Interaction Study of Guest with Host in Clathrate Hydrate

Lattice dynamical simulations of noble gas hydrate structuresⅠandⅡhave been performed. Potential energies were investigated to study the influence of guest species on the stability of the hydrate structure.Results show that when the diameter of inclusion molecules is between 3(?)and 4.2(?),such as Ar and Kr,the critical role of the 5~(12)cage in the stabilization of hydrates becomes effective.For Xe hydrates SⅠand SⅡ,with the help of lattice dynamical calcnlations,the modes attributions are identified directly.We proposed the resonant effect of the fingerprint frequency at about 7 meV and 10 meV which arise from the coupling of Xe molecules in the 5~(12)cage with the host lattice.     

Semiconducting Clathrates Meet Gas Hydrates: Xe24[Sn136]

Semiconducting Group 14 clathrates are inorganic host–guest materials with a close structural relationship to gas hydrates. Here we utilize this inherent structural relationship to derive a new class of porous semiconductor materials: noble gas filled Group 14 clathrates (Ng_x[M₁₃₆], Ng=Ar, Kr, Xe and M=Si, Ge, Sn). We have carried out high‐level quantum chemical studies using periodic Local‐MP2 (LMP2) and dispersion‐corrected density functional methods (DFT‐B3LYP‐D3) to properly describe the dispersive host–guest interactions. The adsorption of noble gas atoms within clathrate‐II framework turned out to be energetically clearly favorable for several host–guest systems. For the energetically most favorable noble gas filled clathrate, Xe₂₄[Sn₁₃₆], the adsorption energy is ?52 kJ mol^?1 per guest atom at the LMP2/TZVPP level of theory, corresponding to ?9.2 kJ mol^?1 per framework Sn atom. Considering that a hypothetical guest‐free Sn clathrate‐II host framework is only 2.6 kJ mol^?1 per Sn atom less stable than diamond‐like α‐Sn, the stabilization resulting from the noble gas adsorption is very significant.     

Coordination of ScO+ and YO+ by multiple Ar, Kr, and Xe atoms in noble gas matrixes: a matrix isolation infrared spectroscopic and theoretical study

The combination of matrix isolation infrared spectroscopic and quantum chemical calculation results provide strong evidence that scandium and yttrium monoxide cations, ScO+ and YO+, coordinate multiple noble gas atoms in forming noble gas complexes. The results showed that ScO+ coordinates five Ar, Kr, or Xe atoms, and YO+ coordinates six Ar or Kr and five Xe atoms in solid noble gas matrixes. Hence, the ScO+ and YO+ cations trapped in solid noble gas matrixes should be regarded as the [ScO(Ng)5]+ (Ng = Ar, Kr, or Xe), [YO(Ng)6]+ (Ng = Ar or Kr) or [YO(Xe)5]+ complexes. Experiments with dilute krypton or xenon in argon or krypton in xenon produced new IR bands, which are due to the stepwise formation of the [ScO(Ar)(5-n)(Kr)n]+, [ScO(Kr)(5-n)(Xe)n]+ (n = 1-5), [YO(Ar)(6-n)(Kr)n]+ (n = 1-6), and [YO(Ar)(6-n)(Xe)n]+ (n = 1-4) complexes.     

Double clathrate hydrates of cross-linked tetrabutylammonium polyacrylate and noble gases at high pressures

Temperatures of hydrate decomposition were measured by means of the differential thermal analysis at a pressures up to 800–900 Mpa in the systems: cross-linked tetrabutylammonium polyacrylate–water and cross-linked tetrabutylammonium polyacrylate–water–noble gas (He, Ne, Ar, Kr, Xe). The effect of the deformation of D- cavities of the hydrates on the temperature of their decomposition is discussed on the basis of the experimental data.     

Insertion of noble gas atoms into cyanoacetylene: an ab initio and matrix isolation study

A computational and experimental matrix isolation study of insertion of noble gas atoms into cyanoacetylene (HCCCN) is presented. Twelve novel noble gas insertion compounds are found to be kinetically stable at the MP2 level of theory, including four molecules with argon. The first group of the computationally studied molecules belongs to noble gas hydrides (HNgCCCN and HNgCCNC), and we found their stability for Ng = Ar, Kr, and Xe. The HNgCCCN compounds with Kr and Xe have similar stability to that of previously reported HKrCN and HXeCN. The HArCCCN molecule seems to have a weaker H-Ar bond than in the previously identified HArF molecule. The HNgCCNC molecules are less stable than the HNgCCCN isomers for all noble gas atoms. The second group of the computational insertion compounds, HCCNgCN and HCCNgNC, are of a different type, and they also are kinetically stable for Ng = Ar, Kr, and Xe. Our photolysis and annealing experiments with low-temperature cyanoacetylene/Ng (Ng = Ar, Kr, and Xe) matrixes evidence the formation of two noble gas hydrides for Ng = Kr and Xe, with the strongest IR absorption bands at 1492.1 and 1624.5 cm(-1), and two additional absorption modes for each species are found. The computational spectra of HKrCCCN and HXeCCCN fit most closely the experimental data, which is the basis for our assignment. The obtained species absorb at quite similar frequencies as the known HKrCN and HXeCN molecules, which is in agreement with the theoretical predictions. No strong candidates for an Ar compound are observed in the IR absorption spectra. As an important side product of this work, the data obtained in long-term decay of KrHKr+ cations suggest a tentative assignment for the CCCN radical.     

