N-Heterocyclic Carbene Organocatalysis: With or Without Carbenes?

In this work the mechanism of the aldehyde umpolung reactions, catalyzed by azolium cations in the presence of bases, was studied through computational methods. Next to the mechanism established by Breslow in the 1950s that takes effect through the formation of a free carbene, we have suggested that these processes can follow a concerted asynchronous path, in which the azolium cation directly reacts with the substrate, avoiding the formation of the carbene intermediate. We hereby show that substituting the azolium cation, and varying the base or the substrate do not affect the preference for the concerted reaction mechanism. The concerted path was found to exhibit low barriers also for the reactions of thiamine with model substrates, showing that this path might have biological relevance. The dominance of the concerted mechanism can be explained through the specific structure of the key transition state, avoiding the liberation of the highly reactive, and thus unstable carbene lone pair, whereas activating the substrate through hydrogen-bonding interactions. Polar and hydrogen-bonding solvents, as well as the presence of the counterions of the azolium salts facilitate the reaction through carbenes, bringing the barriers of the two reaction mechanisms closer, in many cases making the concerted path less favorable. Thus, our data show that by choosing the exact components in a reaction, the mechanism can be switched to occur with or without carbenes.     

The Mechanism of the Intramolecular Hydrocarbyl Metathesis within a Planar Triruthenium Cluster: Combining Core Flexibility with Hydride Mobility

The transition metal catalysed formation and cleavage of C−C bonds is of utmost importance in synthetic chemistry. While most of the existing homogeneous catalysts are mononuclear, knowledge of the behaviour of polynuclear species is much more limited. By using computational methods, here we shed light into the mechanistic details of the thermally-induced isomerization of Cp*₃Ru₃(μ-H)₂(μ₃-η²-pentyne)(μ₃-pentylidyne) ( 2 ) into Cp*₃Ru₃(μ-H)₂(μ₃-η²-octyne)(μ₃-ethylidyne) ( 3 ), a process that involves the migration of a C₃ fragment between the hydrocarbyl ligands and across the plane formed by the three Ru centres. Our results show this to be a complex transformation that comprises of five individual rearrangements in an A→B→A→B→A order. Each so-called rearrangement A consists of the CH migration from the μ₃-η²-alkyne into the μ₃-alkylidine ligand in the other side of the Ru₃ plane. This process is facilitated by the cluster's ability to adopt open-core structures in which one Ru−Ru bond is broken and a new C−C bond is formed. In contrast, rearrangements B do not involve the formation or cleavage of C−C bonds, nor do they require the opening of the cluster core. Instead, they consist of the isomerization of the μ₃-η²-alkyne and μ₃-alkylidyne ligands on each side of the triruthenium plane into μ₃-alkylidyne and μ₃-η²-alkyne, respectively. Such transformation implies the migration of three H atoms within the hydrocarbyl ligands, and in this case, it is aided by the cluster's ability to behave as a H reservoir. All in all, this study highlights the plasticity of these Ru₃ clusters, whereby Ru−Ru, Ru−C, Ru−H, C−C, and C−H bonds are formed and broken with surprising ease.     

Functionalization of a Single C−F Bond of Trifluoromethylarenes Assisted by an ortho-Silyl Group Using a Trityl-Based All-in-One Reagent with Ytterbium Triflate Catalyst

Catalytic thiolation and azidation of a single C−F bond of trifluoromethylarenes were achieved assisted by an ortho-silyl group with all-in-one reagents to generate a trityl cation and nucleophiles. The reactions catalyzed by ytterbium triflate efficiently afforded a wide variety of difluoromethylenes avoiding the further C−F bond cleavage, by virtue of the mild conditions without the generation of a Brønsted acid.     

Fluorination Reactions at a Platinum Carbene Complex: Reaction Routes to SF3, S(=O)F and Fluorido Complexes

The electron-rich Pt complex [Pt(IMes)₂] (IMes: [1,3-bis(2,4,6-trimethylphenyl)-2-imidazolinylidine]) can be used as precursor for the syntheses of a variety of fluorido ligand containing compounds. The sulfur fluoride SF₄ undergoes a rapid oxidative addition at Pt⁰ to yield trans-[Pt(F)(SF₃)(IMes)₂]. A photolytic reaction of SF₆ at [Pt(IMes)₂] in the presence of IMes gave the fluorido complexes trans-[Pt(F)₂(IMes)₂] and trans-[Pt(F)(SF₃)(IMes)₂] along with trans-[Pt(F)(SOF)(IMes)₂] and trans-[Pt(F)(IMes’)(IMes)] (IMes’: cyclometalated IMes ligand), the latter being products produced by reaction with adventitious water. trans-[Pt(F)(SOF)(IMes)₂] and trans-[Pt(F)₂(IMes)₂] were synthesized independently by treatment of [Pt(IMes)₂] with SOF₂ or XeF₂. A reaction of [Pt(IMes)₂] with a HF source gave trans-[Pt(H)(F)(IMes)₂], and an intermediate bifluorido complex trans-[Pt(H)(FHF)(IMes)₂] was identified. Compound trans-[Pt(H)(F)(IMes)₂] converts in the presence of CsF into trans-[Pt(F)(IMes’)(IMes)].     

