Colorimetric and electrochemical Pb~(2+) detection by imine-bridged tetrathiafulvalene-pyridine derivatives

Imine-bridged TTF-π-pyridine derivatives, 2NTTF, 3NTTF and 4NTTF, were synthesized and the cation-binding study was performed. It is noted that with the addition of the micromolar concentration of Pb2+ to the solution, these compounds display remarkable changes in solution color, 1H NMR spectra and electrochemical properties. The nitrogen atom of the imine-bridge in 2NTTF not only serves as a π-conjugated spacer but also participates in the sensing and coordinating properties.     

Highly sensitive naked-eye and fluorescence "turn-on" detection of Cu(2+) using Fenton reaction assisted signal amplification

Increase of pH induced by Cu(2+)-catalyzed Fenton reaction promoted ring-opening of triazole-linked fluorescein lactone, which enabled selective "turn-on" fluorescent detection of Cu(2+), along with ultralow naked-eye detection limit down to 200 nM.     

Detection of Metal Ions (Cu2+, Hg2+) and Cocaine by Using Ligation DNAzyme Machinery

The Cu²⁺‐dependent ligation DNAzyme is implemented as a biocatalyst for the colorimetric or chemiluminescence detection of Cu²⁺ ions, Hg²⁺ ions, or cocaine. These sensing platforms are based on the structural tailoring of the sequence of the Cu²⁺‐dependent ligation DNAzyme for specific analytes. The tethering of a subunit of the hemin/G‐quadruplex DNAzyme to the ligation DNAzyme sequence, and the incorporation of an imidazole‐functionalized nucleic‐acid sequence, which acts as a co‐substrate for the ligation DNAzyme that is tethered to the complementary hemin/G‐quadruplex subunit. In the presence of different analytes, Cu²⁺ ions, Hg²⁺ ions, or cocaine, the pretailored Cu²⁺‐dependent ligation DNAzyme sequence stimulates the respective ligation process by combining the imidazole‐functionalized co‐substrate with the ligation DNAzyme sequence. These reactions lead to the self‐assembly of stable hemin/G‐quadruplex DNAzyme nanostructures that enable the colorimetric analysis of the substrate through the DNAzyme‐catalyzed oxidation of 2,2′‐azinobis(3‐ethylbenzothiazoline‐6‐sulfonic acid), ABTS^2?, by H₂O₂ into the colored product ABTS^.?, or the chemiluminescence detection of the substrate through the DNAzyme‐catalyzed oxidation of luminol by H₂O₂. The detection limits for the sensing of Cu²⁺ ions, Hg²⁺ ions, and cocaine correspond to 1 nM , 10 nM and 2.5 μM , respectively. These different sensing platforms also reveal impressive selectivities.     

Pb(2+)-introduced activation of horseradish peroxidase (HRP)-mimicking DNAzyme

A novel nucleic acid hairpin structure composed of Pb(2+)-dependent DNAzyme and HRP-mimicking DNAzyme was developed. This hairpin structure can be used as a sensor for the detection of Pb(2+) based on colorimetry.     

Electronic spectrum of UO2(2+) and [UO2Cl4]2- calculated with time-dependent density functional theory

The electronic spectra of UO(2) (2+) and [UO(2)Cl(4)](2-) are calculated with a recently proposed relativistic time-dependent density functional theory method based on the two-component zeroth-order regular approximation for the inclusion of spin-orbit coupling and a noncollinear exchange-correlation functional. All excitations out of the bonding sigma(u) (+) orbital into the nonbonding delta(u) or phi(u) orbitals for UO(2) (2+) and the corresponding excitations for [UO(2)Cl(4)](2-) are considered. Scalar relativistic vertical excitation energies are compared to values from previous calculations with the CASPT2 method. Two-component adiabatic excitation energies, U-O equilibrium distances, and symmetric stretching frequencies are compared to CASPT2 and combined configuration-interaction and spin-orbit coupling results, as well as to experimental data. The composition of the excited states in terms of the spin-orbit free states is analyzed. The results point to a significant effect of the chlorine ligands on the electronic spectrum, thereby confirming the CASPT2 results: The excitation energies are shifted and a different luminescent state is found.     

