轮烷研究－从超分子组装到分子器件

轮烷是一类由两端带有大的基团的线性分子和有机环化合物组成的互相锁连的分子化合物。主要综述了近年来这类超分子化合物的合成方法进展、在合成中的应用及其作为分子器件方面的研究进展。     

Molecular Recognition: Preparation of Polyrotaxan and Tubular Polymer from Cyclodextrin

We found that many α-CDs are threaded on a poly(ethylene glycol) (PEG) chain to form a crystalline complex in high yields, although β-CD did not form complexes with PEG. It was made clear that the relationship between the chain cross-sectional areas of the polymers and the diameters of the cavities of cyclodextrins is very important in the complex formation of polymers and cyclodextrins. Polyrotaxanes were prepared by the reaction of PEG–bisamine (PEGBA), which is PEG with amino groups in both ends, with 2,4-dinitro-1-fluorobenzene. In addition, the molecular tubes, a new family of novel nanostructures, were prepared and characterized. These findings indicate that such template synthesis provides a new approach to construct new nanostrutures, which may have implications for molecular technologies and materials science. © 1997 John Wiley & Sons, Ltd.     

Weinreb Amide,Ketone and Amine as Potential and Competitive Secondary Molecular Stations for Dibenzo-[24]Crown-8 in [2]Rotaxane Molecular Shuttles

This paper reports the synthesis and study of new pH-sensitive DB24C8-based [2]rotaxane molecular shuttles that contain within their axle four potential sites of interaction for the DB24C8: ammonium, amine, Weinreb amide, and ketone. In the protonated state, the DB24C8 lay around the best ammonium site. After either deprotonation or deprotonation-then-carbamoylation of the ammonium, different localizations of the DB24C8 were seen, depending on both the number and nature of the secondary stations and steric restriction. Unexpectedly, the results indicated that the Weinreb amide was not a proper secondary molecular station for the DB24C8. Nevertheless, through its methoxy side chain, it slowed down the shuttling of the macrocycle along the threaded axle, thereby partitioning the [2]rotaxane into two translational isomers on the NMR timescale. The ketone was successfully used as a secondary molecular station, and its weak affinity for the DB24C8 was similar to that of a secondary amine.     

Synthesis and characterization of a persistent paramagnetic rotaxane based on alpha-cyclodextrin

The synthesis and spectroscopic properties of a novel paramagnetic [2]rotaxane is described. This rotaxane is made from molecules having an alkyl chain flanked by 2,2,6,6-tetramethylpiperidine-N-oxyl (TEMPO) groups. Complexation of sebacoyl chloride by alpha-cyclodextrin followed by reaction with a bulky aminonitroxide resulted in the trapping of the cyclodextrin, threaded by the alkyl chain, thus generating the rotaxane structure. The structure of the paramagnetic [2]rotaxane was fully characterized by ESI-MS, 1D and 2D NMR and ESR spectroscopy.     

A macrocycle/molecular-clip complex that functions as a quadruply controllable molecular switch

Herein, we report the synthesis of a molecular clip with TTF side-walls and its binding behavior towards electron-deficient guests, namely the formation of macrocycle/molecular-clip supramolecular complexes in solution. Four different sets of external stimuli--the K(+)/[2.2.2]cryptand, NH(4) (+)/Et(3)N and (p-BrPh)(3)NSbCl(6)/Zn pairs, and heating/cooling cycles-control the movement of this molecular switch between its threaded and unthreaded states and provide color changes that are observable by the naked eye. This macrocycle/molecular-clip complex system can be considered not only as a quadruple-use molecular switch, but can also be operated by three of these stimuli as a three-input molecular NOR-functioning logic gate that may be monitored by UV-visible spectroscopy.     

Rotaxane‐Like Structures Threaded through the Pores of Hollow Porous Nanocapusles

Nanocapsules with molecules threaded through the porous shells may lead to advanced cell‐mimicking functional devices. Herein, we show the feasibility of synthesizing such hybrid nanostructures by using vesicle‐templated polymer nanocapsules with controlled nanopores. Ship‐in‐a‐bottle assembly inside a nanocapsule created an internal unit. An external unit was then connected to an entrapped internal unit through pre‐attached linker threaded through a nanopore in the shell of the nanocapsule. Both internal and external units are larger than the pore size and cannot cross the shell, producing a rotaxane‐like structure. Successful synthesis was achieved with fairly short linkers (six and ten carbon atoms in a chain), creating an opportunity for facile synthesis of functional devices capable of cross‐shell communication.     

