-defined patterns with topologically or chemically distinct regions. Important recent developments in controlling the nature of the pattern include methods to produce patterns via passive adsorption of a solid substrate; coupling of substrate topology and polymer phase separation in order to effect control over pattern formation; and methods to `tune' the surface potential of the substrate to eventually control pattern formation. The use of the polymer-patterned surface as a nanolithography mask has also been demonstrated in two very interesting systems. © 1999 Elsevier Science Ltd.     

Structural and functional models of the active site of zinc phosphotriesterase

In an attempt to prepare structural and functional models for the active site of the hydrolytic enzyme zinc phosphotriesterase, five new zinc complexes of the ligands 2,6-bis[N-(N-(carboxylmethyl)-N-((1-methylimidazol)methyl)amine)methyl]-4-methylphenolate (BCIMP) and the corresponding asymmetric ligand 2-(N-isopropyl-N-((1-methylimidazolyl)methyl)aminomethyl)-6-(N-carboxylmethyl-N-((1-methylimidazolyl)methyl)aminomethyl)-4-methylphenol (ICIMP) have been synthesized, viz. Na[Zn(2)(BCIMP)Ac(2)] (1), [Zn(2)(BCIMP)(Ph(2)Ac)] (2), [Zn(2)(ICIMP)Ac(2)] (3), [Zn(4)(ICIMP)(2)(Me(3)Ac)(2)][ClO(4)](2) (4), and [Zn(4)(ICIMP)(2)(Ph(2)Ac)(2)][ClO(4)](2) (5). The X-ray structure of complex 5 has been determined and reveals that the complex is a dimer of dimers in the solid state, which in solution dissociates to potent structural models. Studies using NMR show that only one carboxylate coligand bridges the dizinc units in the case of diphenyl acetate and pivalate, while the steric bulk of acetate is sufficiently small to permit the coordination of two acetates/dizinc unit. Functional studies involving the hydrolysis/transesterification of 2-hydroxypropyl p-nitrophenyl phosphate (HPNP) show that the complex with ICIMP (compound 5) has a significantly higher rate of catalysis than the BCIMP complex (compound 2). This is attributed to the vacant/labile coordination site that is available in the ICIMP complex but not the BCIMP complex.     

Design of heterogeneous catalysts via multiple active site positioning in organic-inorganic hybrid materials

Catalytic materials bearing multiple sulfonic acid functional groups and positioned at varying distances from one another on the surface of mesoporous solids are prepared to explore the effects that the spatial arrangement of active sites have on catalytic activity and selectivity. A series of organosiloxane precursors containing either disulfide or sulfonate ester functionalities (synthons of the eventual sulfonic acid groups) are synthesized. From these molecular precursors, a variety of organic-inorganic hybrid, mesostructured SBA-15 silica materials are prepared using a postsynthetic grafting procedure that leads to disulfide and sulfonate ester modified silicas: [Si]CH(2)CH(2)CH(2)SS-pyridyl, 2.SBA, [Si]CH(2)CH(2)CH(2)SSCH(2)CH(2)CH(2)[Si], 3.SBA, [Si]CH(2)CH(2)(C(6)H(4))(SO(2))OCH(2)CH(3), 4.SBA, and [Si]CH(2)CH(2)(C(6)H(4))(SO(2))OC(6)H(4)O(SO(2))(C(6)H(4))CH(2)CH(2)[Si], 6.SBA ([Si] = (tbd1;SiO)(x)()(RO)(3)(-)(x)()Si, where x = 1, 2). By subsequent chemical derivatization of the grafted species, thiol and sulfonic acid modified silicas are obtained. The materials are characterized by a variety of spectroscopic ((13)C and (29)Si CP MAS NMR, X-ray diffraction) and quantitative (TGA/DTA, elemental analysis, acid capacity titration) techniques. In all cases, the organic fragment of the precursor molecule is grafted onto the solid without measurable decomposition, and the precursors are, in general, attached to the surface of the mesoporous oxide by multiple siloxane bridges. The disulfide species 2.SBA and 3.SBA are reduced to the corresponding thiols 7.SBA and 8.SBA, respectively, and 4.SBA and 6.SBA are transformed to the aryl sulfonic acids 11.SBA and 12.SBA, respectively. 7.SBA and 8.SBA differ only in terms of the level of control of the spatial arrangement of the thiol groups. Both 7.SBA and 8.SBA are further modified by oxidation with hydrogen peroxide to produce the alkyl sulfonic acid modified materials 9.SBA and 10.SBA, respectively. The performances of the sulfonic acid containing SBA-15 silica materials (with the exception of 12.SBA) are tested as catalysts for the condensation reaction of phenol and acetone to bisphenol A. The alkyl sulfonic acid modified material 10.SBA derived from the cleavage and oxidation of the dipropyl disulfide modified material 3.SBA is more active than not only its monosite analogue 9.SBA, but also the presumably stronger acid aryl sulfonic acid material 11.SBA. It appears that a cooperative effect between two proximal functional groups may be operating in this reaction.     

