Crystal structure of self-assembled inclusion complex of symmetric dicyclohexanocucurbit[6]uril with 1H-benzotriazole

The host and guest supramolecular interactions between symmetric dicyclohexanocucurbit[6]uril (CyH₂Q[6]) and 1H-benzotriazole (BTA) were investigated using nuclear magnetic resonance spectroscopy, isothermal titration calorimetry (ITC), MALDI-TOF mass spectrometry and single-crystal X-ray diffraction analysis. From the experimental results, it was concluded that there was a 1:1 mode of inclusion in BTA@CyH₂Q[6]. In addition, the benzene ring of the BTA molecule entered the cavity of CyH₂Q[6], while the triazole part was at the port of the CyH₂Q[6], forming a supramolecular framework. According to ITC, the complexation process for BTA with CyH₂Q[6] is exothermic and mainly driven by enthalpy.

     

六元瓜环与磺基水杨酸主客体配合物的晶体结构

合成了六元瓜环与磺基水杨酸主客体配合物,并测定了其单晶结构.晶体结构表明六元瓜环包结了3个水分子,磺基水杨酸位于六元瓜环的外侧,且与水分子通过氢键与六元瓜环相连,瓜环之间通过端口的羰基O原子、磺基水杨酸以及水分子间的氢键作用形成一维超分子.     

A hemicyanine and cucurbit[n]uril inclusion complex: competitive guest binding of cucurbit[7]uril and cucurbit[8]uril

The interaction between the hemicyanine indole derivative H and the cucubit[n]urils Q[7] and Q[8] has been studied using ¹H NMR and UV spectroscopy as well as by fluorescence experiments. Competitive studies on the inclusion of H by Q[7] and Q[8] have also been conducted, and reveal that on changing the size of the Q[n] cavity, the binding behaviour can be very different.     

Supramolecular shuttle based on inclusion complex between cucurbit[6]uril and bispyridinium ethylene

Cucurbit[6]uril (CB6) and bispyridinium ethylene form a stable inclusion complex. A rotaxane derived from this complex was prepared in which a CB6 wheel shuttles along an axle in an NMR time-resolved regime.     

羟基葫芦[6]脲与孟加拉红包结作用的荧光光谱研究

采用荧光光谱法研究了羟基葫芦[6]脲(HOCB[6])对孟加拉红(TSS)的包结作用,考察了HOCB[6]浓度、缓冲液pH、温度、包结时间、有机溶剂等因素对包结作用的影响,结果表明,体系的荧光强度随着HOCB[6]浓度的升高而增强,呈现显著荧光增敏现象,同时荧光峰位有一定蓝移,Hildebrand-Benesi法计算结果显示HOCB[6]与TSS形成了1∶1的包结配合物,包结反应的热力学参数表明该包结过程为自发放热过程,这可能是主客体分子之间的疏水作用与离子偶极作用所引起的。     

十二甲基六元瓜环包结1,4-二烷噁的晶体结构

合成了全甲基取代六元瓜环(Me_(12)Q[6])与1,4-二噁烷的包结配合物并生长了晶体,通过单晶X-射线衍射方法进行了表征;该配合物形成了以Me_(12)Q[6]为"胶囊体"、1,4-二噁烷为"胶囊"芯材、水分子为"胶囊盖"的"分子胶囊"结构,"分子胶囊"通过氢键自组装形成一维超分子链,而一维的超分子链通过Me_(12)Q[6]端口的羰基氧原子与水分子之间的氢键作用横竖交错组成二维具有空洞结构的分子网.     

Binding behaviors of para-dicyclohexanocucurbit[6]uril and meta-tricyclohexanocucurbit[6]uril with dialkyl viologens

The binding behaviours of para-dicyclohexanocucurbit[6]uril (Cy₂Q[6]) and meta-tricyclohexanocucurbit[6]uril (Cy₃Q[6]) with a series of dialkyl viologens (MV²⁺, EV²⁺, PV²⁺, BV²⁺, FV²⁺ and HV²⁺) have been investigated by various methods. In the aqueous solution, ¹H NMR spectra suggest that the alkyl chains are more favourably encapsulated into the hydrophobic cavities of both hosts than the aromatic rings. Cyclic voltammograms (CV) curves show that the Cy₂Q[6] or Cy₃Q[6] bind the charged viologens more strongly than the reduced viologens. Isothermal titration calorimetry (ITC) data reveal that the binding processes of both hosts with viologens are enthalpic driven. In the solid state, the PV²⁺, BV²⁺ guests and two Cy₃Q[6] hosts generated dumbbell-shaped structures, with two Cy₃Q[6] hosts residing over two terminal alkyl chains of the guests.     