Use of Cleavable Coordinating Rings as Protective Groups in the Synthesis of a Rotaxane with an Axis that Incorporates More Chelating Groups Than Threaded Macrocycles

A new methodology allowing preparation of a linear “unsaturated” [3]rotaxane consisting of an axis incorporating more coordination sites than threaded rings was developed. It was based on the preliminary synthesis of a “saturated” [5]rotaxane consisting of a four‐chelating site axis threaded through four macrocyclic components, two of them being cleavable rings incorporating a lactone function and the two others being “secure” non‐cleavable rings. The stoppering reaction was based on click chemistry. Subsequently, cleavage and removal of the two lactone‐containing macrocycles from the [5]rotaxane in basic medium afforded the desired “unsaturated” [3]rotaxane in quantitative yield.     

Artificial polymerases and molecular chaperones

Cyclodextrins (CDs) were found to initiate polymerization of lactone to give polyesters with a CD ring at the end of the polymer chain in high yields only by mixing and heating with monomer without cocatalysts or solvents. CD‐tethered polyester propagates with the formation of poly‐pseudorotaxane, which is necessary to initiate further polymerization. CDs threaded onto the polymer chain are also essential for maintaining the propagating state of the polyester. By polymerizing with CD, switching the activity of the polymerization by photoisomerization was demonstrated. This polymerization system showed specific substrate recognition, releasing the products from the active site. By using the above polymerization system, β‐CD nanospheres which initiates the oligomerization of lactone were constructed. It was found that the formation of poly‐pseudorotaxane on the nanosphere enabled further polymerization activity for lactone. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 4469–4481, 2009     

SYNTHESIS AND CHARACTERIZATION OF POLYROTAXANES MADE FROM α-CDs THREADED ONTO TRIBLOCK COPOLYMERS WITH PEG AS A CENTRAL AXLE AND FLANKED BY TWO LOW MOLECULAR WEIGHT POLYSTYRENES AS OUTER STOPPERS

A study has been conducted on the synthesis and characterization of a kind of novel polyrotaxanes comprising α cyclodextrins (α-CDs) threaded on triblock copolymers with poly(ethylene glycol) (PEG) as a central axle and flanked by two low molecular weight polystyrenes as outer stoppers.Styrene was allowed to telomerize with polypseudorotaxanes as chain transfer agents made from the self-assembly of a distal thiol-capped PEG with a varying amount of α-CDs in the presence of a redox initiation system at 40℃ in aqueous solutions.The resulting polyrotaxanes were characterized in detail by 1H-NMR,FTIR,XRD,TG and DSC analyses.The findings from the study demonstrated that the low molecular weight polystyrenes were successfully attached to two axle terminals of polypseudorotaxanes,and the number of α-CDs threaded onto the PEG backbone was tunable by varying its molar feeding ratio to some extent,while the polymerization degree of PS nearly remained constant in this radical telomerization process.     

Assembly of a fluorescent cyclodextrin polyrotaxane and its detection by fluorescence microscopy

A straightforward method for the assembly of fluorescent polyrotaxanes is described here. The consecutive threading of N‐(6^I‐desoxy‐β‐cyclodextrin‐6^I‐yl)‐N′‐(5‐fluoresceinyl)‐thiourea, β‐CD‐F , and α‐CD onto poly(N,N‐dimethyliminium‐hexamethylen‐N′,N′‐dimethyliminium‐decamethylene chloride), I‐6,10 , leads to a fluorescent polyrotaxane. Free β‐CD‐F could be distinguished from threaded β ‐ CD‐F by gel electrophoresis. Since the dissociation of threaded α‐CD rings is sterically hindered, the obtained polyrotaxanes are kinetically stable at 25 °C, and they did not require further stabilization by the attachment of stopper groups at the chain ends. Single polyrotaxane entities could be visualized with both fluorescence microscopy and atomic force microscopy. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 6223–6230, 2009     