The far from equilibrium structure of argon clusters doped with krypton or xenon

Heterogeneous clusters created by doping Ar host clusters with Kr or Xe are shown to have radically different structures from the mixed clusters of the same type created by co-expansion of Ar-Kr or Ar-Xe gas mixtures. In contrast to the co-expansion case, the doped mixed clusters can be produced with Kr or Xe on the surface and Ar in the bulk. With the doping technique it is thus possible to control the surface composition of a specific cluster. A study of the cluster properties as a function of the doping pressure is also reported for the case of Ar clusters doped with Xe. The clusters have been studied by means of synchrotron radiation based X-ray photoelectron spectroscopy.     

Matrix isolation infrared and ab initio studies on conformers of 3-fluoropropene

The infrared spectra of the cis and gauche conformers of 3-fluoropropene, CH₂CHCH₂F, were studied in Ne, Ar, Kr and Xe matrices. An infrared-induced cis to gauche rotamerization was found in Ar, Kr and Xe matrices. A thermal interconversion process was also found. Its direction was dependent upon the host, being the same as that of the IR process in Kr but reverse in Ar and Xe. In Ar and Xe matrices considerable site-splitting occurs in the IR spectra and a detailed analysis of the processes in different sites is given. An energy difference of 2.5±0.3 kJ mol⁻¹ between the cis and gauche species was obtained on assuming that the gas phase equilibrium between the conformers is trapped upon deposition. A slow dark process from cis to gauche conformer was observed in Kr matrices at temperatures above 15 K, possibly due to tunnelling. Ab initio calculations were carried out on 3-fluoropropene. The torsional potential energy curve and spectra of the conformers were calculated at the MP2(full)16-31G** level and were compared with the experimental results.     

How strong is the interaction between a noble gas atom and a noble metal atom in the insertion compounds MNgF (M=Cu and Ag, and Ng=Ar, Kr, and Xe)?

Ab initio molecular orbital calculations have been carried out to investigate the structure and the stability of noble gas insertion compounds of the type MNgF (M=Cu and Ag, and Ng=Ar, Kr, and Xe) through second order Moller-Plesset perturbation method. All the species are found to have a linear structure with a noble gas-noble metal bond, the distance of which is closer to the respective covalent bond length in comparison with the relevant van der Waals limit. The dissociation energies corresponding to the lowest energy fragmentation products, MF+Ng, have been found to be in the range of -231 to -398 kJ/mol. The respective barrier heights pertinent to the bent transition states (M-Ng-F bending mode) are quite high for the CuXeF and AgXeF species, although for the Ar and Kr containing species the same are rather low. Nevertheless the M-Ng bond length in MNgF compounds reported here is the smallest M-Ng bond ever predicted through any experimental or theoretical investigation, indicating strongest M-Ng interaction. All these species (except AgArF) are found to be metastable in their respective potential energy surface, and the dissociation energies corresponding to the M+Ng+F fragments have been calculated to be 30.1-155.3 kJ/mol. Indeed, in the present work we have demonstrated that the noble metal-noble gas interaction strength in MNgF species (with M=Cu and Ag, and Ng=Kr and Xe) is much stronger than that in NgMF systems. Bader's [Atoms in molecules-A Quantum Theory (Oxford University Press, Oxford, 1990)] topological theory of atoms in molecules (AIM) has been employed to explore the nature of interactions involved in these systems. Geometric as well as energetic considerations along with AIM results suggest a partial covalent nature of M-Ng bonds in these systems. The present results strengthen our earlier work and further support the proposition on the possibility of experimental identification of this new class of insertion compounds of noble gas atoms containing noble gas-noble metal bond.     

Noble gas-transition metal complexes: coordination of ScO+ by multiple Ar, Kr, and Xe atoms in noble gas matrixes

The combination of matrix isolation infrared spectroscopic and density functional calculation results provides strong evidence that the transition metal monoxide cation, ScO+, coordinates five noble gas atoms in forming the [ScO(Ng)5]+ (Ng = Ar, Kr, or Xe) complexes in noble gas matrixes.     

