Escherichia coli-catalyzed bioelectrochemical oxidation of acetate in the presence of mediators

Bioelectrocatalytic oxidation of acetate was investigated under anaerobic conditions by using Escherichia coli K-12 (IFO 3301) cells cultured on aerobic media containing poly-peptone, glucose or acetate as the sole carbon source. It was found that all E. coli cells cultured on the three media work as good catalysts of the electrochemical oxidation of acetate as well as glucose with Fe(CN)6(3-), 2,3-dimethoxy-5-methyl-1,4-benzo-quinone (Q0), 2,6-dichloro-indophenol, or 2-methyl-1,4-naphthoquinone as artificial electron acceptors (mediators). Acetate-grown E. coli cells exhibited the highest relative activity of the acetate oxidation against the glucose oxidation. On the other hand, all the artificial electron acceptors used work as inhibitors for the catalytic oxidation of acetate at increased concentrations. The inhibition phenomenon can be interpreted in terms of competitive substrate inhibition as a whole. Apparent values of Michaelis constant, catalytic constant, and inhibition constant were evaluated by amperometric methods. Q0 is an effective artificial mediator as evidenced by a large reaction rate constant between the cell and Q0 at least at low concentrations (<50 microM). However, Fe(CN)6(3-) is a promising mediator in biosensor applications because the inhibition constant is very large and it works as an electron acceptor even under aerobic conditions.     

Time-resolved selected ion flow tube mass spectrometric quantification of the volatile compounds generated by E. coli JM109 cultured in two different media

Preliminary measurements have been made of the volatile compounds emitted by the bacterium E. coli JM109 cultured in the commonly used media Dulbecco's modified Eagle's medium (DMEM) and lysogeny broth (LB) using selected ion flow tube mass spectrometry, SIFT-MS, as a step towards the real time, non-invasive monitoring of accidental infections of mammalian cell cultures. In one procedure, the culture medium alone and the E. coli cells/medium combination were held at 37 °C in bottles sealed with septa for a given time period, usually overnight, to allow the bacterium to proliferate, after which the captured headspace was analysed directly by SIFT-MS. Several compounds were seen to be produced by the E. coli cells that depended on the liquid medium used: when cultured in DMEM, copious amounts of ethanol, acetaldehyde and hydrogen sulphide were produced; in LB ammonia is the major volatile product. In a second procedure, to ensure aerobic conditions prevailed in the cell culture, selected volatile compounds were monitored by SIFT-MS in real time for several hours above the open-to-air E. coli/DMEM culture held at close to 37 °C. The temporal variations in the concentrations of some compounds, which reflect their production rates in the culture, indicate maxima. Thus, the maxima in the ethanol and acetaldehyde production are a reflection of the reduction of glucose from the DMEM by the vigorous E. coli cells and the maximum in the hydrogen sulphide level is an indication of the loss of the sulphur-bearing amino acids from the DMEM. Serendipitously, emissions from DMEM inadvertently infected with the bacterium C. testosteroni were observed when large quantities of ammonia were seen to be produced. The results of this preliminary study suggest that monitoring volatile compounds might assist in the early detection of bacterial infection in large-scale bioreactors.     

重组大肠杆菌细胞不对称还原4-氯乙酰乙酸乙酯合成(R)-(+)-4-氯-3-羟基丁酸乙酯

 从赭色掷孢酵母(Sporobolomyces salmonicolor ZJU0105)中克隆出NADPH依赖型醛基还原酶基因,构建了重组大肠杆菌E.coli BL21(pET28-ALR0105), 该工程菌可以高效地表达醛基还原酶. 将重组细胞用于催化4-氯乙酰乙酸乙酯不对称还原,合成出具有光学活性的(R)-(+)-4-氯-3-羟基丁酸乙酯. 实验发现,在加入适量辅酶及辅酶再生酶的条件下,利用重组细胞催化还原反应可以获得比使用赭色掷孢酵母更高的转化率、产率和ee值,得到了几乎是光学纯的(R)-(+)-型产物,从而解决了酵母细胞催化此类反应ee值较低的问题. 考察了辅酶及共底物的添加、底物和产物的浓度、pH值、温度以及菌体密度等因素对还原反应的影响. 结果表明,不对称还原反应必须在辅酶NADPH和辅酶再生酶系及共底物葡萄糖的参与下进行; 底物和高浓度的产物对还原反应有一定的抑制作用; 当pH＞6.0时,反应的转化率及产率都显著降低; 高密度重组细胞可以减小底物的抑制作用.     

Kinetics of growth and metabolism ofClostridium thermosaccharolyticum culture

The kinetics of growth and metabolism of Clostridium thermosaccharolyticum DSM 571 has been studied at varying initial pH and glucose concentration. A weak inhibitory effect of excess glucose on the specific growth rate has been shown. The effect of antibiotics of various classes on culture growth and hydrogen evolution has been studied. Streptomycin and kanamycin resistance of this culture has been revealed as well as the phenomenon of increased hydrogen production in the presence of the above antibiotics. New plasmids, pNB1 (4.9 kb) and pNB2 (2.0 kb), were isolated from C. thermosaccharolyticum DSM 571. The restriction analysis of pNB1 and pNB2 has been performed.     