Colorimetric detection of genetically modified organisms based on exonuclease III-assisted target recycling and hemin/G-quadruplex DNAzyme amplification

An isothermal colorimetric method is described for amplified detection of the CaMV 35S promoter sequence in genetically modified organism (GMO). It is based on (a) target DNA-triggered unlabeled molecular beacon (UMB) termini binding, and (b) exonuclease III (Exo III)-assisted target recycling, and (c) hemin/G-quadruplex (DNAzyme) based signal amplification. The specific binding of target to the G-quadruplex sequence-locked UMB triggers the digestion of Exo III. This, in turn, releases an active G-quadruplex segment and target DNA for successive hybridization and cleavage. The Exo III impellent recycling of targets produces numerous G-quadruplex sequences. These further associate with hemin to form DNAzymes and hence will catalyze H₂O₂-mediated oxidation of the chromogenic enzyme substrate ABTS^2? causing the formation of a green colored product. This finding enables a sensitive colorimetric determination of GMO DNA (at an analytical wavelength of 420 nm) at concentrations as low as 0.23 nM. By taking advantage of isothermal incubation, this method does not require sophisticated equipment or complicated syntheses. Analyses can be performed within 90 min. The method also discriminates single base mismatches. In our perception, it has a wide scope in that it may be applied to the detection of many other GMOs.

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Graphical abstract An isothermal and sensitive colorimetric method is described for amplified detection of CaMV 35S promoter sequence in genetically modified organism (GMO). It is based on target DNA-triggered molecular beacon (UMB) termini-binding and exonuclease III assisted target recycling, and on hemin/G-quadruplex (DNAzyme) signal amplification.

     

Selective preconcentration of thorium in the presence of UO(2)(2+), Ce(3+) and La(3+) using Th(IV)-imprinted polymer

We have prepared Th(IV) ion-imprinted polymers, which can be used for the selective preconcentration of Th(IV) ions, represented by uranium and lanthanides. N-methacryloyl-(l)-glutamic acid (MAGA) was chosen as the complexing monomer. In the first step, Th(IV) was complexed with MAGA and the Th(IV)-imprinted poly[ethylene glycol dimethacrylate-N-methacryloyl-(l)-glutamic acid] (Poly(MAGA-EDMA)) beads were synthesized by suspension polymerization. After that, the template Th(IV) ions were removed using 8.0 M HNO₃ solution. The breakthrough capacity was 40.44 mg Th(IV)/g beads. The relative selectivity coefficients of imprinted beads were 68, 97 and 116 for UO₂²⁺, La³⁺ and Ce³⁺, times greater than non-imprinted matrix, respectively. The Th(IV)-imprinted beads could be used many times without decreasing their breakthrough capacities significantly.     

Amplified fluorescence detection of mercury(II) ions (Hg2+) using target-induced DNAzyme cascade with catalytic and molecular beacons

In this work, a fluorescent sensing strategy was developed for the detection of mercury(II) ions (Hg(2+)) in aqueous solution with excellent sensitivity and selectivity using a target-induced DNAzyme cascade with catalytic and molecular beacons (CAMB). In order to construct the biosensor, a Mg(2+)-dependent DNAzyme was elaborately designed and artificially split into two separate oligonucleotide fragments. In the presence of Hg(2+), the specific thymine-Hg(2+)-thymine (T-Hg(2+)-T) interaction induced the two fragments to produce the activated Mg(2+)-dependent DNAzyme, which would hybridize with a hairpin-structured MB substrate to form the CAMB system. Eventually, each target-induced activated DNAzyme could catalyze the cleavage of many MB substrates through true enzymatic multiple turnovers. This would significantly enhance the sensitivity of the Hg(2+) sensing system and push the detection limit down to 0.2 nM within a 20 min assay time, much lower than those of most previously reported fluorescence assays. Owning to the strong coordination of Hg(2+) to the T-T mismatched pairs, this proposed sensing system exhibited excellent selectivity for Hg(2+) detection, even in the presence of 100 times of other interferential metal ions. Furthermore, the applicability of the biosensor for Hg(2+) detection in river water samples was demonstrated with satisfactory results. These advantages endow the sensing strategy with a great potential for the simple, rapid, sensitive, and specific detection of Hg(2+) from a wide range of real samples.     