Theoretical Investigations on the Agostic Interactions of the Molybdenum and Manganese Complexes

The essential participation of agostic interactions in C−H bond activation, cyclometallation and other catalytic processes has been widely observed. To quantitatively evaluate the Mo−H−C agostic interaction in the Mo β/γ- agostomers [CpMo(CO)₂(PiPr₃)]⁺ ( Mo , 1 and Mo , 2 ) and the Mn−H−C agostic interaction in the Mn α/ϵ-agostomers [(C₆H₉]Mo(CO)₃] ( Mn , 1 and Mn , 2 ), the comprehensive density functional theory (DFT) theoretical investigations were performed. Results indicated that the Mo β-agostomer 1 is only favorable by 0.5 kcal mol⁻¹ than Mo γ-agostomer 2 , and the Gibbs barrier for their interconversion was 9.1 kcal mol⁻¹. A slightly higher Gibbs barrier of 12.7 kcal mol⁻¹ for the isomerization between the Mn α/ϵ-agostomers was also obtained. The relatively strong agostic interactions in Mo β-agostomer 1 and Mn α-agostomer 1 were further verified by the AIM (Atoms-In-Molecules) analyses and the NAdOs (natural adaptive orbitals) analyses. The findings on the agostic interaction presented in this study are believed to benefit the understandings of the agostic interaction involved catalytic processes and to promote the development of new organometallic complexes.     

Steric and Electronic Effects in Gold N-Heterocyclic Carbene Complexes Revealed by Computational Analysis

A computational analysis of a series of cationic and neutral gold imidazolylidene and benzimidizolylidene complexes is reported. The Bond Dissociation Energies of the various ligands in the complexes calculated at the PBE0-D3/def2-TZVP level of theory increase with increasing ligand volume, except for those of complexes containing t-butyl-substituted ligands, which are anomalously low particularly for the benzimidazolylidene species. Atoms in Molecules studies show the presence of a variety of weak intramolecular interactions, characterised by the presence of bond critical points with a range of different properties. Energy Decomposition Analysis and calculation of Electrostatic Surface Potentials indicate that some interactions are weakly attractive dispersion-type interactions, while others are repulsive. The octanol/water partition coefficients (log P values) were calculated as a measure of the lipophilicities of the complexes and were found to increase with increasing volume.     

Phosphorescent Cationic Heterodinuclear IrIII/MI Complexes (M=CuI,AuI) with a Hybrid Janus-Type N-Heterocyclic Carbene Bridge

A novel class of phosphorescent cationic heterobimetallic Ir^III/M^I complexes, where M^I=Cu^I ( 4 ) and Au^I ( 5 ), is reported. The two metal centers are connected by the hybrid bridging 1,3-dimesityl-5-acetylimidazol-2-ylidene-4-olate (IMesAcac) ligand that combines both a chelating acetylacetonato-like and a monodentate N-heterocyclic carbene site coordinated onto an Ir^III and a M^I center, respectively. Complexes 4 and 5 have been prepared straightforwardly by a stepwise site-selective metalation with the zwitterionic [(IPr)M^I(IMesAcac)] metalloproligand (IPr=1,3-(2,6-diisopropylphenyl)-2H-imidazol-2-ylidene) and they have been fully characterized by spectroscopic, electrochemical, and computational investigation. Complexes 4 and 5 display intense red emission arising from a low-energy excited state that is located onto the “Ir(C^N)” moiety featuring an admixed triplet ligand-centered/metal-to-ligand charge transfer (³IL/¹MLCT) character. Comparison with the benchmark mononuclear complexes reveals negligible electronic coupling between the two distal metal centers at the electronic ground state. The bimetallic systems display enhanced photophysical properties in comparison with the parental congeners. Noteworthy, similar non-radiative rate constants have been determined along with a two-fold increase of radiative rate, yielding brightly red-emitting cyclometalating Ir^III complexes. This finding is ascribed to the increased MLCT character of the emitting state in complexes 4 and 5 due to the smaller energy gap between the ³IL and ¹MLCT manifolds, which mix via spin–orbit coupling.     

