Insights into the cycloaddition reaction mechanism between ketenimine and unsaturated hydrocarbon: A theoretical study

The cycloaddition reaction mechanisms between interstellar molecule ketenimine and unsaturated hydrocarbon (ethyne and ethylene) have been systematically investigated employing the second-order Møller-Plesset perturbation theory (MP2) method. Geometry optimizations and vibrational analyses have been performed for the stationary points on the potential energy surfaces of the system. The calculated results show that it can be produced the five-membered cyclic carbene intermediates through pericyclic reaction processes between ketenimine and ethyne (or ethylene). For the reaction between ketenimine and ethyne, through the following H-transferred processes, carbene intermediate can be isomerized to the pyrrole compounds. For the reaction between ketenimine and ethylene, carbene intermediate can be isomerized to the pyrroline compounds. The present study is helpful to understand the reactivity of nitrogenous cumulene ketenimine and the formation of prebiotic species in interstellar space.     

Mechanism of trifl uoromethylation reactions with well-defi ned NHC copper trifl uoromethyl complexes and iodobenzene: A computational exploration

Computational calculation was performed to investigate the mechanism of trifluoromethylation reactions of iodobenzene with well-defined N-heterocyclic carbene(NHC)-supported Cu~1 trifluoromethyl complexes.Four proposed reaction pathways,namely σ-bond metathesis(BM),concerted oxidative addition-reductive elimination(OARE),iodine atom transfer(1AT) and single-electron transfer(SET),have been computed by density functional theory(DFT).The result indicated that the concerted OARE mechanism is favored among the four reaction pathways,suggesting the trifluoromethylation may occur via concerted OARE mechanism involving Ar-X oxidative addition to the Cu(I) center as the rate determining step.     

A theoretical study on the mechanism of the addition reaction between carbene and epoxyethane

The mechanism of addition reaction between carbene and epoxyethane has been investigated employing the MP2 and B3LYP/6-311+G* levels of theory. Geometry optimization, vibrational analysis, and energy property for the involved stationary points on the potential energy surface have been calculated. Based on the calculated results at the MP2/6-311+G* level of theory, it can be predicted that there are two reaction mechanisms (1) and (2). In the first reaction carbene attacks the atom O of epoxyethane to form an intermediate 1a (IM1a), which is a barrier-free exothermic reaction. Then, IM1a can isomerize to IM1b via a transition state 1a (TS1a), where the potential barrier is 48.6 kJ/mol. Subsequently, IM1b isomerizes to a product epoxypropane (Pro1) via TS1b with a potential barrier of 14.2 kJ/mol. In the second carbene attacks the atom C of epoxyethane firstly to form IM2 via TS2a. Then IM2 isomerizes to a product allyl alcohol (Pro2) via TS2b with a potential barrier of 101.6 kJ/mol. Correspondingly, the reaction energies for the reactions (1) and (2) are −448.4 and −501.6 kJ/mol, respectively. Additionally, the orbital interactions are also discussed for the leading intermediate. The results based on the B3LYP/6-311+G* level of theory are paralleled to those on the MP2/6-311+G* level of theory. Furthermore, the halogen and methyl substituent effects of H₂C: on the two reaction mechanisms have been investigated. The calculated results indicate that the introductions of halogen or methyl make the addition reaction difficult to proceed.     

Understanding the Influence of Donor-Acceptor Diazo Compounds on the Catalyst Efficiency of B(C6F5)3 Towards Carbene Formation

Diazo compounds have been largely used as carbene precursors for carbene transfer reactions in a variety of functionalization reactions. However, the ease of carbene generation from the corresponding diazo compounds depends upon the electron donating/withdrawing substituents either side of the diazo functionality. These groups strongly impact the ease of N₂ release. Recently, tris(pentafluorophenyl)borane [B(C₆F₅)₃] has been shown to be an alternative transition metal-free catalyst for carbene transfer reactions. Herein, a density functional theory (DFT) study on the generation of carbene species from α-aryl α-diazocarbonyl compounds using catalytic amounts of B(C₆F₅)₃ is reported. The significant finding is that the efficiency of the catalyst depends directly on the nature of the substituents on both the aryl ring and the carbonyl group of the substrate. In some cases, the boron catalyst has negligible effect on the ease of the carbene formation, while in other cases there is a dramatic reduction in the activation energy of the reaction. This direct dependence is not commonly observed in catalysis and this finding opens the way for intelligent design of this and other similar catalytic reactions.     