Hydrogen Evolution from Glucose with the Combination of Glucose Dehydrogenase, Ferredoxin NADP Reductase and Hydrogenase from A. Eutrophus H16

Hydrogen evolution system from glucose consisting of glucose dehydrogenase from Bacillus sp., ferredoxin NADP reductase from spinach leaves and hydrogenase from Alcaligenes eutrophus H16 was established. When the solution containing glucose, glucose dehydrogenase, NAD, ferredoxin NADP reductase, methyl viologen and hydrogenase was incubated at 30°C, hydrogen evolution was observed.     

Decomposition kinetics of the AlH3 polymorphs

Aluminum hydride polymorphs (alpha-AlH3, beta-AlH3, and gamma-AlH3) were prepared by organometallic synthesis. Hydrogen capacities approaching 10 wt % at desorption temperatures less than 100 degrees C have been demonstrated with freshly prepared AlH3. The temperature-dependent rate constants were determined by measuring the isothermal hydrogen evolution between 60 degrees C and 140 degrees C. Fractional decomposition curves showed good fits using both the second and third-order Avrami-Erofeyev equations, indicating that the decomposition kinetics are controlled by nucleation and growth of the aluminum phase in two and three dimensions. The large activation energies measured for the AlH3 polymorphs suggest that the decomposition occurs via an activated complex mechanism with complexes consisting of approximately nine AlH3 molecules (1-2 unit cells for alpha-AlH3).     

A rapid method for detection of catalase-positive and catalase-negative bacteria based on monitoring of hydrogen peroxide evolution at a composite peroxidase biosensor

The rapid detection of catalase-positive and catalase-negative bacteria in complex culture media has been accomplished by monitoring of hydrogen peroxide consumption or generation with a graphite-Teflon-peroxidase-ferrocene composite electrode. Escherichia coli and Streptococcus pneumoniae have been used as model catalase-positive and catalase-negative bacteria, respectively. Hydrogen peroxide evolution was amperometrically measured at 0.00 V. Experimental conditions, including the working solution composition, the incubation time and the hydrogen peroxide concentration, were optimized. The reusability of the biosensor was improved by placing a nylon membrane on the bioelectrode surface to prevent fouling caused by the bacterial medium. The developed methodology allowed the detection of E. coli and S. pneumoniae at concentration levels of approximately 2x10(6) and 2x10(5) cfu/mL, in assays taking 10 and 15 min, respectively, without any pre-concentration step or pre-enrichment procedure.     

Ultrasound assisted biobleaching of cotton

In this study, the effect of ultrasound on the activity of the glucose oxidase (GOx) enzyme for bleaching of the cotton fabrics was investigated. Hydrogen peroxide generation with the GOx enzyme from glucose was carried out under ultrasonic homogenizer (UH) and ultrasonic bath support. The aim of using ultrasonic support was to increase the yield of the enzyme reactions. The enzymatically generated hydrogen peroxide was used for bleaching of cotton fabrics. The bleaching process was performed at 90 °C and pH 11 (with NaOH) for 60 min, followed by rinsing at 70 and 50 °C then cold washing. The whiteness degrees of the cotton samples that were bleached by the generated peroxide were compared to the whiteness degrees of the conventionally bleached cotton fabrics. Sufficient whiteness degrees in cotton fabrics could be obtained by enzymatically generated hydrogen peroxide by UH support. The initial whiteness degree of the cotton fabric was 59.9 Stensby degrees; the whiteness was increased to 75.6 Stensby degrees by the GOx enzyme under UH support where the conventional bleaching process yielded a whiteness value of 76.7 Stensby degrees. For efficient cotton bleaching by the GOx enzyme, UH support contributed to the concentration of enzymatically generated hydrogen peroxide by the GOx enzyme. Bleaching of cotton by the GOx enzyme was approved as a more environmentally friendly process compared to the conventional bleaching method in respect of the results of chemical oxygen demand tests.     

Reversible storage of molecular hydrogen by sorption into multilayered TiO2 nanotubes

The sorption of hydrogen between the layers of the multilayered wall of nanotubular TiO2 was studied in the temperature range of -195 to 200 degrees C and at pressures of 0 to 6 bar. Hydrogen can intercalate between layers in the walls of TiO2 nanotubes forming host-guest compounds TiO2 x xH2, where x < or = 1.5 and decreases at higher temperatures. The rate of hydrogen incorporation increases with temperature and the characteristic time for hydrogen sorption in TiO2 nanotubes is several hours at 100 degrees C. The rate of intercalate formation is limited by the diffusion of molecular hydrogen inside the multilayered walls of the TiO2 nanotube. 1H NMR-MAS and XRD data confirm the incorporation of hydrogen between the layers in the walls of TiO2 nanotubes. The nature and possible applications of the observed intercalates are considered.     