Assessing the Effect of Dopants on the C−H Activation Activity of γ-Al2O3 using First-Principles Calculations

In recent years, the high availability of methane in the shale gas reserves has raised significant interest in its conversion to high-value chemicals but this process is still not commercially viable. Metal oxides, due to their surface heterogeneity and the presence of Lewis acidic and basic site pairs are known to facilitate the activation of C−H bonds of methane. In this work, we investigate the C−H bond activation of methane on pristine and doped γ-Al₂O₃ clusters using density functional theory (DFT) calculations. Our results demonstrate that the polar pathway is energetically preferred over the radical pathway on these systems. We found that the metal dopants (boron and gallium) not only alter the catalytic activity of dopant sites but this effect is more pronounced on some of the adjacent sites (non-local). Among the selected dopants, gallium greatly improves the catalytic activity on most of the site pairs (including most active and least active) of pristine γ-Al₂O₃. Additionally, we identified a correlation between H₂ binding energies and the C−H activation free energies on Ga-doped γ-Al₂O₃.     

Synthesis of Diverse Aromatic Ketones through C−F Cleavage of Trifluoromethyl Group

An efficient synthetic method of aromatic ketones through C−F cleavage of trifluoromethyl group is disclosed. The high functional group tolerance of the transformation and the remarkable stability of trifluoromethyl group in various reactions enabled multi-substituted aromatic ketone synthesis in an efficient route involving useful transformations such as ortho-lithiation, aryne chemistry, and cross-couplings.     

Experimental and Theoretical Study of NiII- and PdII-Promoted Double Geminal C(sp3)−H Bond Activation Providing Facile Access to NHC Pincer Complexes: Isolated Intermediates and Mechanism

We report the first examples of metal-promoted double geminal activation of C(sp³)−H bonds of the N−CH₂−N moiety in an imidazole-type heterocycle, leading to nickel and palladium N-heterocyclic carbene complexes under mild conditions. Reaction of the new electron-rich diphosphine 1,3-bis((di-tert-butylphosphaneyl)methyl)-2,3-dihydro-1H-benzo[d]imidazole ( 1 ) with [PdCl₂(cod)] occurred in a stepwise fashion, first by single C−H bond activation yielding the alkyl pincer complex [PdCl(PC ^HP)] ( 3 ) with two trans phosphane donors and a covalent Pd−C bond. Activation of the C−H bond of the resulting α-methine C H−M group occurred subsequently when 3 was treated with HCl to yield the NHC pincer complex [PdCl(PC^NHCP)]Cl ( 2 ). Treatment of 1 with [NiBr₂(dme)] also afforded a NHC pincer complex, [NiBr(PC^NHCP)]Br ( 6 ), but the reactions leading to the double geminal C−H bond activation of the N−CH₂−N group were too fast to allow identification or isolation of an intermediate analogous to 3 . The determination of six crystal structures, the isolation of reaction intermediates and DFT calculations provided the basis for suggesting the mechanism of the stepwise transformation of a N−CH₂−N moiety in the N−C^NHC−N unit of NHC pincer complexes and explain the key differences observed between the Pd and Ni chemistries.     

Investigations on Novel 1,3-Diazetidine Based Four-Membered N-Heterocyclic Carbenes

Attempts towards the synthesis of two novel four-membered 1,3-diazetidine based N-heterocyclic carbenes (NHCs) containing an organic backbone with a carbonyl functionality were undertaken. These carbenes cannot be isolated but the respective carbene dimers are obtained in quantitative yield which undergo a degradation and rearrangement sequence upon thermal exposure. Some of the species involved in these thermal reactions could be isolated and characterized, others were observed by mass spectrometric experiments. Ab initio and density functional theory (DFT) calculations provide a mechanistic rationale for the experimental observations. Since dimerization is strongly favored, classic carbene trapping reactions remain a goal to achieve.     

A Stable Dimer of SiS2 Arranged between Two Carbene Molecules

The Me‐cAAC:‐stabilized dimer of silicon disulfide (SiS₂) has been isolated in the molecular form as (Me‐cAAC:)₂Si₂S₄ ( 2 ) at room temperature [Me‐cAAC:=cyclic alkyl(amino) carbene]. Compound 2 has been synthesized from the reaction of (Me‐cAAC:)₂Si₂ with elemental sulfur in a 1:4 molar ratio under oxidative addition. This is the smallest molecular unit of silicon disulfide characterized by X‐ray crystallography, electron ionization mass spectrometry, and NMR spectroscopy. Structures with three sulfur atoms arranged around a silicon atom are known; however, 2 is the first structurally characterized silicon–sulfur compound containing one terminal and two bridging sulfur atoms at each silicon atom. Compound 2 shows no decomposition after storing for three months in an inert atmosphere at ambient temperature. The bonding of 2 has been further studied by theoretical calculations.     

