Flexible biphenyl chromophore as a circular dichroism probe for assignment of the absolute configuration of carboxylic acids

A general and nonempirical approach to determine the absolute configuration (AC) of 2-substituted chiral carboxylic acids by circular dichroism (CD) spectroscopy has been developed. In this protocol, the chiral acids are converted to the corresponding biphenyl amides, in which a flexible biphenyl probe gives rise to a Cotton effect at 250 nm (A band) in the CD spectrum, the sign of which is related to the acid AC. Two different mechanisms of transfer of chirality from the acid stereogenic center to the biphenyl moiety are operative in amides derived from 2-alkyl- and 2-aryl-substituted acids, respectively. For both classes of compounds, a model has been defined which allows one to predict, for a given acid AC, the preferred twist of the biphenyl moiety and thus the sign of the A band in the CD spectrum, related to the biphenyl torsion. Interestingly, while in alkyl-substituted substrates the preferred biphenyl twist is determined only by steric interactions, in the aryl-substituted ones the structure of the prevalent conformer and thus the biphenyl twist are dictated by arene-arene edge-to-face stabilizing interactions. Following this protocol, the AC of a 2-substituted chiral acid can be established simply by preparing its biphenyl amides, recording the CD spectrum, and looking at the sign of the A band. From the sign of such a band, the torsion of the biphenyl can be deduced and then the acid AC. Substrates having different structures and functionalities have been investigated, always obtaining reliable AC assignments by this simple protocol.     

Determination of the absolute configuration and identity of chiral carboxylic acids using a Cu(II) complex of pyridine–benzimidazole-based ligand

We report a new achiral Cu host [Cu(bmb–bpy)(H₂O)(OTf)₂] (bmb–bpy = 6,6′-bis[((1-methylbenzimidazol-2-yl)thio)methyl]-2,2′-bipyridine) for the enantioselective and chemoselective recognition of chiral carboxylic acids. The binding of chiral carboxylic acids to [Cu(bmb–bpy)(H₂O)(OTf)₂] produced an exciton-coupled circular dichroism signal; the linear discriminant analysis allowed the assignment of the absolute configuration, enantiomeric excess, and identity of chiral carboxylic acids.     

Studies on the synthesis and properties of ferroelectric side chain liquid crystalline polyoxetanes

Two series of novel ferroelectric liquid crystalline (FLC) monomers were derived from 3-(hydroxymethyl)-3-methyloxetane, used as the backbone unit, and 2-(S)-[2-(S)-methylbutoxy]propionic acid, as a chiral moiety. The corresponding polyoxetanes were prepared by ring-opening polymerization using BF₃ · OEt₂ as an initiator. In addition to the structure identification, their liquid crystal phase behavior and electrical properties are also studied. Before their connection to the chiral molecular moiety, two series of carboxylic acids, 4-(6-[(3-methyloxetan-3-yl)methoxy]alkoxy)-benzoic acids and 4,4′-[6-(3-methyloxetan-3-yl)alkoxy]biphenylcarboxylic acids, show the phase sequence K Sc I and K Sc N I, respectively. After connection, the phase behavior of the corresponding chiral monomers is changed from K Sc I to K Sc* N* I as well as from K Sc N I to K Sc* Sa I. Only the phase sequence K Sc* Sa I is observed in both series of polyoxetanes. All of the synthesized monomers exhibited enantiotropic chiral smectic C(Sc*) phase. The monomers, with the biphenyl unit linked directly with a chiral center, possessed higher spontaneous polarization (P_s) values. Polyoxetanes possess a wide temperature range for the liquid crystal phase, about 120°C, and the Sc* phase range can be up to 95°C. However, the position of the biphenyl unit will not affect the spontaneous polarization of the synthesized side chain FLC polyoxetanes. © 1997 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 35 : 2843–2855, 1997     

A one‐dimensional zinc(II) coordination polymer incorporating [1,1′‐biphenyl]‐4,4′‐dicarboxylate and N,N′‐bis(pyridin‐3‐ylmethyl)‐[1,1′‐biphenyl]‐4,4′‐dicarboxamide ligands