Cucurbit[5]uril, Decamethylcucurbit[5]uril and Cucurbit[6]uril. Synthesis, Solubility and Amine Complex Formation

A simple way to prepare cucurbit[5]uril is described. The macrocycles of the cucurbituril type are nearly insoluble in water. The solubilities of cucurbit[5]uril, decamethylcucurbit[5]uril and cucurbit[6]uril in hydrochloric acid, formic acid and acetic acid of different concentrations have been investigated. Due to the formation of complexes between cucurbit[n]urils and protons the solubility increases in aqueous acids. The macrocyclic ligands are able to form complexes with several organic compounds. Thus, the complex formation of the cucurbituril macrocycles with different amines has beenstudied by means of calorimetric titrations. The reaction enthalpy gives noevidence of the formation of inclusion or exclusion complexes. ¹H-NMR measurements show that in the case of cucurbit[5]uril and cucurbit[6]uril the organic guest compound is included within the hydrophobic cavity. Decamethylcucurbit[5]uril forms only exclusion complexes with organicamines. This was confirmed by the crystal structure of the decamethylcucurbit[5]uril-1,6-diaminohexane complex.     

Crystal structure of a La(III) complex with macrocyclic cavitand cucurbit[6]uril

Slow evaporation in air of a lanthanum nitrate solution containing macrocyclic cavitand cucurbit[6]uril yields a complex of the composition of [La(H₂O)₆(X@C₃₆H₃₆N₂₄O₁₂)(NO₃)](NO₃)₂· 6.96H₂O (X = 0.5C₅H₅N + 0.5H₂O). The complex is structurally characterized using single crystal X-ray diffraction. Lanthanum atoms are coordinated with oxygen atoms of carbonyl groups of cucurbit[6]uril portals. The compound crystallizes in the orthorhombic crystal system, space group Pnn2, unit cell parameters (150 K): a = 11.997(2) Å, b = 17.093(3) Å, c = 14.133(3) Å, V = 2899.3(10) ų, Z = 2. Lanthanum atoms are disordered, alternative positions being related by the two-fold axis. The complex has an island structure. A pyridine molecule occupies an internal cavity of one half of cucurbit[6]uril molecules, while a water molecule occupies the other.     

A novel 1:2 cucurbit[8]uril inclusion complex with N-phenylpiperazine hydrochloride

A new 1:2 inclusion complex of cucurbit[8]uril (CB[8]) and protonated N-phenylpiperazine was synthesized and characterized by ¹H NMR and X-ray crystallography. The crystal structure showed that the phenyl rings of the two equivalents of guest encapsulated in the cavity of CB[8] are parallel to one another with a mean plane separation of 3.899 Å. In contrast, the piperazinyl phenyl ammonium moieties slightly protrude from the ureidyl carbonyl lined portals in order to accommodate the ion–dipole interaction between host and guest which provides a substantial driving force for the assembly. The oxygen atoms of the carbonyl groups form hydrogen bonds with the hydrogen atoms in both bridging methylene groups of CB[8] and water molecules. There are also hydrogen bonds formed among CB[8], water, and the protonated piperazinyl rings. These hydrogen bonds are formed between the ureidyl C=O groups and hydrogens in methylenes of piperazinyl rings; through hydrogen bonding N⁺–H···O(H)–H···O=C. The protonated piperazinyl rings connect the carbonyl groups with the bridging water molecules.     

臭氧氧化法合成全羟基葫芦[6]脲

葫芦脲(CB[n])的直接衍生化一直是一项难题。本文用臭氧氧化法将CB[6]衍生化,合成全羟基葫芦[6]脲((OH)12CB[6])。CB[6]与O3在20℃下反应 22h,生成(OH)12CB[6]的产率为44%,并探究了丙酮扩散法、柱层析法和DMSO提纯法三种去除无机盐的方法的可行性。臭氧由电解水制得,成本低,没有二次污染,且臭氧氧化能力强,在室温下即可氧化葫芦脲。本文为合成全羟基葫芦脲提供了新的方法。     

Synthesis and binding behaviors of monomethyl cucurbit[6]uril

By reacting 3a-methylglycoluril and glycoluril with paraformaldehyde, monomethyl cucurbit[6]uril was synthesized in 14% yield. The new host molecule forms stable inclusion complexes with diamine and hexylaminocarbazole derivatives.     