Versatile Reaction Pathways of 1,1,3,3,3-Pentafluoropropene at Rh(I) Complexes [Rh(E)(PEt3)3] (E=H,GePh3, Si(OEt)3, F,Cl): C-F versus C-H Bond Activation Steps

The reaction of the rhodium(I) complexes [Rh(E)(PEt₃)₃] (E=GePh₃ ( 1 ), H ( 6 ), F ( 7 )) with 1,1,3,3,3-pentafluoropropene afforded the defluorinative germylation products Z/E-2-(triphenylgermyl)-1,3,3,3-tetrafluoropropene and the fluorido complex [Rh(F)(CF₃CHCF₂)(PEt₃)₂] ( 2 ) together with the fluorophosphorane E-(CF₃)CH=CF(PFEt₃). For [Rh(Si(OEt)₃)(PEt₃)₃] ( 4 ) the coordination of the fluoroolefin was found to give [Rh{Si(OEt)₃}(CF₃CHCF₂)(PEt₃)₂] ( 5 ). Two equivalents of complex 2 reacted further by C−F bond oxidative addition to yield [Rh(CF=CHCF₃)(PEt₃)₂(μ-F)₃Rh(CF₃CHCF₂)(PEt₃)] ( 9 ). The role of the fluorido ligand on the reactivity of complex 2 was assessed by comparison with the analogous chlorido complex. The use of complexes 1 , 4 and 6 as catalysts for the derivatization of 1,1,3,3,3-pentafluoropropene provided products, which were generated by hydrodefluorination, hydrometallation and germylation reactions.     

Unexpected Vulnerability of DPEphos to C−O Activation in the Presence of Nucleophilic Metal Hydrides

C−O bond activation of DPEphos occurs upon mild heating in the presence of [Ru(NHC)₂(PPh₃)₂H₂] (NHC=N-heterocyclic carbene) to form phosphinophenolate products. When NHC=IEt₂Me₂, C−O activation is accompanied by C−N activation of an NHC ligand to yield a coordinated N-phosphino-functionalised carbene. DFT calculations define a nucleophilic mechanism in which a hydride ligand attacks the aryl carbon of the DPEphos C−O bond. This is promoted by the strongly donating NHC ligands which render a trans dihydride intermediate featuring highly nucleophilic hydride ligands accessible. C−O bond activation also occurs upon heating cis-[Ru(DPEphos)₂H₂]. DFT calculations suggest this reaction is promoted by the steric encumbrance associated with two bulky DPEphos ligands. Our observations that facile degradation of the DPEphos ligand via C−O bond activation is possible under relatively mild reaction conditions has potential ramifications for the use of this ligand in high-temperature catalysis.     

Mapping Catalyst–Solvent Interplay in Competing Carboamination/Cyclopropanation Reactions

Group 9 metals, in particular Rh^III complexes with cyclopentadienyl ligands, are competent C−H activation catalysts. Recently, a Cp*Rh^III-catalyzed reaction of alkenes with N-enoxyphthalimides showed divergent outcome based on the solvent, with carboamination favored in methanol and cyclopropanation in 2,2,2-trifluoroethanol (TFE). Here, we create selectivity and activity maps capable of unravelling the catalyst-solvent interplay on the outcome of these competing reactions by analyzing 42 cyclopentadienyl metal catalysts, Cp^XM^III (M=Co, Rh, Ir). These maps not only can be used to rationalize previously reported experimental results, but also capably predict the behavior of untested catalyst/solvent combinations as well as aid in identifying experimental protocols that simultaneously optimize both catalytic activity and selectivity (solutions in the Pareto front). In this regard, we demonstrate how and why the experimentally employed Cp*Rh^III catalyst represents an ideal choice to invoke a solvent-induced change in reactivity. Additionally, the maps reveal the degree to which even perceived minor changes in the solvent (e. g., replacing methanol with ethanol) influence the ratio of carboamination and cyclopropanation products. Overall, the selectivity and activity maps presented here provide a generalizable tool to create global pictures of anticipated reaction outcome that can be used to develop new experimental protocols spanning metal, ligand, and solvent space.     