Spatial distributions and interstellar reaction processes

Methyl formate presents a challenge for the conventional chemical mechanisms assumed to guide interstellar organic chemistry. Previous studies of potential formation pathways for methyl formate in interstellar clouds ruled out gas-phase chemistry as a major production route, and more recent chemical kinetics models indicate that it may form efficiently from radical-radical chemistry on ice surfaces. Yet, recent chemical imaging studies of methyl formate and molecules potentially related to its formation suggest that it may form through previously unexplored gas-phase chemistry. Motivated by these findings, two new gas-phase ion-molecule formation routes are proposed and characterized using electronic structure theory with conformational specificity. The proposed reactions, acid-catalyzed Fisher esterification and methyl cation transfer, both produce the less stable trans-conformational isomer of protonated methyl formate in relatively high abundance under the kinetically controlled conditions relevant to interstellar chemistry. Gas-phase neutral methyl formate can be produced from its protonated counterpart through either a dissociative electron recombination reaction or a proton transfer reaction to a molecule with larger proton affinity. Retention (or partial retention) of the conformation in these neutralization reactions would yield trans-methyl formate in an abundance that exceeds predictions under thermodynamic equilibrium at typical interstellar temperatures of ≤100 K. For this reason, this conformer may prove to be an excellent probe of gas-phase chemistry in interstellar clouds. Motivated by new theoretical predictions, the rotational spectrum of trans-methyl formate has been measured for the first time in the laboratory, and seven lines have now been detected in the interstellar medium using the publicly available PRIMOS survey from the NRAO Green Bank Telescope.     

Theoretical investigations of the reactivities of cationic six-membered carbene analogues of group 14 elements

The potential energy surfaces for the chemical reactions of cationic six-membered group 14 heavy carbene species have been studied using density functional theory (B3LYP/LANL2DZ) and CCSD (CCSD/LANL2DZ//B3LYP/LANL2DZ) methods. Five six-membered group 14 cationic heavy carbene species, [HC(CMeNPh)2E:](+), where E = C, Si, Ge, Sn, and Pb, have been chosen as model reactants in this work. Also, four kinds of chemical reaction, C-H bond insertion, multiple bond cycloaddition, dimerization, and O-H bond insertion, have been used to study the chemical reactivities of these group 14 cationic carbene species. Basically, our present theoretical work predicts that the larger the angle NEN bond angle and the smaller the singlet-triplet splitting of the carbene, the lower its activation barriers will be and, in turn, the more rapid are its chemical reactions with other species. Moreover, the theoretical investigations suggest that the relative carbenic reactivity decreases in the order C > Si > Ge > Sn > Pb. That is, the heavier the group 14 atom (E), the more stable is its cationic carbene toward chemical reaction. As a result, we predict that the cationic six-membered group 14 carbene species (E = C, Si, Ge, Sn, and Pb) should be stable, readily synthesized, and isolated at room temperature. Our computational results are in good agreement with the available experimental observations. Furthermore, the singlet-triplet energy splitting of the carbene, as described in the configuration mixing model attributed to the work of Pross and Shaik, can be used as a diagnostic tool to predict its reactivities. The results obtained allow a number of predictions to be made.     

亚烷基卡宾与丙烯环加成反应机理的理论研究

用二阶微扰理论研究了单重态亚烷基卡宾与丙烯环加成反应的机理，采用 MP2/6-31G~*方法计算了势能面上各驻点的构型参数、振动频率和能量。根据所得 势能面上的能量数据可以预言，反应（1）的a途径和反应（2）的b途径将是单重态 亚烷基卡宾与丙烯环加成反应的两条相互竞争的主反应通道，两反应途径均由两步 组成，(I)两反应物分别生成了富能中间体INT1a和INT2b，它们均是无势垒的放热 反应，放出的能量分别为60.28和26.33kJ·mol~(-1).(II)中间体INT1a和INT2b分 别通过过渡态TS1a和TS2b异构化为三元环产物P1和四元环产物P2，其势垒分别为 16.43和12.73kJ·mol~(-1)。     

卡宾与氢氰酸加成反应机理的量子化学研究

用MNDO法研究单线态卡宾与氢氰酸的反应途径,通过两条不同反应途径的能量比较,得到了此反应可行的反应机理。     

Pd-catalyzed inter- and intramolecular carbene transfer from group 6 metal-carbene complexes.