An artificial molecular chaperone: poly-pseudo-rotaxane with an extensible axle

Poly-pseudo-rotaxanes CDs contains as a subset 1 (CDs; cyclodextrins, 1; poly(delta-valerolactone) having single beta-CD at the end of the polymer chain) initiate polymerization of delta-valerolactone (delta-VL) in the solid state when CDs (alpha-CD, beta-CD, and 2,6-di-O-methyl-beta-CD) are threaded onto the polymer chain. 1 without threaded CDs did not show any polymerization ability for delta-VL. An adamantane molecule (Ad) inhibited the polymerization ability of CDs contains as a subset 1 for delta-VL, indicating that beta-CD at the end of CDs contains as a subset 1 could not bind delta-VL because the beta-CD cavity was occupied by Ad. It should be noted that the insertion reaction and the polymerization took place inside the beta-CD cavity at the end of CDs contains as a subset 1 and that the formation of poly-pseudo-rotaxane is necessary for the initiation of delta-VL. The structures of beta-CD contains as a subset 1 and 1 were characterized by powder X-ray diffraction measurements and solid-state NMR spectroscopies. The polymer chain of beta-CD contains as a subset 1 was found to elongate in the solid state, whereas the polymer chain of 1 formed a random coil conformation. 1 was deactivated for the polymerization by blocking the active cavity of beta-CD with the polymer chain. CDs threaded onto 1 are immune to the initiation of delta-VL directly but have an essential role to fold the polymer chain in a proper way as an artificial chaperone.     

Homo- and hetero-[3]rotaxanes with two pi-systems clasped in a single macrocycle

Here we present the first synthesis of a [3]rotaxane with two dumbbell components threaded through a single gamma-cyclodextrin macrocycle. This synthesis is carried out in two steps: first one dumbbell is synthesized threaded through the macrocycle to give a [2]rotaxane, then a second dumbbell is synthesized through the remaining cavity of the [2]rotaxane. We have synthesized a hetero- [3]rotaxane with one stilbene and one cyanine dye threaded through gamma-cyclodextrin, which exhibits quantitative energy transfer between the two encapsulated dyes. The stilbene [2]rotaxane intermediate in this synthesis has a remarkably high affinity for suitably shaped hydrophobic guests in aqueous solution, facilitating the synthesis of [3]rotaxanes and suggesting possible applications in sensors.     

SYNTHESIS AND CHARACTERIZATION OF POLYROTAXANES MADE FROM α-CDs THREADED ONTO TRIBLOCK COPOLYMERS WITH PEG AS A CENTRAL AXLE AND FLANKED BY TWO LOW MOLECULAR WEIGHT POLYSTYRENES AS OUTER STOPPERS

A study has been conducted on the synthesis and characterization of a kind of novel polyrotaxanes comprisingα- cyclodextrins (α-CDs) threaded on triblock eopolymers with poly(ethylene glycol) (PEG) as a central axle and flanked by two low molecular weight polystyrenes as outer stoppers.Styrene was allowed to telomerize with polypseudorotaxanes as chain transfer agents made from the self-assembly of a distal thiol-capped PEG with a varying amount ofα-CDs in the presence of a redox initiation system at 40~C in aqueous solutions.The resulting polyrotaxanes were characterized in detail by ~1H-NMR,FTIR,XRD,TG and DSC analyses.The findings from the study demonstrated that the low molecular weight polystyrenes were successfully attached to two axle terminals of polypseudorotaxanes,and the number ofα-CDs threaded onto the PEG backbone was tunable by varying its molar feeding ratio to some extent,while the polymerization degree of PS nearly remained constant in this radical telomerization process.     

Logic Gating by Macrocycle Displacement Using a Double‐Stranded DNA [3]Rotaxane Shuttle

Molecular interlocked systems with mechanically trapped components can serve as versatile building blocks for dynamic nanostructures. Here we report the synthesis of unprecedented double‐stranded (ds) DNA [2]‐ and [3]rotaxanes with two distinct stations for the hybridization of the macrocycles on the axle. In the [3]rotaxane, the release and migration of the “shuttle ring” mobilizes a second macrocycle in a highly controlled fashion. Different oligodeoxynucleotides (ODNs) employed as inputs induce structural changes in the system that can be detected as diverse logically gated output signals. We also designed nonsymmetrical [2]rotaxanes which allow unambiguous localization of the position of the macrocycle by use of atomic force microscopy (AFM). Either light irradiation or the use of fuel ODNs can drive the threaded macrocycle to the desired station in these shuttle systems. The DNA nanostructures introduced here constitute promising prototypes for logically gated cargo delivery and release shuttles.     