In the title compound, catena‐poly[[[N,N′‐bis(pyridin‐3‐ylmethyl)‐[1,1′‐biphenyl]‐4,4′‐dicarboxamide]chloridozinc(II)]‐μ‐[1,1′‐biphenyl]‐4,4′‐dicarboxylato‐[[N,N′‐bis(pyridin‐3‐ylmethyl)‐[1,1′‐biphenyl]‐4,4′‐dicarboxamide]chloridozinc(II)]‐μ‐[N,N′‐bis(pyridin‐3‐ylmethyl)‐[1,1′‐biphenyl]‐4,4′‐dicarboxamide]], [Zn₂(C₁₄H₈O₄)Cl₂(C₂₆H₂₂N₄O₂)₃]_n, the Zn^II centre is four‐coordinate and approximately tetrahedral, bonding to one carboxylate O atom from a bidentate bridging dianionic [1,1′‐biphenyl]‐4,4′‐dicarboxylate ligand, to two pyridine N atoms from two N,N′‐bis(pyridin‐3‐ylmethyl)‐[1,1′‐biphenyl]‐4,4′‐dicarboxamide ligands and to one chloride ligand. The pyridyl ligands exhibit bidentate bridging and monodentate terminal coordination modes. The bidentate bridging pyridyl ligand and the bridging [1,1′‐biphenyl]‐4,4′‐dicarboxylate ligand both lie on special positions, with inversion centres at the mid‐points of their central C—C bonds. These bridging groups link the Zn^II centres into a one‐dimensional tape structure that propagates along the crystallographic b direction. The tapes are interlinked into a two‐dimensional layer in the ab plane through N—H...O hydrogen bonds between the monodentate ligands. In addition, the thermal stability and solid‐state photoluminescence properties of the title compound are reported.     

The mass spectrometry of DT-and monosubstituted biphenyls: Dependence of fragmentation patterns on position of substitution

This paper describes the mass spectroscopy of a series of biphenyl derivatives substituted in the 2,2′, 4,4′ and 2 positions. The substitutent functional groups are carbomethoxy, carbothoxy, carboxylic acid and hydroxymethyl. In addition, some results are reported on the spectroscopy of the d₅-carboethoxy derivatives, the 2- and 2,2′-αd₂- hydroxymethyl derivatives and fluorene-4-methanol. The molecular ions of the 4,4′-disubstituted biphenyl derivatives are far more stable than those of the 2,2′ isomers. It is also observed that the fragmentation patterns of these two sets of isomers are sharply different. Paradoxically, the 2-substituted biphenyl derivatives give relatively stable molecular ions and their fragmentation patterns are frequently different from those of the corresponding 2,2′-disubstituted biphenyls. The bulk of the evidence presented in this paper suggests that the usual sort of ‘ortho effect’ is not a significant factor in the fragmentation mechanisms proposed for the 2,2′-disubstituted biphenyl derivatives.     

2‐Amino‐1,2,3,6‐tetrahydro‐6‐oxocyclopenta[c]fluorene‐2‐carboxylic Acid (FlAib), a Completely Rigidified,Fluoren‐9‐one‐Based α‐Amino Acid

The synthesis, optical resolution, determination of absolute configuration and conformational preference, and spectroscopic characteristics of terminally protected (blocked) derivatives and short peptides of 2‐amino‐1,2,3,6‐tetrahydro‐6‐oxocyclopenta[c]fluorene‐2‐carboxylic acid (FlAib), a novel, rigid, chiral, cyclized C^α,α‐disubstituted glycine are described.     

Helix formation of poly(phenylacetylene) derivatives bearing amino groups at the meta position induced by optically active carboxylic acids

Two novel phenylacetylene derivatives bearing diethylaminomethyl groups at the meta position on phenyl groups [3‐(N,N‐diethylaminomethyl)phenyl]acetylene ( 1 ) and [3,5‐bis(N,N‐diethylaminomethyl)phenyl]acetylene ( 2 ) were synthesized and polymerized with [Rh(nbd)Cl]₂ (nbd: norbornadiene). Both monomers gave highly cis–transoidal stereoregular polymers that exhibited an induced circular dichroism (ICD) in the UV–visible region, probably because of a prevailing one‐handed helical conformation upon complexation with optically active carboxylic acids such as mandelic acid and lactic acid. The sign of the Cotton effects reflected the absolute configuration of the chiral acids. Therefore, these polymers can be used as a novel probe for determining the configuration of chiral acids. The polymers were stable in the presence of chiral acids in solution. The poly‐ 1 complexed with chiral acids exhibited a split‐type ICD, whereas the poly‐ 2 complexed with chiral acids showed a different, non‐split‐type ICD. The ICD pattern of the poly‐ 1 /chiral acids complexes dramatically changed with an increase in the concentration of the chiral acids, thus showing a non‐split‐type ICD similar to those of the poly‐ 2 /chiral acid complexes. © 2001 John Wiley & Sons, Inc. J Polym Sci Part A: Polym Chem 39: 3180–3189, 2001     

Dynamic Chirality Control of tropos DPCB‐digold Skeleton by Chiral Binaphthyldicarboxylate