A combinatorial approach to minimal peptide models of a metalloprotein active site

Screening of a "one-bead-one-compound" peptide library containing biomimetic His/Cys ligands has led to the discovery of sequences that hydrolyze ester substrates in combination with Zn2+.     

Dinuclear iron isonitrile complexes: models for the iron hydrogenase active site

Reaction of Fe(2)(mu-S(2)C(3)H(6))(CO)(6) (1) with 2 equiv of t-BuNC affords a disubstitued species Fe(2)(mu-S(2)C(3)H(6))(CN-t-Bu)(2)(CO)(4) (2). The structure of 2 has been determined by X-ray crystallography, which shows that in the solid state both isonitrile ligands are cis to sulfur. In solution, NMR and IR spectroscopy suggest that multiple isomers are present. Protonation of 2 occurs at the Fe-Fe bond to give a cationic complex 3 as four different isomeric species. Complex 3 does not react with deuterium gas (98 psi) in the absence of light. Irradiation of solutions of 3 with visible light under D(2) gas leads to formation of HD.     

Mixed-valence nickel-iron dithiolate models of the [NiFe]-hydrogenase active site

A series of mixed-valence nickel-iron dithiolates is described. Oxidation of (diphosphine)Ni(dithiolate)Fe(CO)(3) complexes 1, 2, and 3 with ferrocenium salts affords the corresponding tricarbonyl cations [(dppe)Ni(pdt)Fe(CO)(3)](+) ([1](+)), [(dppe)Ni(edt)Fe(CO)(3)](+) ([2](+)) and [(dcpe)Ni(pdt)Fe(CO)(3)](+) ([3](+)), respectively, where dppe = Ph(2)PCH(2)CH(2)PPh(2), dcpe = Cy(2)PCH(2)CH(2)PCy(2), (Cy = cyclohexyl), pdtH(2) = HSCH(2)CH(2)CH(2)SH, and edtH(2) = HSCH(2)CH(2)SH. The cation [2](+) proved unstable, but the propanedithiolates are robust. IR and EPR spectroscopic measurements indicate that these species exist as C(s)-symmetric species. Crystallographic characterization of [3]BF(4) shows that Ni is square planar. Interaction of [1]BF(4) with P-donor ligands (L) afforded a series of substituted derivatives of type [(dppe)Ni(pdt)Fe(CO)(2)L]BF(4) for L = P(OPh)(3) ([4a]BF(4)), P(p-C(6)H(4)Cl)(3) ([4b]BF(4)), PPh(2)(2-py) ([4c]BF(4)), PPh(2)(OEt) ([4d]BF(4)), PPh(3) ([4e]BF(4)), PPh(2)(o-C(6)H(4)OMe) ([4f]BF(4)), PPh(2)(o-C(6)H(4)OCH(2)OMe) ([4g]BF(4)), P(p-tol)(3) ([4h]BF(4)), P(p-C(6)H(4)OMe)(3) ([4i]BF(4)), and PMePh(2) ([4j]BF(4)). EPR analysis indicates that ethanedithiolate [2](+) exists as a single species at 110 K, whereas the propanedithiolate cations exist as a mixture of two conformers, which are proposed to be related through a flip of the chelate ring. M?ssbauer spectra of 1 and oxidized S = 1/2 [4e]BF(4) are both consistent with a low-spin Fe(I) state. The hyperfine coupling tensor of [4e]BF(4) has a small isotropic component and significant anisotropy. DFT calculations using the BP86, B3LYP, and PBE0 exchange-correlation functionals agree with the structural and spectroscopic data, suggesting that the SOMOs in complexes of the present type are localized in an Fe(I)-centered d(z(2)) orbital. The DFT calculations allow an assignment of oxidation states of the metals and rationalization of the conformers detected by EPR spectroscopy. Treatment of [1](+) with CN(-) and compact basic phosphines results in complex reactions. With dppe, [1](+) undergoes quasi-disproportionation to give 1 and the diamagnetic complex [(dppe)Ni(pdt)Fe(CO)(2)(dppe)](2+) ([5](2+)), which features square-planar Ni linked to an octahedral Fe center.     