The use of group 6 metal-carbene complexes in inter- and intramolecular carbene transfer reactions has been studied. Thus, pentacarbonyl[(aryl)(methoxy)carbene]chromium(0) and tungsten complexes, 10, efficiently dimerize at room temperature in the presence of diverse Pd(0) and Pd(II)/Et(3)N catalysts. The effect of additives (PPh(3), AsPh(3), or SbPh(3)) on the nature and the isomeric ratio of the reaction products is negligible. The nature of the reaction products is more catalyst-dependent for metal carbenes 12 bearing alkyl groups attached to the carbene carbon. In these cases, either carbene ligand dimerization or beta-hydrogen elimination reactions are observed, depending on the catalyst. The carbene ligand dimerization reaction can be used to prepare conjugated polyenes, including those having metal moieties at both ends of the polyene system, as well as enediyne derivatives. The intramolecular carbene ligand dimerization of chromium bis-carbene complexes 28 and 30 allows the preparation of mono- and bicyclic derivatives, with ring sizes from six to nine members. For bis-carbene derivatives the beta-hydrogen elimination reaction is inhibited, provided that both metal centers are tethered by an o-xylylene group. Other alkyl complexes 32 form new mononuclear carbene complexes 37 or decompose to complex reaction mixtures. The results obtained in these reactions may be explained by transmetalation from Cr(0) to Pd(0) and the intermediacy of Pd-carbene complexes. Aminocarbene-chromium(0) complexes 15, need harsher reaction conditions to transfer the carbene ligand, and this transfer occurs only in the presence of deactivated olefins. The corresponding insertion/hydrolysis products 48 resulted in these cases. A catalytic cycle involving transmetalation from a chromacyclobutane to a palladacyclobutane is proposed to explain these results.     

Theoretical Study on the Mechanism of the Cycloaddition Reaction between Alkylidene Carbene and Ethylene

The mechanism of cycloaddition reaction between singlet alkylidene carbene and ethylene has been investigated with second-order Moller-Plesset perturbation theory (MP2). By using 6-31 G^* basis, geometry optimization, vibrational analysis and energetics have been calculated for the involved stationary points on the potential energy surface. The results show that the title reaction has two major competition channels. An energy-rich intermediate (INT) is firstly formed between alkylidene carbene and ethylene through a barrier-free exothermic reaction of 63.62 kJ/mol, and the intermediate then isomerizes to a three-membered ring product (P 1) and a four-memberd ring product (P2) via transition state TS1 and TS2, in which energy barriers are 47.00 and 51.02 kJ/mol, respectively. P1 is the main product.     

单态卡宾与臭氧反应机理的量子化学研究

为了研究单态卡宾与臭氧反应机理,本文采用密度泛函理论Gaussian-3方法(G3B3)优化了反应物、中间体、过渡态和产物的几何构型。探讨了单态卡宾与臭氧反应可能途径,并通过频率分析对过渡态和中间体进行了验证,研究结果表明：单态卡宾与臭氧反应有两条反应通道,分别具有亲核反应和亲电反应特征,相对而言亲核反应通道较易发生,且为强放热反应。     

Can cytosine, thymine and uracil be formed in interstellar regions? A theoretical study

This theoretical study investigates possible synthetic routes to cytosine, uracil and thymine in the gas phase from precursor molecules that have been detected in interstellar media. Studies at the CCSD(T)/6-311++G(d,p)//B3LYP/6-311++G(d,p) level of theory suggest that: The reactions between :CCCNH and :CCCO with monosolvated urea may constitute viable interstellar syntheses of cytosine and uracil. No low energy equilibration between cytosine and uracil has been demonstrated. The interaction of :CH(2) with the 5 C-H bond of uracil may form thymine in an energetically favourable reaction, but competing reactions where :CH(2) reacts with double bonds and other CH and NH bonds of uracil, reduce the effectiveness of this synthesis. The reaction between the hydrated propional enolate anion and isocyanic acid may produce thymine, in a reaction sequence where ΔG(reaction)(298 K) is -22 kJ mol(-1) and the maximum energy requirement (barrier to the first transition state) is only 47 kJ mol(-1).     