The planar 3,4‐diphosphinidenecyclobutene (DPCB) can be remarkably twisted into a C₂‐type helical structure by dual coordination of a AuCl moiety. A prompt chirality control of the twisted DPCB skeleton ligated by the digold units affords the enantiopure structure by exchanging the chloride ligands for chiral [1,1′‐binaphthalene]‐2,2′‐dicarboxylate. The chirality of the diaurated 2,2′‐bis(diphenylphosphanyl)‐1,1′‐biphenyl (BIPHEP) system can be controlled prior to that of DPCB. Mixing of a DPCB‐bis(chlorogold) complex with the chiral silver salt dynamically leads to a single diastereomer, which was characterized by the ³¹P NMR spectrum and the CD couplet patterns in the visible (DPCB) area. The absolute configuration of the singly induced helical structure was assigned by the theoretical CD spectra determined by TD‐DFT calculations. Intramolecular alkoxycyclization of hexa‐4,5‐dien‐1‐ol catalyzed by the asymmetric DPCB‐digold structure were also attempted.     

Poly[[diaqua‐μ‐4,4′‐bipyridine‐dinitratodi‐μ‐l‐tyrosinato‐dicopper(II)]: a chiral two‐dimensional coordination polymer

The title compound, [Cu₂(C₉H₁₀NO₃)₂(NO₃)₂(C₁₀H₈N₂)(H₂O)₂]_n, contains Cu^II atoms and l ‐tyrosinate (l ‐tyr) and 4,4′‐bipyridine (4,4′‐bipy) ligands in a 2:2:1 ratio. Each Cu atom is coordinated by one amino N atom and two carboxylate O atoms from two l ‐tyr ligands, one N atom from a 4,4′‐bipy ligand, a monodentate nitrate ion and a water molecule in an elongated octahedral geometry. Adjacent Cu atoms are bridged by the bidentate carboxylate groups into a chain. These chains are further linked by the bridging 4,4′‐bipy ligands, forming an undulated chiral two‐dimensional sheet. O—H...O and N—H...O hydrogen bonds connect the sheets in the [100] direction. This study offers useful information for the engineering of chiral coordination polymers with amino acids and 4,4′‐bipy ligands by considering the ratios of the metal ion and organic components.     

Applicability of the Mosher MPTA-Ester Methodology to Monosaccharides

Caryophyllose 1 is a novel twelve carbon 4-C-branched monosaccharide and a component of the polysaccharide chains found in the lypopolysaccharide fraction from Pseudormnas caryophylli bacterium.¹ Its absolute stereochemistry was elucidated² by applying the exciton chiral coupling method to two fragments obtained by NaIO₄, oxidation of the polysaccharide chain. The absolute configuration of a chiral secondary alcohol can be defined by Mosher's method.³ It analyzes the signs of the differences between the chemical shifts of the protons vicinal to the chiral Center in the (S)- and (R)-α-methoxy-α-trifluoromethylphenylacetate (MPTA) esters obtained from the compound. However, the Mosher ester methodology failed to give completely reliable results when applied to the bisisopropylidene derivative 2 of caryophyllose. In fact, whereas Δδ_H(δ_R-δ_S) was positive for 3′-H and negative for 5′-H, indicating R configuration for the 4′ chiral centre, it was positive for 1-H but of opposite sign for the two protons at C-3 (negative for 3_eq and positive for 3_ax), failing to indicate the configuration at C-2. This result, however, was in line with Mosher's warning³ about circumspection in applying his correlation to molecules which “contain additional chiral centres, possess heteroatoms, or show unusual conformational restraints”. It also prompted us to an investigation of applicability of Mosher arguments to sugar MPTA esters, in view of our interest in carbohydrate structure elucidation.     

Optical activity in the biaryl series

The relationship between the CD spectra of the chiral biaryls and their stereochemical configuration, as a function of the dihedral angle between the molecular planes of the aromatic moieties, has been investigated for biphenyl, 1,1′-binaphthyl, 1,1′-bianthryl and 9,9′-bianthryl in the exciton approximation and, for the 1,1′-binaphthyls, in the π-SCF approximation. Both methods provide unambiguous assignments of absolute configuration except for biaryls with a critical dihedral angle of π/2 in those with effective D_data2 chromophoric symmetry, or 100–110° in the case of the 1,1′-binaphthyls.     