A mechanically interlocked bundle

The prototype of an artificial molecular machine consisting of a trisammonium tricationic component interlocked with a tris(crown ether) component to form a molecular bundle with averaged C(3v) symmetry has been designed and synthesized. The system is based on noncovalent interactions, which include 1) N(+)-H...O hydrogen bonds; 2) C-H...O interactions between the CH(2)NH(2) (+)CH(2) protons on three dibenzylammonium-ion-containing arms, which are attached symmetrically to a benzenoid core, and three dibenzo[24]crown-8 macrorings fused onto a triphenylene core; and 3) pi...pi stacking interactions between the aromatic cores. The template-directed synthesis of the mechanically interlocked, triply threaded bundle involves post-assembly covalent modification, that is, the efficient conversion of three azide functions at the ends of the arms of the bound and threaded trication into bulky triazole stoppers, after 1,3-dipolar cycloaddition with di-tert-butylacetylenedicarboxylate to the extremely strong 1:1 adduct that is formed in dichloromethane/acetonitrile (3:2), on account of a cluster effect associated with the paucivalent adduct. Evidence for the averaged C(3v) symmetry of the molecular bundle comes from absorption and luminescence data, as well as from electrochemical experiments, (1)H NMR spectroscopy, and mass spectrometry. The photophysical properties of the mechanically interlocked bundle are very similar to those of the superbundle that precedes the formation of the bundle in the process of supramolecular assistance to covalent synthesis. Although weak non-nucleophilic bases (e.g., nBu(3)N and iPr(2)NEt) fail to deprotonate the bundle, the strong tBuOK does, as indicated by both luminescence and (1)H NMR spectroscopy. While deprotonation undoubtedly loosens up the interlocked structure of the molecular bundle by replacing relatively strong N(+)-H...O hydrogen bonds by much weaker N-H...O ones, the pi...pi stacking interactions ensure that any structural changes are inconsequential, particularly when the temperature of the solution of the neutral molecular bundle in dichloromethane is cooled down to considerably below room temperature.     

Cucurbit[8]uril rotaxanes

The synthesis of [2]rotaxanes, each comprising a viologen core threaded through a cucurbit[8]uril (Q8, Figure 1) macrocycle and stoppered by tetraphenylmethane groups, and their binding to second guests as inclusion complexes in organic and aqueous media are described. Stoppering was observed to have little effect on binding. Chemical modification of the threaded guest was used to control solubility and binding characteristics, thus demonstrating a novel approach to making artificial receptors with readily modifiable properties.     

Supramolecular assemblies through macromolecular recognition by cyclodextrins

Cyclodextrins have been found to form inclusion complexes with various polymers with high specificities to give stoichiometric compounds in crystalline states. Polyrotaxanes in which many cyclodextrins are threaded on a single chain were prepared by capping the chain ends with bulky groups.     

Systematic Dissection of an Aminopyrrolic Cage Receptor for β‐Glucopyranosides Reveals the Essentials for Effective Recognition

A set of structures designed for the recognition of glucosides has been obtained by systematically destructuring a tripodal aminopyrrolic cage receptor that selectively recognizes octyl‐β‐D ‐glucopyranoside (OctβGlc). NMR spectroscopy and isothermal titration calorimetry binding measurements showed that cleavage of one pillar of the cage was beneficial to the binding properties of the receptor, as long as two residual amino groups of the cleaved pillar were present. Removal of these two residual amino groups produced a dramatic loss of affinity for OctβGlc of the resulting monocyclic analogue of the parent cage receptor. A significant improvement in the binding ability was achieved by replacing one pillar with two aminopyrrolic hydrogen‐bonding arms, despite the loss of a preorganized structure. In contrast to the cage receptor, recognition of OctβGlc was observed, even in a competitive medium (30 % DMF in chloroform). Structural studies in solution, carried out through NMR spectroscopy and molecular modeling calculations, led to the elucidation of the 3D binding modes of the side‐armed monocyclic receptors; this highlighted the key role of the amino groups and demonstrated the occurrence of a rotaxane‐like complex, which featured the octyl chain of the glucoside threaded through the macrocyclic ring.     

Divergent Synthesis of Molecular Winch Prototypes

We report the synthesis of conceptually new prototypes of molecular winches with the ultimate aim to investigate the work performed by a single ruthenium-based molecular motor anchored on a surface by probing its ability to pull a load upon electrically-driven directional rotation. According to a technomimetic design, the motor was embedded in a winch structure, with a long flexible polyethylene glycol chain terminated by an azide hook to connect a variety of molecular loads. The structure of the motor was first derivatized by means of two sequential cross-coupling reactions involving a penta(4-halogenophenyl)cyclopentadienyl hydrotris(indazolyl)borate ruthenium(II) precursor and the resulting benzylamine derivative was next exploited as key intermediate in the divergent synthesis of a family of nanowinch prototypes. A one-pot method involving sequential peptide coupling and Cu-catalyzed azide-alkyne cycloaddition was developed to yield four loaded nanowinches, with load fragments encompassing triptycene, fullerene and porphyrin moieties.