Theoretical study on the mechanism of N-heterocyclic carbene catalyzed transesterification reactions

The mechanism of N-heterocyclic carbene (NHC) catalyzed transesterification reactions have been studied using density functional theory. Our study shows that the role of NHC is to assist proton transfer from alcohol to the carbonyl oxygen, forming the tetrahedral intermediate, which then decomposes to the acylated product. Our predicted activation energies are in fine agreement with the observed reaction rates. An alternative approach, which uses the tetrahedral intermediate as the transition state mimic, provides satisfactory predictions.     

Intramolecular Interception of the Remote Position of Vinylcarbene Silver Complex Intermediates by C(sp3)−H Bond Insertion

The trapping of the elusive vinylogous position of a vinyl carbene with an aliphatic C(sp³)−H bond has been achieved for the first time during a silver-catalyzed carbene/alkyne metathesis (CAM) process. A Tp^x-containing silver complex first promotes the generation of a donor-acceptor silver carbene which triggers CAM, generating a subsequent donor-donor vinyl silver carbene species, which then undergoes a selective vinylogous C(sp³)−H bond insertion, leading to the synthesis of a new family of benzoazepines. Density functional theory (DFT) calculations unveil the reaction mechanism, which allows proposing that the C−H bond insertion reaction takes place in a stepwise manner, with the hydrogen shift being the rate determining step.     

Hydrogen tunnelling influences the isomerisation of some small radicals of interstellar importance. A theoretical investigation

Hydrogen atom isomerisations within five radical systems (i.e., CH(3)˙NH/˙CH(2)NH; CH(3)O˙/˙CH(2)OH; ˙CH(2)SH/CH(3)S˙; CH(3)CO(2)˙/˙CH(2)CO(2)H; and HOCH(2)CH(2)O˙/HO˙CHCH(2)OH) have been studied via quantum-mechanical hydrogen tunnelling through reaction barriers. The reaction rates including hydrogen tunnelling effects have been calculated for these gas phase reactions at temperatures from 300 K to 0 K using Wenzel-Kramers-Brillouin (WKB) and Eckart methods. The Eckart method has been found to be unsatisfactory for the last two systems listed above, because it significantly underestimates the width of the reaction barriers for the interconversions. The calculations at all-electron CCSD(T)/CBS level of theory indicate that the barriers for all reactions (forward and reverse) are greater than 100 kJ mol(-1), meaning that the chemical reactivity of the reactants is limited in the absence of hydrogen tunnelling. Hydrogen tunnelling, in some cases, enhance rates of reaction by more than 100 orders of magnitude at low temperature, and around 2 orders of magnitude at room temperature, compared to results obtained from canonical variational transition state theory. Tunnelling corrected reaction rates suggest that some of these isomerisation reactions may occur in interstellar media.     

Transmetalation reactions from Fischer carbene complexes to late transition metals: a DFT study

Transmetalation reactions from chromium(0) Fischer carbene complexes to late-transition-metal complexes (palladium(0), copper(I), and rhodium(I)) have been studied computationally by density functional theory. The computational data were compared with the available experimental data. In this study, the different reaction pathways involving the different metal atoms have been compared with each other in terms of their activation barriers and reaction energies. Although the reaction profiles for the transmetalation reactions to palladium and copper are quite similar, the computed energy values indicate that the process involving palladium as catalyst is more favorable than that involving copper. In contrast to these transformations, which occur via triangular heterobimetallic species, the transmetalation reaction to rhodium leads to a new heterobimetallic species in which a carbonyl ligand is also transferred from the Fischer carbene to the rhodium catalyst. Moreover, the structure and bonding situation of the so far elusive heterobimetallic complexes are briefly discussed.     

