Metabolomic Profiling of Antioxidant Compounds in Five Vachellia Species

The genus Vachellia, previously known as Acacia, belongs to the family Fabaceae, subfamily Leguminosae, which are flowering plants, commonly known as thorn trees. They are traditionally used medicinally in various countries including South Africa for the treatment of ailments such as fever, sore throat, Tuberculosis, convulsions and as sedatives. The aim of this study was to determine biochemical variations in five Vachellia species and correlate their metabolite profiles to antioxidant activity using a chemometric approach. The antioxidant activity of five Vachellia aqueous-methanolic extracts were analyzed using three methods: 2,2-di-phenyl-1-picrylhydrazyl (DPPH) radical scavenging assay, 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid (ABTS⁺) analysis and the ferric reducing antioxidant power (FRAP) assay by means of serial dilution and bioautography with the thin-layer chromatography (TLC) method. Amongst the Vachellia extracts tested, V. karroo, V. kosiensis and V. xanthophloea demonstrated the highest DPPH, ABTS⁺ and FRAP inhibitory activity. The antioxidant activities of DPPH were higher than those obtained by ABTS⁺, although these values varied among the Vachellia species. Proton nuclear magnetic resonance (¹H NMR), coupled with multivariate statistical modeling tools such as principal component analysis (PCA) and orthogonal partial least squares discriminant analysis (OPLS-DA), were performed to profile metabolites responsible for the observed activity. The OPLS-DA categorized the five Vachellia species, separating them into two groups, with V. karroo, V. kosiensis and V. xanthophloea demonstrating significantly higher radical scavenging activity than V. tortilis and V. sieberiana, which clustered together to form another group with lower radical scavenging activity. Annotation of metabolites was carried out using the ultra-high-performance liquid chromatography–quadrupole time-of-flight mass spectrometry (UHPLC-qTOF-MS), and it tentatively identified 23 metabolites of significance, including epigallocatechin (m/z = 305.0659), methyl gallate (m/z = 183.0294) and quercetin (m/z = 301.0358), amongst others. These results elucidated the metabolites that separated the Vachellia species from each other and demonstrated their possible free radical scavenging activities.     

1H NMR Combined with Multivariate Statistics for Discrimination of Female and Male Flower Buds of Populus tomentosa

¹H Nuclear Magnetic Resonance (¹H NMR) combined with multivariate statistics was adopted to discriminate female and male flower buds of Populus tomentosa in the study. Samples of 11 female and 16 male flower buds of P. tomentosa were collected in Beijing, China. ¹H NMR spectra were acquired on a 400 MHz spectrometer. In total, 30 chemical compounds were identified with standards and literature according to chemical shifts, peak areas, and multiplicity. Principal component analysis (PCA), hierarchical clustering analysis (HCA), and supervised orthogonal partial least squares-discriminant analysis (OPLS-DA) were applied to discriminate female and male flower buds. An apparent grouping trend (R²X, 0.809; Q², 0.903) between female and male groups was exhibited with PCA and HCA. The two groups were also well discriminated with OPLS-DA (R²X, 0.808; R²Y, 0.976; Q², 0.960). Combined with variable importance in projection (VIP) > 1.0 and p < 0.05 of OPLS-DA, it was found that the content of daucosterol, β-sitosterol, ursolic acid, and betulonic acid in male group was higher than that in female, which should be the key differences of chemical constituents in female and male flower buds of P. tomentosa. The study demonstrated that ¹H NMR combined with multivariate statistics could be used to discriminate female and male plants and clarify differences, which provided a novel method to identify the gender of dioecious plants.     

Sensitive monitoring of monoterpene metabolites in human urine using two-step derivatisation and positive chemical ionisation-tandem mass spectrometry

A gas chromatographic–positive chemical ionisation-tandem mass spectrometric (GC–PCI-MS/MS) method for the simultaneous determination of 10 oxidative metabolites of the monoterpenoid hydrocarbons α-pinene, (R)-limonene, and Δ³-carene ((+)-3-carene) in human urine was developed and tested for the monoterpene biomonitoring of the general population (n = 36). The method involves enzymatic cleavage of the glucuronides followed by solid-supported liquid–liquid extraction and derivatisation using a two-step reaction with N,O-bis(trimethylsilyl)-trifluoroacetamide and N-(trimethylsilyl)imidazole. The method proved to be both sensitive and reliable with detection limits ranging from 0.1 to 0.3 μg L⁻¹. In contrast to the frequent and distinct quantities of (1S,2S,4R)-limonene-1,2-diol, the (1R,2R,4R)-stereoisomer could not be detected. The expected metabolite of (+)-3-carene, 3-caren-10-ol was not detected in any of the samples. All other metabolites were detected in almost all urine samples.     