Fluorescence quenching of anthropogenic fulvic acids by Cu(II), Fe(III) and UO(2)(2+)

The quenching of the fluorescence of three anthropogenic fulvic acids (FA) provoked by Cu(II) (pH 6.0), Fe(III) (pH 4.0) and UO₂²⁺ (pH 3.5), was analyzed by a non-linear method and by Stern-Volmer plots. The FA samples were extracted from composted sewage sludges (csFA), composted municipal wastes (mwFA) and composted livestock wastes (lsFA). Synchronous-scan fluorescence (SyF) spectra were collected as a function of metal ion concentration. Spectral data were treated by a self-modeling mixture analysis method (SIMPLISMA) to detect the SyF spectral band with the strongest quenching and to calculate the corresponding quenching profile. The analysis of these profiles by a non-linear method allowed the estimation of conditional stability constants (K) and of the percentage of non-complexing fluorophores. The same quantitative information was obtained by the modified Stern-Volmer equation taking into account the existence of fluorophores that do not participate in the complexation. Good agreement was found between the results of the two procedures. The log K calculated by the non-linear method were (standard deviation in parenthesis): csFA, Cu(II), 4.22 (5); Fe(III), 5.0 (1); UO₂²⁺, 5.2 (2); mwFA, Cu(II), 4.21 (3); Fe(III), 5.6 (2); UO₂²⁺, 4.7 (3); lsFA, Cu(II), 4.51 (8); Fe(III), 5.5 (2); UO₂²⁺, 3.6 (2).     

Prediction of vibrational frequencies of UO2(2+) at the CCSD(T) level

Electronic structure calculations at the coupled cluster (CCSD(T)) and density functional theory levels with relativistic effective core potentials and large basis sets were used to predict the isolated uranyl ion frequencies. The effects of anharmonicity and spin-orbit corrections on the harmonic frequencies were calculated. The anharmonic effects are larger than the spin-orbit corrections, but both are small. The anharmonic effects decreased all the frequencies, whereas the spin-orbit corrections increased the stretches and decreased the bend. Overall, these two corrections decreased the harmonic asymmetric stretch frequency by 6 cm-1, the symmetric stretch by 3 cm-1, and the bend by 3 cm-1. The best calculated values for UO22+ for the asymmetric stretch, symmetric stretch, and bend were 1113, 1032, and 174 cm-1, respectively. The separation between the asymmetric and the symmetric stretch band origins was predicted to be 81 cm-1, which is consistent with experimental trends for substituted uranyls in solution and in the solid state. The anharmonic vibrational frequencies of the isoelectronic ThO2 molecule also were calculated and compared to experiment to calibrate the UO22+ results.     

A DNAzyme cascade for the amplified detection of Pb(2+) ions or L-histidine

DNAzyme cascades activated by Pb(2+)- or L-histidine-dependent DNAzymes yield the horseradish peroxidase-mimicking catalytic nucleic acids that enable the colorimetric or chemiluminescence detection of Pb(2+) or L-histidine.     

Cation-cation interactions between NpO2(+) and UO2(2+) at different temperatures and ionic strengths

Cation-cation interactions between NpO(2)(+) and UO(2)(2+) were studied at different temperatures (283.15 K to 358.15 K) and different ionic strengths (3-4.5 mol dm(-3)) by spectrophotometry and microcalorimetry. The cation-cation complex between NpO(2)(+) and UO(2)(2+) was weak and became stronger as the temperature was increased from 283.15 K to 358.15 K. The molar enthalpy of complexation was directly determined for the first time by microcalorimetry to be (4.2 ± 1.6) kJ mol(-1) at 298.15 K, in good agreement with the trend in the stability constant at different temperatures. The small and positive enthalpy and entropy of complexation support the argument that the cation-cation complex between NpO(2)(+) and UO(2)(2+) is of inner-sphere type. At each temperature, the stability constants of the cation-cation complex were found to increase as the ionic strength was increased. The specific ion interaction theory (SIT) was used to obtain the stability constants at infinite dilution and variable temperatures.     