Synthesis and crystal structures of 3D supramolecular compounds: [ M (4,4′-bipy)2(H2O)4] · (4,4′-bipy)2 · (3,5-daba)2 · 8H2O ( M =Zn,Mn)

Two new supramolecular compounds [M(4,4′-bipy)₂ (H₂O)₄] ·?(4,4′-bipy)₂ ·?(3,5-daba)₂ ·?8H₂O (M=Zn(1) or Mn(2), 4,4′-bipy =?4,4′-bipyridine, 3,5-daba =?3,5-diaminobenzoic acid anion) were synthesized and characterized by elemental analysis and X-ray crystal diffraction. In [M(4,4′-bipy)₂(H₂O)₄]²⁺, the M(II) is coordinated by two nitrogen atoms from two 4,4′-bipy molecules and four oxygen atoms from four waters to form an octahedral configuration. There exist uncoordinated 4,4′-bipy molecules, 3,5-diaminobenzolate counterions and water guests in the compounds. The 3D structures of the title supramolecular compounds are constructed by rich hydrogen bonds among [M(4,4′-bipy)₂(H₂O)₄]²⁺, uncoordinated 4,4′-bipy molecules, water molecules and 3,5-daba, containing a diverting hexa-member water ring.     

Synthesis,structure and selective luminescence sensing for iron(III) ions of a three‐dimensional zinc(II) (4,6)‐connected coordination network

Coordination polymers constructed from conjugated organic ligands and metal ions with a d¹⁰ electronic configuration exhibit intriguing properties for chemical sensing and photochemistry. A Zn^II‐based coordination polymer, namely poly[aqua(μ₆‐biphenyl‐3,3′,5,5′‐tetracarboxylato)(μ₂‐4,4′‐bipyridine)dizinc(II)], [Zn₂(C₁₆H₆O₈)(C₁₀H₈N₂)(H₂O)₂]_n or [Zn₂(m,m‐bpta)(4,4′‐bipy)(H₂O)₂]_n, was synthesized from a mixture of biphenyl‐3,3′,5,5′‐tetracarboxylic acid [H₄(m,m‐bpta)], 4,4′‐bipyridine (4,4′‐bipy) and Zn(NO₃)₂·6H₂O under solvothermal conditions. The title complex has been structurally characterized by IR spectroscopy, elemental analysis, single‐crystal X‐ray diffraction and powder X‐ray diffraction analysis, and features a μ₆‐coordination mode. The Zn^II ions adopt square‐pyramidal geometries and are bridged by two syn–syn carboxylate groups to form [Zn₂(COO)₂] secondary buildding units (SBUs). The SBUs are crosslinked by (m,m‐bpta)^4? ligands to produce a two‐dimensional grid‐like layer that exhibits a stair‐like structure along the a axis. Adjacent layers are linked by 4,4′‐bipy ligands to form a three‐dimensional network with a {4⁴.6¹⁰.8}{4⁴.6²} topology. In the solid state, the complex displays a strong photoluminescence and an excellent solvent stability. In addition, the luminescence sensing results indicate a highly selective and sensitive sensing for Fe³⁺ ions.     

Construction Of Two New 6‐connected Manganese(II) Metal Organic Frameworks via Isomeric Biphenyldicarboxylates Based on the Dinuclear Secondary Building Unit

Two coordination polymers, namely {[Mn(2,4′‐bpdc)(bimb)(H₂O)_0.5] · 0.5H₂O}_n ( 1 ) and [Mn(4,4′‐bpdc)(bimb)]_n · 2.5H₂O ( 2 ) [2,4′‐bpdc = biphenyl‐2,4′‐dicarboxylate, 4,4′‐bpdc = biphenyl‐4,4′‐dicarboxylate, and bimb = 1,4‐bis(1‐imidazol‐yl)‐2,5‐dimethyl benzene], were hydrothermally synthesized by reactions of manganese(II) salt with the rigid ligand 1,4‐bis(1‐imidazol‐yl)‐2,5‐dimethyl benzene and isomeric biphenyl dicarboxylate ligands. Complex 1 has an unusual 6‐connected three‐dimensional (3D) architecture with point symbol (4⁴.6¹¹). Complex 2 has also a 3D structure with two‐interpenetrated pcu topology with point symbol (4¹².6³). Structural comparisons show that the positions of the carboxylate groups in the ligand backbone play an important role in governing the structural topologies of these complexes.     

Total Synthesis of the Spermidine Alkaloid 13‐Hydroxyisocyclocelabenzine

A convergent total synthesis of 13‐hydroxyisocyclocelabenzine was developed. (3S)‐Methyl 3‐amino‐3‐phenylpropanoate ( 4 ) was used as the chiral building block. The 3,4‐dihydro‐4‐hydroxyisoquinolin‐1(2H)‐one derivative ( 5 ), the key fragment for the total synthesis, was prepared by a novel base‐catalyzed lactone‐lactam ring enlargement (Scheme 3). The resulting target C(13) epimers 3a / 3b from macrocyclization (Scheme 4) were separated by repeated flash chromatography. The absolute configuration of the synthetic alkaloid was determined by an X‐ray crystal‐structure analysis, which enabled us to determine the absolute configuration (9S,13R) for natural 3a with positive [α]_D.     