1H-NMR Metabolomics as a Tool for Winemaking Monitoring

The chemical composition of wine is known to be influenced by multiple factors including some viticulture practices and winemaking processes. ¹H-NMR metabolomics has been successfully applied to the study of wine authenticity. In the present study, ¹H-NMR metabolomics in combination with multivariate analysis was applied to investigate the effects of grape maturity and enzyme and fining treatments on Cabernet Sauvignon wines. A total of forty wine metabolites were quantified. Three different stages of maturity were studied (under-maturity, maturity and over-maturity). Enzyme treatments were carried out using two pectolytic enzymes (E1 and E2). Finally, two proteinaceous fining treatments were compared (vegetable protein, fining F1; pea protein and PVPP, fining F2). The results show a clear difference between the three stages of maturity, with an impact on different classes of metabolites including amino acids, organic acids, sugars, phenolic compounds, alcohols and esters. A clear separation between enzymes E1 and E2 was observed. Both fining agents had a significant effect on metabolite concentrations. The results demonstrate that ¹H-NMR metabolomics provides a fast and robust approach to study the effect of winemaking processes on wine metabolites. These results support the interest to pursue the development of ¹H-NMR metabolomics to investigate the effects of winemaking on wine quality.     

Rapid authentication of Gastrodiae rhizoma by direct ionization mass spectrometry

In this study, direct ionization mass spectrometry (DI-MS) for rapid authentication of Gastrodiae rhizoma (known as Tianma in Chinese), a popular herbal medicine, has been developed. This method is rapid, simple and allows direct generation of characteristic mass spectra from the raw herbal medicines with the application of some solvents and a high voltage. The acquired DI-MS spectra showed that gastrodin, parishin B/parishin C and parishin, the major active components of Gastrodiae rhizoma, could be found only in genuine Gastrodiae rhizoma samples, but not in counterfeit samples, thus allowing rapid authentication of Gastrodiae rhizoma. Moreover, wild and cultivated Gastrodiae rhizoma could be classified and Gastrodiae rhizoma from different geographical locations could be differentiated based on their different intensity ratios of characteristic ions or principal component analysis (PCA). This method is simple, rapid, reproducible, and can be extended to analyze other herbal medicines.     

A concise methodology for the synthesis of (−)-Δ-tetrahydrocannabinol and (−)-Δ-tetrahydrocannabivarin metabolites and their regiospecifically deuterated analogs

The availability of tetrahydrocannabinols (Δ⁹-THC), tetrahydrocannabivarins (Δ⁹-THCV), and their metabolites in both their undeuterated and deuterated forms is critical for the analysis of biological and toxicological samples. We report here a concise methodology for the syntheses of (−)-Δ⁹-THC and (−)-Δ⁹-THCV metabolites in significantly improved overall yields using commercially available starting materials. Our approach allowed us to obtain the key intermediates (6aR,10aR)-9-nor-9-oxo-hexahydrocannabinols in four steps from (+)-(1R)-nopinone. This was followed by an optimized Shapiro reaction to give the (−)-11-nor-9-carboxy-metabolites, which were converted to their respective (−)-11-hydroxy analogs. The synthetic sequence involves a minimum number of steps, avoids undesirable oxidative conditions, and incorporates the costly deuterated resorcinols near the end of the synthetic sequence. This methodology enabled us to synthesize eight regiospecifically deuterated (−)-Δ⁹-THC and (−)-Δ⁹-THCV metabolites in a preparative scale and high optical purity without deuterium scrambling or loss.     

Chemistry of xanthorrhizol: synthesis of several bisabolane sesquiterpenoids from xanthorrhizol

(−)-Xanthorrhizol (1) isolated from the rhizomes of Curcuma xanthorrhiza has been transformed to several bisabolane-type sesquiterpenoids, in a stereoselective manner. 10R- and 10S-10,11-dihydro-10,11-dihydroxyxanthorrhizols (2, 3), (−)-curcuquinone (4), (−)-curcuhydroquinone (5), helibisabonol A (7) and allylic alcohol 8 have been prepared from xanthorrhizol in optically active forms. All the routes involved a Sharpless AD to introduce the stereogenic centre at C-10.     