Effect of Guest–Host Hydrogen Bonding on the Structures and Properties of Clathrate Hydrates

To provide improved understanding of guest–host interactions in clathrate hydrates, we present some correlations between guest chemical structures and observations on the corresponding hydrate properties. From these correlations it is clear that directional interactions such as hydrogen bonding between guest and host are likely, although these have been ignored to greater or lesser degrees because there has been no direct structural evidence for such interactions. For the first time, single‐crystal X‐ray crystallography has been used to detect guest–host hydrogen bonding in structure II (sII) and structure H (sH) clathrate hydrates. The clathrates studied are the tert‐butylamine (tBA) sII clathrate with H₂S/Xe help gases and the pinacolone + H₂S binary sH clathrate. X‐ray structural analysis shows that the tBA nitrogen atom lies at a distance of 2.64 Å from the closest clathrate hydrate water oxygen atom, whereas the pinacolone oxygen atom is determined to lie at a distance of 2.96 Å from the closest water oxygen atom. These distances are compatible with guest–water hydrogen bonding. Results of molecular dynamics simulations on these systems are consistent with the X‐ray crystallographic observations. The tBA guest shows long‐lived guest–host hydrogen bonding with the nitrogen atom tethered to a water HO group that rotates towards the cage center to face the guest nitrogen atom. Pinacolone forms thermally activated guest–host hydrogen bonds with the lattice water molecules; these have been studied for temperatures in the range of 100–250 K. Guest–host hydrogen bonding leads to the formation of Bjerrum L‐defects in the clathrate water lattice between two adjacent water molecules, and these are implicated in the stabilities of the hydrate lattices, the water dynamics, and the dielectric properties. The reported stable hydrogen‐bonded guest–host structures also tend to blur the longstanding distinction between true clathrates and semiclathrates.     

Clathrate hydrates of hexagonal structure III at high pressures: Structures and phase diagrams

It was shown in this work that the clathrate hydrates of Hexagonal Structure III, formed in the ternary systems 1-methylpiperazine-help gas-water and iso-amyl alcohol-help gas-water are stable in a wide range of pressures. The decomposition curves of these hydrates were studied for the first time up to the pressures 1 GPa. Ar, Kr, Xe and CH₄ were utilized as the help gases. In a number of the systems studied, high pressure phases were revealed that presumably form due to the distortion of the corresponding low pressure hydrate structures.     

Theoretical Prediction on the New Types of Noble Gas Containing Anions OBONgO− and OCNNgO− (Ng=He,Ar, Kr and Xe)

The fluorine-less noble gas containing anions OBONgO⁻ and OCNNgO⁻ have been studied by correlated electronic structure calculation and density functional theory. The obtained energetics indicates that for Ng=Kr and Xe, these anions should be kinetically stable at low temperature. The molecular structures and electron density distribution suggests that these anions are stabilized by ion-induced dipole interactions with charges concentrated on the electronegative OBO and OCN groups. The current study shows that in addition to the fluoride ion, polyatomic groups with strong electronic affinities can also form stable noble gas containing anions of the type Y⁻…NgO.     

Structural contribution to the effect of hydrophobic hydration of noble gases

Within the concepts of structurally-thermodynamic characteristics of solvation and pseudo-chemical potential, the sample collection of the most authentic experimental data on solubility of gaseous He, Ne, Ar, Kr, Xe, and Rn in H₂O and D₂O is analysed at ≈0.1 MPa and T = 278–318 K. The conclusion is drawn that at deuteration of water molecules and also with increasing molar mass of noble gas, the relative contribution of effect of its hydrophobic hydration decreases. However in case of pass from lightweight noble gases (He, Ne, Ar) to heavy ones (Kr, Xe, Rn), structural transformations in their aqueous solutions become more expressed as a whole due to strengthening interaction between dissolved substance and solvent.     

A model of energy transfer to noble gas atoms due to forced resonance within a continuum of plasmon excitation by intense laser pulses

We have developed and applied a model of energy transfer to noble gas atoms due to a resonance mechanism within a continuum of plasmon oscillation induced by intense laser pulses. The model is based on a generalization to 3D of the 1D many-body RPA method of Tomonaga. Total cross sections for laser energy absorption, the saturation intensities for ionization, mean energy transfer and degree of ionization of several noble gases, Xe, Kr, Ar, Ne are obtained for λ = 193 nm and λ = 1064 nm for a short Gaussian laser pulse. Probability distribution of absorption of a given number of photons in Xe is also obtained for λ = 193 nm andI ₀ = 10¹⁴ W/cm². The results are consistent with the rapid energy transfer necessary for multiple ionization at these frequencies.     