Theoretical Study of the Cycloaddition Reaction of a Tungsten‐Containing Carbonyl Ylide

The [3+2] cycloaddition reaction of a tungsten‐containing carbonyl ylide with methyl vinyl ether and the insertion reactions of the nonstabilized carbene complex intermediates produced have been investigated through the use of B3LYP density functional theory. The [3+2] cycloaddition reaction of the tungsten‐containing carbonyl ylide has been proven to proceed concertedly, reversibly, and with high endo selectivity. The intermolecular Si? H insertion reactions of the carbene complex intermediates have been proven to be favored over the intramolecular C? H insertion, in good agreement with experimental results. Moreover, the kinetic endo/exo ratio of the [3+2] cycloaddition reaction has been shown to determine the endo/exo selectivity of the Si? H insertion products. In addition, secondary orbital interactions involving the benzene ring and the carbonyl ligand on the metal center have turned out to strongly influence the high endo selectivity of the [3+2] cycloaddition reaction with methyl vinyl ether.     

Statistical modelling of NH+/ND+ + H2/HD/D2 branching ratios

In this work we study hydrogen isotope fractionation along the proposed gas-phase ammonia formation pathway at temperatures relevant to interstellar modelling. Specifically we study the isotopically substituted variants of the NH(+) + H(2) reaction, for which the primary product is NH(2)(+) + H. Adiabatic capture theory calculations have been performed for the association reaction. A new potential-energy surface has been determined for the NH(2)(+) product. An extensive set of rovibrational energy levels has been calculated for the NH(2)(+) isotopologues described by this potential-energy surface. These rovibrational energy levels have been used to determine energy- and angular-momentum-resolved numbers of accessible product states from the NH(3)(+) isotopologue intermediates, which in turn have been averaged to give statistical branching fractions for all isotopically-substituted NH(+) + H(2) reactions. It is determined that in all cases where both hydrogen and deuterium are present, the NHD(+) product is preferred.     

Remote Electronic Tuning of Chiral N-Heterocyclic Carbenes

Our recent efforts to develop novel N-Heterocyclic carbene (NHC)-catalyzed asymmetric reactions are described. During our investigation for development of the acylation reactions via acylazoliums generated by the reactions of NHCs and α-oxidized aldehydes, we have observed significant effects of substitution at a remote site of the carbene carbon of NHCs. In addition, we also observed a significant enhancement of the enantioselectivity by the addition of carboxylate anions. From this observation, we proposed a novel working hypothesis involving a formation of a complex of the substrate and additive to reinforce the recognition of the catalyst for enhancement of the catalytic performance of the asymmetric N-heterocyclic carbene system. By applying this concept, we achieved the kinetic resolutions of both cyclic and acyclic alcohols in excellent enantioselectivities. The effects of the remote substitution were also observed in intramolecular Stetter reaction and intermolecular benzoin reaction. In these reactions, the comparison of the catalytic performance of the NHCs bearing variable remote substitutions provided insights into the reaction mechanism because the remote substitution tuned the electronic nature of NHCs without affecting the steric and electrostatic factors around the reaction site. We also developed an intramolecular benzoin condensation involving two aldehydes, which is challenging to realize. Using the substrates bearing proper protecting groups, we succeeded in the stereo divergent synthesis of a variety of inososes, which are important intermediates for the synthesis of biologically active cyclitols.     

Decomposition of CH2O by lanthanum: a theoretical study

This work aims to investigate the reaction mechanism of lanthanum atom with formaldehyde in the gas phase using density functional theory and coupled cluster calculations. The results indicate that the minimum energy pathway, similar to the reactions of its neighboring yttrium with formaldehyde, is the formation of the eta2-formaldehyde-metal complex followed by two C-H insertions which leads to metal dihydrides and carbon monoxide. The competing pathway producing a metal-carbonyl compound and hydrogen molecule favors a high-spin state and thus involves a spin conversion from doublet state to quartet state. The crossing region of the doublet and quartet potential energy surfaces (PES) has been estimated by a simple approach as proposed by Yoshizawa et al. Less favorable pathways leading to metal monoxide and carbene radical by C-O insertion as well as formyllanthanum by single C-H insertion are also studied. Compared with the CCSD(T) method, the BP86 method tends to overestimate the binding energies of the d-rich compounds, though the two methods qualitatively agree well on the reaction mechanism. Finally, the (n - 1)d1ns2 to (n - 1)d2ns1 promotion effect is proposed to account for the difference in the formation mechanism of the metal-carbonyl compounds LaCO and YCO, which may also extend to the reactions of formaldehyde with other "general" group III rare earth elements including Sc, Ce, Gd, and Lu.