NMR structure determination of (11E)-trinervita-1(14),2,11-triene, a new diterpene from sexual glands of termites

Female alates of Nasutitermes ephratae termites from Guadeloupe and Nasutitermes sp. from Brazil produce a diterpene hydrocarbon of the molecular formula C₂₀H₃₀ as the main component of their tergal gland secretion. Analysis of NMR, IR, and mass spectra of the diterpene led to a structure of (11E)-trinervita-1(14),2,11-triene. Based on a comparison with the published oxygenated trinervitane skeleton from termites we prefer the enantiomer with absolute configurations (4R,7S,8R,15S,16S). The suggested structure is supported by ab initio quantum chemical calculation of ¹H and ¹³C chemical shifts for the optimized geometry of the molecule.     

Introduction of a phosphorus ylide moiety into [η-(ω-hydroxy)alkenyl]chromium(0) carbene complexes with Ph3PCCO and consecutive Wittig alkenations with 2-alkynals. Part 12: the chemistry of metallacyclic alkenylcarbene complexes

Ketenylidenetriphenylphosphorane, Ph₃PCCO (2), reacts selectively with the ω-hydroxy group of the alkene-carbene complexes (OC)₄CrC(η²-NMeCH₂CHCHCH₂OH)R¹ (1) (R¹=Me: (1a); Ph: (1b)) to give the acyl ylide terminated complexes (OC)₄CrC[(4,5-η²)-NMeCH₂CHCHCH₂O(O)C-CHPPh₃]R¹ (3) (R¹=Me: (3a); Ph: (3b)). Complexes 3 undergo Wittig alkenation reactions with aldehydes such as 2-alkynals, R²-CC-CHO (R²=H, SiMe₃, Ph), to give the corresponding 4Z, 9E-dien-11-ynes (OC)₄CrC[(4,5-η²)-NMeCH₂CHCHCH₂O(O)C-CHCH-CC-R²]R¹ (4-6) (R¹=Me, R²=H, SiMe₃, Ph: (4a-6a); R¹=Ph, R²=H, SiMe₃, Ph: (4b-6b)). All complexes were characterized in solution by one- and two-dimensional NMR spectroscopy (¹H, ¹³C, ²⁹Si, ³¹P, ¹H/¹H COSY, ¹³C/¹H HETCOR, ³¹P/³¹P EXSY).     

Configurational analysis of the natural product passifloricin A by quantum mechanical C NMR GIAO chemical shift calculations

Quantum chemical calculations at mPW1PW91 level, with full geometry optimization, using the 6-31g(d) basis set, and GIAO (gauge including atomic orbitals) ¹³C NMR chemical shifts using the 6-31g(d,p) basis set, are here utilized as a support to define the configurational features of the natural product passifloricin A, whose previously proposed relative configuration has been recently shown, by synthetic studies, to be incorrect. This study suggests that the relative stereostructure for passifloricin A corresponds to the δ-lactone of the (5R,7R,9S,11R)-tetrahydroxyhexacos-2-enoic acid.     

IRMS detection of testosterone manipulated with C labeled standards in human urine by removing the labeled C

Isotope ratio mass spectrometry (IRMS) is applied to confirm testosterone (T) abuse by determining the carbon isotope ratios (δ¹³C value). However, ¹³C labeled standards can be used to control the δ¹³C value and produce manipulated T which cannot be detected by the current method. A method was explored to remove the ¹³C labeled atom at C-3 from the molecule of androsterone (Andro), the metabolite of T in urine, to produce the resultant (A-nor-5α-androstane-2,17-dione, ANAD). The difference in δ¹³C values between Andro and ANAD (Δδ¹³C_Andro–ANAD, ‰) would change significantly in case manipulated T is abused. Twenty-one volunteers administered T manipulated with different ¹³C labeled standards. The collected urine samples were analyzed with the established method, and the maximum value of Δδ¹³C_Andro–ANAD post ingestion ranged from 3.0‰ to 8.8‰. Based on the population reference, the cut-off value of Δδ¹³C_Andro–ANAD for positive result was suggested as 1.2‰. The developed method could be used to detect T manipulated with 3-¹³C labeled standards.     