含有葫芦[6]脲的新型准轮烷的合成

通过葫芦[6]脲(CB[6])与两个质子化的1,4-丁二胺在水溶液中于室温下进行超分子自组装, 得到一种新型的准轮烷. 通过¹H NMR, 质谱和¹H ROESY NMR对其结构进行了表征, 证实CB[6]位于质子化1,4-丁二胺的脂肪链上, 通过非共价键与1,4-丁二胺结合, 并且主体(CB[6])与客体的结合的物质的量之比为2∶1.     

Synthesis of disubstituted cucurbit[6]uril and its rotaxane derivative

Synthesis of diphenyl cucurbit[6]uril (CB[6]) has been achieved via co-oligomerization of diphenyl glycoluril and unsubstituted glycoluril. The unsymmetrically substituted CB[6], Ph(2)CB[6], was further converted to a rotaxane incorporating bis(dinitrophenyl)spermine. [reaction: see text]     

Ion binding to cucurbit[6]uril: structure and dynamics

Molecular dynamics simulations are used to study the microscopic structure and dynamics of cations bound to cucurbit[6]uril (CB[6]) in water and in aqueous solutions of sodium, potassium, and calcium chloride. The molarities are 0.183 M for the salts and 0.0184 M for CB[6]. The cations bind only to CB[6] carbonyl oxygens. They are never found inside the CB[6] cavity. Complexes with Na(+) and K(+) mostly involve one cation, whereas with Ca(2+) single- and double-cation complexes are formed in similar proportions. The binding dynamics strongly depends on the type of cation. A smaller size or higher charge increases the residence time of a cation at a given carbonyl oxygen. When bound to CB[6], sodium and potassium cations jump mainly between nearest or second-nearest neighbors. Calcium shows no hopping dynamics. It is coordinated predominantly by one CB[6] oxygen. A few water molecules (zero to four) can occupy the CB[6] cavity, which is limited by the CB[6] oxygen faces. Their residence time is hardly influenced by sodium and potassium ions. In the case of calcium the residence time of the inner water increases notably. A simple structural model for the cation activity as "lids" over the CB[6] portal cannot, however, be identified. The slowing of the water exchange by the ions is a consequence of the generally slower dynamics in their presence and of their stable solvation shells.     

Supramolecular drug inclusion complex constructed from cucurbit[7]uril and the hepatitis B drug Adefovir

The interaction between cucuribit[7]uril (Q[7]) and Adefovir (ADV) has been studied in aqueous solution by ¹H NMR spectroscopy, electronic absorption spectroscopy, Isothermal Titration Calorimetry and mass spectrometry. The results revealed that an inclusion complex was formed via encapsulation of the purine rings of the guest ADV, while the phosphonomethoxyethyl group was prevented from entering the cavity. ITC data revealed that the formation of this 1:1 inclusion complex is mainly driven by favourable enthalpy changes. Studies investigating the release of ADV from the inclusion complex revealed enhanced rates under acidic conditions, although the rates were slower than observed for the free guest under the same conditions. Thermal stability studies indicated that the included form of ADV was more stable that the free form.     

Binding modes of cucurbit[6]uril and cucurbit[7]uril with a series of bis-pyridinium compounds

Binding behaviors of cucurbit[6]uril (CB[6]) and cucurbit[7]uril (CB[7]) with a series of bis-pyridinium compounds N, N’-hexamethylenebis(1-alkyl-4-carbamoyl pyridinium bromide) (HBPB-n) (alkyl chain length, n = 6, 8 and 10) guests were investigated using ¹H-NMR, ESI–MS and single crystal X-ray diffraction methods. The results show that CB[6] and CB[7] can form [2]pseudorotaxanes with HBPB-n easily. When increasing the length of tail alkyl chain, the binding site of CB[6] at guest molecules changed from the tail to the middle part, while CB[7] remained located over the tail chain. As CB[6] and CB[7] were added in HBPB-8 aqueous solution, a [3]pseudorotaxane was formed by the inclusion of the internal middle site in CB[6] and the tail chain in CB[7].