Investigation of reaction conditions on synthesis of UO2.34 and UO2 via hydrothermal route

Journal of Radioanalytical and Nuclear Chemistry - Spherical UO2.34 nanoparticles were firstly prepared by reactions of 0.01 or 0.05 M of UO2(NO3)2 with 0.025–0.04 or...     

Adsorption and reaction of SO2 with a polycrystalline UO2 film: promotion of S-O bond cleavage by creation of O-defects and Na or Ca coadsorption

To characterize UO(2) for its possible use in desulfurization applications, the interactions of molecular sulfur dioxide (SO(2)) with a polycrystalline uranium dioxide film have been studied by means of X-ray photoelectron spectroscopy (XPS), temperature-programmed desorption (TPD), and low-energy ion scattering (LEIS). The stoichiometric, oxygen-deficient, calcium-precovered and sodium-precovered UO(2) surfaces have been characterized. The changes in oxide reactivity upon creation of oxygen vacancies and coadsorption of sodium and calcium have been studied. After creation of a reduced UO(2-x) surface (x approximately 0.44) via Ar(+) sputtering, the U 4f XPS spectrum shows conspicuous differences that are good indicators of the surface stoichiometry. Molecular SO(x) formation (x = 2-4) is observed after SO(2) deposition onto stoichiometric UO(2) and onto UO(2) precovered with small amounts (<1 ML) of Na or Ca; complete dissociation of SO(2) is not observed. Heating leads to desorption of the SO(x) species and to transformation of SO(2) to SO(3) and SO(3) to SO(4). On oxygen-deficient UO(2) and on UO(2) precovered with large Na or Ca coverages (> or =4 ML), both the formation of SO(x)= species and complete dissociation of SO(2) are observed. A higher thermal stability of the sulfur components is observed on these surfaces. In all cases for which dissociation occurs, the XPS peak of atomic sulfur shows similar structure: three different binding states are observed. The reactivity of oxygen-deficient UO(2) and sodium- and calcium-precovered UO(2) (coverages > or = 4 ML) is attributed to charge transfer into the antibonding LUMO of the adsorbed molecule.     

Resonance scattering spectral detection of trace ATP based on label-free aptamer reaction and nanogold catalysis

Double-stranded DNA (dsDNA) cannot protect gold nanoparticles (AuNPs) in the presence of NaCl, and dsDNA interacted with adenosine triphosphate (ATP) to form stable G-quartet and a single-stranded DNA (DNA 2) that can protect AuNPs. The unprotected AuNPs were aggregated to AuNP aggregations (AuNPA) that exhibited a resonance scattering (RS) peak at 590 nm. The RS intensity at 590 nm decreased linearly when the ATP concentration increased in the range of 6.6-110 nM. The catalysis of AuNP-DNA 2 was stronger than that of the AuNPA on the glucose-Cu(II) particle reaction, and the product appeared as an RS peak at 620 nm. When the ATP concentration was increased, the AuNP-DNA 2 increased, and the RS intensity at 620 nm increased linearly. The increased RS intensity (ΔI(620 nm)) was linear to ATP concentration in the range of 2.2-220 nM, with a regression equation of ΔI(620 nm) = 0.709C + 7.7, and a detection limit of 0.5 nM. Hereby, a new RS method of ATP detection was set up with high sensitivity and selectivity.     

Colorimetric and fluorescence sensing of anions using thiourea based coumarin receptors

Thiourea-containing coumarins 1, 2 have been designed and synthesized via reaction of 6-aminomethylcoumarin and the corresponding isothiocyanates. Their anion-binding ability has been examined using UV-vis, fluorescence and ¹H NMR. The anion recognition takes place through charge neutral thiourea receptor sites with concomitant fluorescence quenching of the coumarin moiety with 1 showing a strong binding to C₆H₅COO⁻ over F⁻ with a distinct change in color.