Preparation of the novel fluorine-18-labeled VIP analog for PET imaging studies using two different synthesis methods

Vasoactive intestinal peptide (VIP) receptors are expressed on various tumor cells in much higher density than somatostatin receptors, which provides the basis for radiolabeling VIP as tumor diagnostic agent. However, fast proteolytic degradation of VIP in vivo limits its clinical application. With the aim to develop and evaluate new ligands for depicting the VIP receptors with positron emission tomography (PET), the structure modified [R^8,15,21, L¹⁷]-VIP analog was radiolabeled with ¹⁸F using two different methods. With the first method, N-4-[¹⁸F]fluorobenzoyl-[R^8,15,21, L¹⁷]-VIP ([¹⁸F]FB-[R^8,15,21, L¹⁷]-VIP 7) was produced in a decay-corrected radiochemical yield (RCY) of 33.6 ± 3%, a specific radioactivity of 255 GBq/μmol (n = 5) within 100 min in four steps. Similarly, N-4-[¹⁸F](fluoromethyl)-benzoyl-[R^8,15,21, L¹⁷]-VIP ([¹⁸F]FMB-[R^8,15,21, L¹⁷]-VIP 8) was synthesized in a RCY of 34.85 ± 5%, a specific radioactivity of 180 GBq/μmol (n = 5) within 60 min in only one step. The two products 7 and 8 were both shown good stability in HSA. Moreover, the low bone uptakes of 7 and 8 in vivo of mice showed good defluorination stability.     

Correlation between the synthetic origin of methamphetamine samples and their 15N and 13C stable isotope ratios

The active ingredient of ecstasy, N-methyl-3,4-methyldioxyphenylisopropylamine (MDMA) can be manufactured by a number of easy routes from simple precursors. We have synthesised 45 samples of MDMA following the five most common routes using N-precursors from 12 different origins and three different precursors for the aromatic moiety. The ¹³C and ¹⁵N contents of both the precursors and the MDMA samples derived therefrom were measured by isotope ratio mass spectrometry coupled to an elemental analyser (EA-IRMS). We show that within-pathway correlation between the ¹⁵N content of the precursor and that of the derived MDMA can be strong but that no general pattern of correlation can be defined. Rather, it is evident that the δ¹⁵N values of MDMA are strongly influenced by a combination of the δ¹⁵N values of the source of nitrogen used, the route by which the MDMA is synthesised, and the experimental conditions employed. Multivariate analysis (PCA) based on the δ¹⁵N values of the synthetic MDMA and of the δ¹⁵N and δ¹³C values of the N-precursors leads to good discrimination between the majority of the reaction conditions tested.     

Stereospecific Synthesis of (−)-β-Turmerone and (−)-Bisacurol

The structure of (+)-β-turmerone ((+)- 1a ), a constituent of the rhizomes of Curcuma longa Linn. , and Curcuma xanthorriza, is established as (1′R,6S)-2-methyl-6-(4′-methylenecyclohex-2′-en-1′-yl)hept-2-en-4-one by synthesis of its enantiomer (−)- 1a , and of the corresponding (1′S,6S)-diastereoisomer (+)- 1b as well. In a stereospecific seventeen-step procedure, the monoterpene diols 2a and 2b of well-established configuration are converted into the target compounds (−)- 1a and (+)- 1b , respectively. Moreover, (−)-bisacurol (−)- 3a (II), the enantiomer of another bisabolane sesquiterpene derived from Curcuma xanthorriza, is obtained as a single stereoisomer and shown to be (1′S,6R)-2-methyl-6-(4′-methylenecyclohex-2′-en-1′-yl)hept-2-en-4-ol, the relative configuration at the remaining OH-substituted chiral center C(4) still being unknown.     

Feasibility of near-infrared spectroscopy and chemometrics analysis for discrimination of Cymbopogon nardus from Cymbopogon citratus

The authenticity of essential oils has become an important issue in supplying essential oil raw materials for the pharmaceutical, perfume, and cosmetic industries. Citronella oil is one of the essential oils used in those industries. Cymbopogon nardus is one of the lemongrass species that can produce citronella oil. However, with the high price of citronella oil from C. nardus, there is a possibility of being substituted or adulterated with closely related plants, namely Cymbopogon citratus. This paper described the feasibility of near-infrared (NIR) spectroscopy combined with chemometrics analysis for rapid identification and authentication of C. nardus from C. citratus essential oil. NIR spectra of both essential oils and their mixture (10 % and 25 % v/v of C. citratus in C. nardus) showed a similar spectral profile, so we cannot easily discriminate them and need help from chemometrics analysis. For chemometrics analysis, we used absorbance data from the preprocessed NIR spectra at wavenumbers 4000–6500 cm^?1. Using PCA, we could separate each essential oil from C. nardus and C. citratus but cannot discriminate between 10 % and 25 % of CC in CN. While using OPLS-DA with R2X(cum) = 0.88, R2Y(cum) = 0.859 and Q2(cum) = 0.723, we could group each sample. The OPLS-DA score plot clearly shows the difference between C. nardus and C. citratus essential oils and their mixtures. The combination of NIR and OPLS-DA could provide a suitable method for identifying and authenticating C. nardus from C. citratus essential oil.     