Structure of the oxidized active site of galactose oxidase from realistic in silico models

A systematic in silico approach is employed to generate an accurate model for the catalytically important oxidized state of galactose oxidase (GO) using spectroscopically calibrated hybrid density-functional theory. GO displays three distinct oxidation states: oxidized [Cu(II)-Y*], semireduced [Cu(II)-Y], and fully reduced [Cu(I)-Y], but only the [Cu(II)-Y*] and the [Cu(I)-Y] states are assumed to be involved in catalysis. We have developed multiple models for the oxidized [Cu(II)-Y*] state, whose structure has not yet been fully characterized. These models were evaluated by comparison of calculated and experimental structural data, singlet-triplet energy gaps, and electronic transitions for the antiferromagnetically coupled oxidized [Cu(II)-Y*] state. An extended model system that includes explicit solvent molecules and second coordination sphere residues (R330, Y405, and W290) is essential to obtain the correct electronic structure of the active site. The model with all the residues that have been shown to affect the radical stability and catalysis resulted in a singlet ground state with the radical centered on the Y272-C228 cofactor. The optimized structure of the oxidized GO [Cu(II)-Y*] reveals a five-coordinated square pyramidal coordination geometry very similar to [Cu(II)-Y] with considerably different Cu-ligand distances. The hydrogen-bonding interactions involving Y495 modulates the spin density distribution and the singlet-triplet energy gaps. The final model as the most reasonable structure of the oxidized [Cu(II)-Y*] state in GO reproduces the spectroscopic signature of oxidized GO.     

Functional biomimetic models for the active site in the respiratory enzyme cytochrome c oxidase

A functional analog of the active site in the respiratory enzyme, cytochrome c oxidase (CcO) reproduces every feature in CcO's active site: a myoglobin-like heme (heme a3), a distal tridentate imidazole copper complex (Cu(B)), a phenol (Tyr244), and a proximal imidazole. When covalently attached to a liquid-crystalline SAM film on an Au electrode, this functional model continuously catalyzes the selective four-electron reduction of dioxygen at physiological potential and pH, under rate-limiting electron flux (as occurs in CcO).     

Bio-inspired special wetting surfaces via self-assembly

Self-assembly is the fundamental principle, which can occur spontaneously in nature. Through billions of years of evolution, nature has learned what is optimal. The optimized biological solution provides some inspiration for scientists and engineers. In the past decade, under the multi-disciplinary collaboration, bio-inspired special wetting surfaces have attracted much attention for both fundamental research and practical applications. In this review, we focus on recent research progress in bio-inspired special wetting surfaces via self-assembly, such as low adhesive superhydrophobic surfaces, high adhesive superhydrophobic surfaces, superamphiphobic surfaces, and stimuli-responsive surfaces. The challenges and perspectives of this research field in the future are also briefly addressed.     

Supramolecular colloidal motors via chemical self-assembly

A colloidal motor can convert energy stored in the environment to achieve mechanical motion and exhibit dynamic behaviors in fluids. To overcome the challenges presented to a colloidal motor, controlled molecular self-assembly technology provides new opportunities for the precise fabrication of various nanoarchitectures and facilitates fundamental research on rational design, multifunctionalization, propulsion, and controlled movement of colloidal motors. These molecular assembled colloidal motors, also called supramolecular colloidal motors, can perform special tasks at the micro- and nanoscale in the fields of biomedicine, nanotechnology, and environmental remediation. In this feature article, we first introduce the recent progress of controllable self-assembly of spatially asymmetric supramolecular colloidal motors with variable sizes, structures, and functions and discuss the relationship between structure and propulsion. Next, we review the research progress of this type of colloidal motors in biomedical and environmental fields. Finally, we propose the challenges of the supramolecular colloidal motors and future development direction.     

Programmable protein-protein conjugation via DNA-based self-assembly

Protein molecules were precisely arrayed on a designable DNA scaffold close to each other using a DNA aptamer. By adding a chemical cross-linker, the neighboring protein molecules were effectively and covalently cross-linked to each other without losing their activities.     

Patterned biocatalytic films via one-step self-assembly

Patterned porous films containing enzymes have been facilely prepared via a one-step breath figure process, which is based on the self-assembly of horseradish peroxidase nanoparticles that show good resistance to organic solvents. The patterned biohybrid films possess robust catalytic activity.     

Indistinguishability of the models of molecular self-assembly

Numerous applications dealing with molecular aggregation at the interface of biology, physics and chemistry use either the dimer or the indefinite equilibrium constant models even though there is the well-known property of indistinguishability of the models with respect to fitting experimental data by various experimental techniques. The problem of indistinguishability is uncovered in the present work and the way in which the existing paradigm of how these models should be applied to analysis of molecular self-association is suggested.     

A water sluice is generated in the active site of bovine lens leucine aminopeptidase

Nature has provided the binuclear zinc based active site of bovine lens leucine aminopeptidase (blLAP) with two water channels: one for substrate docking and a much smaller one (function unknown) above Zn1. In addition, Zn1 possesses an unusual pentacoordinate geometry with a loosely bound carbonyl ligand (Ala333). Extensive DFT calculations on a model of the active site provide first mechanistic implications for these structural features. The weakly bound carbonyl ligand is capable of functioning as a "traffic cop" to direct water molecules coming from the small channel into the heart of the active site. A water sluice is thus generated that is capable of repeatedly providing a series of nucleophilic active "Zn-OH" functionalities.