Some new protocols for the assignment of absolute configuration by NMR spectroscopy using chiral solvating agents and CDAs

The utility of enantiopure BINOL (1,10-Bi-2-naphthol), in a ternary ion-pair complex, which is obtained using a carboxylic acid and an organic base, as a versatile chiral solvating agent (CSA) has been demonstrated for chiral analysis and the absolute configuration assignment of hydroxy acids. Another protocol where the utility of NOBIN as a CSA has been developed for discrimination and absolute configuration assignment of acids, hydroxy acids and their derivatives with a distinct strategy where a third ingredient, p-toluenesulfonic acid (p-TsOH) serves as a linker. In addition some three component chiral derivatization protocols have been introduced, such as the use of 2-formylphenylboronic acid and enantiopure mandelic acid or a primary amine for the determination of the configuration of primary amines and hydroxy acids, respectively. A simple, rapid and highly efficient three component chiral derivatizing protocol has also been discussed which was developed for assigning the absolute configuration of chiral α-hydroxy acids and their derivatives, which involves the coupling of 2-formylphenylboronic acid with (R)-[1,1-binaphthalene]-2,2-diamine, and (S)-[1,1-binaphthalene]-2,2-diamine separately. In a few examples, the DFT based theoretical calculations have been carried out to determine the geometry optimized structures of the complexes.     

Synthesis, optical resolution and absolute configuration of inherently chiral calixarene carboxylic acids

Both enantiomers of inherently chiral calixarene carboxylic acids with ABCD substitution patterns have been prepared by the benzoylation of 25-propoxy-27-(R)-N-(α-phenylethyl)amidomethyloxycalix[4]arene followed by resolution of the diastereomers formed, monobromination of them and removal of the benzoyl and α-phenylethylamide auxiliary groups. The absolute configuration of the calixarenes obtained has been established by X-ray analysis. Preliminary study of the chiral recognition properties of calixarene carboxylic acid was performed.     

Chiral α-Amino Acid-Based NMR Solvating Agents

Four new chiral α-(nonafluoro-tert-butoxy)carboxylic acids were synthesized from naturally occurring α-amino acids (alanine, valine, leucine and isoleucine, respectively), and tested in ¹H- and ¹⁹F-NMR experiments as chiral NMR shift reagents. The NMR studies were carried out at room temperature, using CDCl₃ and C₆D₆ as solvents, and (RS)-α-phenylethylamine and (RS)-α-(1-naphthyl)ethylamine as racemic model compounds. To demonstrate the applicability of the reagents, the racemic drugs ketamine and prasugrel were also tested.     

A Highly Efficient Synthesis of Optically Active Ferrocenylethylamines via Hydride Reduction of Chiral Ferrocenylketimines

Due to using (R)‐ or (S)‐α‐methylbenzylamine as a chiral auxiliary, and low‐temperature regime for reduction of the intermediate ferrocenyl‐mono‐ or 1,1′‐bis‐ketimines, the corresponding secondary mono‐ or 1,1′‐bis‐amines were prepared with high diastereoselectivity. Removal of the α‐methylbenzyl group afforded the optically active primary mono‐ and bis‐ferrocenylethylamines in high yields. The absolute configuration of (R,R)‐ 3a and (S,S)‐ 3b was determined by X‐ray single crystal diffraction.     

An unusual three‐dimensional chiral threefold polycatenating network self‐assembled from inclined two‐dimensional (4,4) layer motifs

In the coordination compound poly[diaqua(μ₂‐4,4′‐bipyridine)(μ₂‐4‐carboxylatocinnamato)nickel(II)], [Ni(C₁₀H₆O₄)(C₁₀H₈N₂)(H₂O)₂]_n, both the 4‐carboxylatocinnamate and 4,4′‐bipyridine (4,4′‐bpy) ligands act as bidentate bridges, connecting the Ni^II centres in an octahedral coordination geometry into a two‐dimensional (4,4) layer. Each layer polycatenates two other identical layers, thus giving a rare 2D → 3D polycatenating network (2D and 3D are two‐ and three‐dimensional, respectively), with a mutually parallel arrangement of the layers. The chiral 4,4′‐bpy ligands link the Ni^II centres into chiral chains, thus introducing chirality into the layer and the resulting 3D network.