Fourier transform near- and mid-infrared spectroscopy can distinguish between the commercially important Pelargonium sidoides and its close taxonomic ally P. reniforme

Pelargonium sidoides is indigenous to South Africa and abundant in the Eastern Cape Province. Several herbal products have been formulated using P. sidoides of which Umckaloabo^® is probably the most popular and successfully marketed in Germany. The objective of this study was to discriminate between P. sidoides and Pelargonium reniforme by FT-IR spectroscopy. Absorbance spectra were collected for P. sidoides (n = 96) and its close taxonomic ally P. reniforme (n = 57) in the near infrared (NIR) and mid infrared (MIR) regions. The spectroscopic data were analysed using chemometric computations including principal component analysis and orthogonal projections to latent structures discriminant analysis. Phytochemical variation of 5.79% in the NIR dataset (R²X(cum) = 0.962; Q²(cum) = 0.918) and 9.22% variation in the MIR dataset (R²X(cum) = 0.497; Q²(cum) = 0.658) was responsible for the separation of the two species. Seven absorption areas were identified as putative biomarkers responsible for the differences between the two species. These results indicate that FT-NIR and FT-MIR spectroscopy can be used to discriminate between these two closely related species which occupy a sympatric distribution in South Africa.     

Characterization of (16R) and (16S)-hydroxyroquefortine C; diastereomeric metabolites from Penicillium crustosum DAOM 215343

Two diastereomeric metabolites (16R) and (16S)-hydroxyroquefortine C were characterized from Penicillium crustosum DAOM 215343. The 16S metabolite is reported for the first time along with evidence for the absolute stereochemistry of both. The metabolites were originally detected by LC-NMR and the structures of the subsequently isolated metabolites were elucidated by HRMS and NMR.     

Electron density distributions in substituted 2,3,4,5-tetraphenyl-1-germacyclopenta-2,4-dienes studied by NMR spectroscopy

The signals in the¹³C NMR spectra of 2,3,4,5-tetraphenyl-1-germacyclopenta-2,4-dienes (R¹=R²=H, Me,cyclo-C₃H₅, SiMe₃, SnMe₃, R¹=Me, R²=H, Cl) were completely assigned using 2D NMR spectroscopy. The pattern of the variation of the chemical shifts in the¹³C NMR spectra indicates that the effects of substituents R¹ and R² on the heterocycle and on the phenyl groups are of inductive rather than mesomeric origin and include the direct through-space polarization of bonds (field effect). Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 1962–1965, November, 1997.     

GC-MS-based urine metabolic profiling of autism spectrum disorders

Autism spectrum disorders (ASD) are a group of neurodevelopmental disorders resulting from multiple factors. Diagnosis is based on behavioural and developmental signs detected before 3 years of age, and there is no reliable biological marker. The purpose of this study was to evaluate the value of gas chromatography combined with mass spectroscopy (GC-MS) associated with multivariate statistical modeling to capture the global biochemical signature of autistic individuals. GC-MS urinary metabolic profiles of 26 autistic and 24 healthy children were obtained by liq/liq extraction, and were or were not subjected to an oximation step, and then were subjected to a persilylation step. These metabolic profiles were then processed by multivariate analysis, in particular orthogonal partial least-squares discriminant analysis (OPLS-DA, R ²Y(cum) = 0.97, Q ²(cum) = 0.88). Discriminating metabolites were identified. The relative concentrations of the succinate and glycolate were higher for autistic than healthy children, whereas those of hippurate, 3-hydroxyphenylacetate, vanillylhydracrylate, 3-hydroxyhippurate, 4-hydroxyphenyl-2-hydroxyacetate, 1H-indole-3-acetate, phosphate, palmitate, stearate, and 3-methyladipate were lower. Eight other metabolites, which were not identified but characterized by a retention time plus a quantifier and its qualifier ion masses, were found to differ between the two groups. Comparison of statistical models leads to the conclusion that the combination of data obtained from both derivatization techniques leads to the model best discriminating between autistic and healthy groups of children.