Calorimetric study on pure and KOH-doped argon clathrate hydrates

Pure and KOH (x=1.3×10^?3)-doped argon clathrate hydrates were synthesized in an adiabatic high-pressure calorimetric cell from one mole of water and 200 MPa of Ar gas. The heat capacities of the hydrates were measured from 12 to 130 K. No anomaly was found in the pure sample but a glass transition considered to be related to a proton-configurational mode of the host hydrogen-bonded lattice was observed for the first time at 55 K in the doped sample. Comparison with the results on pure and KOH-doped tetrahydrofuran clathrate hydrates indicated that the thermodynamic properties of a hydrogen-bonded system depend on the kind of guest molecule. The heat capacity of argon in the hydrate cages was adequately analyzed with the one-dimensional Pöschl-Teller potential as used in the Ar-β-quinol clathrate and the addivity of heat capacities of the guest and host was shown to be valid in the temperature range 12–130 K.     

Relative sensitivity factors in direct current glow discharge mass spectrometry using Kr and Xe gas — Estimation of the role of Penning ionization

Relative sensitivity factors (RSF) (Fe=1) were determined for steel, aluminium and copper standard samples by direct current glow discharge mass spectrometry using Kr and Xe as discharge gas. In general, the RSF values in Kr and Xe were higher than in Ar; however for S and P in Kr gas and P, As and Se in Xe gas they were considerably lower. This decrease is related to the relative importance of the Penning ionization process in overall ionization of the sputtered species. The results showed the percentage of Penning ionization to account for 75.6–82.0% for Se, As and P and 64.2% for S.     

Investigating the nature of intermolecular and intramolecular bonds in noble gas containing molecules

This article presents a theoretical study on a number of selected noble gas containing systems of the general formula FNgR and NgR (Ng = He, Ne, Ar, Kr, Xe and R = CH₃, CN, CCH, BO, BNH, H, BeO, and AuF). The principal structures, bond energies, spectroscopic, and electronic properties of 28 noble gas containing molecules were investigated using density functional theory at the BMK level. Quantum theory of atoms in molecules, natural bond orbital, and several other analysis methods have been used to provide more insight into the nature of noble gas bonds. Although both F? Ng and Ng? R bonds in the investigated molecules are assigned to have partially covalent and partially electrostatic nature, the covalent character is dominant in Ng? R bonds. In the second part, the intermolecular interactions between FNgR molecules and hydrogen fluoride are overviewed with emphasis on the hydrogen bonding through the fluorine side of noble gas molecule with hydrogen of HF. The calculated interaction energies were found to decrease in magnitude going down the noble gas series. For all noble gases, the strongest hydrogen bond has been observed in the case R=CH₃. On the contrary, using R=CN in the FNgR moiety weakens the interaction strength. © 2014 Wiley Periodicals, Inc.     

Matrix isolation infrared spectroscopic and theoretical study of NgMO (Ng = Ar, Kr, Xe; M = Cr, Mn, Fe, Co, Ni) complexes

The matrix isolation infrared spectroscopic and quantum chemical calculation results indicate that late transition metal monoxides CrO through NiO coordinate one noble gas atom in forming the NgMO complexes (Ng = Ar, Kr, Xe; M = Cr, Mn, Fe, Co, Ni) in solid noble gas matrixes. Hence, the late transition metal monoxides previously characterized in solid noble gas matrixes should be regarded as the NgMO complexes, which were predicted to be linear. The M-Ng bond distances decrease, while the M-Ng binding energies increase from NgCrO to NgNiO. In contrast, the early transition metal monoxides, ScO, TiO, and VO, are not able to form similar noble gas atom complexes.     

Optimal covering of C(60) fullerene by rare gases

Putative global energy minima of clusters formed by the adsorption of rare gases on a C(60) fullerene molecule, C(60)X(N) (X=Ne, Ar, Kr, Xe; N ≤ 70), are found using basin-hopping global optimization in an empirical potential energy surface. The association energies per rare gas atom as a function of N present two noticeable minima for Ne and Ar and just one for Kr and Xe. The minimum with the smallest N is the deepest one and corresponds to an optimal packing monolayer structure; the other one gives a monolayer with maximum packing. For Kr and Xe, optimal and maximum packing structures coincide. By using an isotropic average form of the X-C(60) interaction, we have established the relevance of the C(60) surface corrugation on the cluster structures. Quantum effects are relevant for Ne clusters. The adsorption of these rare gases on C(60) follows patterns that differ significantly from the ones found recently for He by means of experimental and theoretical methods.