Mechanistic Insights into the Regio- and Stereoselectivities of Testosterone and Dihydrotestosterone Hydroxylation Catalyzed by CYP3A4 and CYP19A1

The hydroxylation of nonreactive C−H bonds can be easily catalyzed by a variety of metalloenzymes, especially cytochrome P450s (P450s). The mechanism of P450 mediated hydroxylation has been intensively studied, both experimentally and theoretically. However, understanding the regio- and stereoselectivities of substrates hydroxylated by P450s remains a great challenge. Herein, we use a multi-scale modeling approach to investigate the selectivity of testosterone (TES) and dihydrotestosterone (DHT) hydroxylation catalyzed by two important P450s, CYP3A4 and CYP19A1. For CYP3A4, two distinct binding modes for TES/DHT were predicted by dockings and molecular dynamics simulations, in which the experimentally identified sites of metabolism of TES/DHT can access to the catalytic center. The regio- and stereoselectivities of TES/DHT hydroxylation were further evaluated by quantum mechanical and ONIOM calculations. For CYP19A1, we found that sites 1β, 2β and 19 can access the catalytic center, with the intrinsic reactivity 2β>1β>19. However, our ONIOM calculations indicate that the hydroxylation is favored at site 19 for both TES and DHT, which is consistent with the experiments and reflects the importance of the catalytic environment in determining the selectivity. Our study unravels the mechanism underlying the selectivity of TES/DHT hydroxylation mediated by CYP3A4 and CYP19A1 and is helpful for understanding the selectivity of other substrates that are hydroxylated by P450s.     

Skeletal Transformation Triggered by C−F Bond Activation after Photochemical Rearrangement of Fluorinated [7]Helicenes

Tri- and tetra-fluorinated [7]helicenes are photolabile and undergo a double fluorine atom transfer. Herein, we show that the transferred product further undergoes a skeletal transformation on silica gel. The transformation begins with activation of the allylic C−F bond on the silanol surface. Then, the resulting carbocation readily undergoes a regioselective nucleophilic aromatic substitution with water, depending on the position of the fluorine substituents. Hexafluoro-2-propanol also activated the allylic C−F bond and acted as a nucleophile. These findings support the generation of a highly reactive cationic electrophilic intermediate in the successive transformations involving fluorine atoms.     

Transition-Metal-Free Aryl–Aryl Cross-Coupling: C−H Arylation of 2-Naphthols with Diaryliodonium Salts

Transition-metal-free regioselecitive C−H arylation of 2-naphthols with diaryliodonium salts has been developed. The reaction proceeds under very simple experimental conditions and affords a range of products with various substitution patterns. The method allows for the incorporation of electron-deficient aryls, which complements well currently existing metal-free aryl–aryl cross-couplings of phenols that have been so far restricted to the introduction of electron-rich aryl moieties. The mechanism of the reaction was studied by means of DFT calculations, demonstrating that the C−C bond formation occurs via a dearomatization of 2-naphthol substrate, followed by a subsequent rearomatization by tautomerization. The computations show that the use of a low polarity solvent and an insoluble inorganic base is key to securing the high selectivity of the C−C coupling over a competing C−O arylation pathway, by preventing the incipient deprotonation of 2-naphthol.     

Understanding the Role of Solvents and Spin–Orbit Coupling in an Oxygen-Assisted SN2-Type Oxidative Transmetalation Reaction

The aerial oxidation of Pd^II to Pd^IV has emerged as an integral component of sustainable catalytic C−H functionalization processes. However, a proper understanding of the factors that control the viability of this oxidative process remains elusive. An investigation of the intricate mechanism of the transmetalation reaction of the aerial oxidative transformation of [(Me₃tacn)Pd^IIMe₂] (Me₃tacn=N,N′,N′′-trimethyl-1,4,7-triazacyclononane) to [(Me₃tacn)Pd^IVMe₃]⁺ has been conducted by using DFT, along with multireference methods, such as second-order n-electron valence-state perturbation theory (NEVPT2) with complete active space self-consistent field theory (CASSCF). The present endeavor predicts that the thermodynamics and kinetics of the oxygen activation step are primarily dictated by the polarity of the solvents, which determine the amount of charge transfer to the oxygen molecule from the Pd^II center. Additionally, it is observed that the presence of a protic solvent has a significant effect on the spin–orbit coupling term at the minimum energy crossing point of the triplet and singlet surfaces. Moreover, it is shown that the intermetal ligand-transfer phenomenon is an important instance of an oxygen-assisted S_N2 reaction.