L-asparaginase release from Escherichia coli cells with aqueous two-phase micellar systems

A method was proposed to release and separate L-asparaginase (EC 3.5.1.1) from Escherichia coli ATCC 11303 cells with aqueous two-phase micellar systems. The systems were composed of K2HPO4 and Triton X-100. The method combines enzyme release with enzyme purification. The influence of Triton X-100 concentration, K2HPO4 concentration, and pH on the release and partition of L-asparaginase was investigated. Experimental results showed that E. coli cells treated with 9.4% (w/v) K2HPO4 and 15% (w/v) Triton X-100 at 25 degrees C for 15-20 h released nearly 80% of the enzyme. Most of the released enzyme was partitioned to the bottom phase (phosphate-rich phase). The effects of Triton X-100 concentration, K2HPO4 concentration, and pH on cloud point were also studied. Electron micrography indicated that the chemical treatment altered the inner structure of E. coli cells significantly.     

Nucleotide sequence of aminoglycoside 6'-N-acetyltransferase [AAC(6')] determinant from Serratia sp. 45.

Gene for aminoglycoside 6'-N-acetyltransferase [AAC(6')] from Serratia sp. 45 was cloned into E. coli. The enzyme produced in E. coli carrying the recombinant plasmid was compared to the Serratia enzyme. Both enzymes acetylated the 6'-C position of amikacin, dibekacin, tobramycin, sisomicin, gentamicin C1a and kanamycin but effected gentamicin C1, gentamicin C2 and micronomycin minimally. No significant difference in optimal pH, isoelectric point or molecular weight was detected. The nucleotide sequence of the gene was determined. Initiating with a GTG codon for methionine, it was composed of 552 base pair coding for 184 amino acids. The molecular weight of the enzyme was about 20418. Comparison of the amino acid sequence of this AAC(6') with the amino acid sequence of aacA4 gene from Serratia marcescens (G. Tran Van Nhieu and E. Collatz, J. Bacteriol., 169, 5708(1987)) showed 98.3% homology.     

Benzene-free synthesis of catechol: interfacing microbial and chemical catalysis

The toxicity of aromatics frequently limits the yields of their microbial synthesis. For example, the 5% yield of catechol synthesized from glucose by Escherichia coli WN1/pWL1.290A under fermentor-controlled conditions reflects catechol's microbial toxicity. Use of in situ resin-based extraction to reduce catechol's concentration in culture medium and thereby its microbial toxicity during its synthesis from glucose by E. coli WN1/pWL1.290A led to a 7% yield of catechol. Interfacing microbial with chemical synthesis was then explored where glucose was microbially converted into a nontoxic intermediate followed by chemical conversion of this intermediate into catechol. Intermediates examined include 3-dehydroquinate, 3-dehydroshikimate, and protocatechuate. 3-Dehydroquinate and 3-dehydroshikimate synthesized, respectively, by E. coli QP1.1/pJY1.216A and E. coli KL3/pJY1.216A from glucose were extracted and then reacted in water heated at 290 degrees C to afford catechol in overall yields from glucose of 10% and 26%, respectively. The problematic extraction of these catechol precursors from culture medium was subsequently circumvented by high-yielding chemical dehydration of 3-dehydroquinate and 3-dehydroshikimate in culture medium followed by extraction of the resulting protocatechuate. After reaction of protocatechuate in water heated at 290 degrees C, the overall yields of catechol synthesized from glucose via chemical dehydration of 3-dehydroquinate and chemical dehydration of 3-dehydroshikimate were, respectively, 25% and 30%. Direct synthesis of protocatechuate from glucose using E. coli KL3/pWL2.46B followed by its extraction and chemical decarboxylation in water gave a 24% overall yield of catechol from glucose. In situ resin-based extraction of protocatechaute synthesized by E. coli KL3/pWL2.46B followed by chemical decarboxylation of this catechol percursor was then examined. This employment of both strategies for dealing with the microbial toxicity of aromatic products led to the highest overall yield with catechol synthesized in 43% overall yield from glucose.     

Selective functionalization of a genetically encoded alkene-containing protein via "photoclick chemistry" in bacterial cells

We report a tetrazole-based, photoclick chemistry that can be employed to selectively functionalize an alkene genetically encoded in a protein inside E. coli cells. The reaction involved the treatment of E. coli cells with cell-permeable tetrazoles followed by a brief photo irradiation at 302 nm (4 min) and an overnight incubation at 4 degrees C. This in vivo alkene functionalization procedure was simple, straightforward, and nontoxic to E. coli cells. Additionally, fluorescent adducts were formed, facilitating the monitoring of the reaction in vivo. This reaction should offer a new tool for the study of alkene-containing proteins in living systems.     

Identification of Escherichia coli by detection of hydroquinone and uracil in the urine system

For rapid identification of Escherichia coli, changes of urinary metabolites incubated with E. coli were investigated by gas chromatography--mass spectrometry. Hydroquinone and uracil were detected and the normal urinary constituent 4-deoxythreonic acid was found to diminish in urine incubated with E. coli. Hydroquinone could not be detected in urine incubated with Klebsiella pneumoniae, Serratia marcescens or Pseudomonas aeruginosa. Although uracil was detected in normal urine, urine incubated with E. coli showed an increased uracil level. Urine incubated with K. pneumoniae, S. marcescens or P. aeruginosa evidenced no such change. A decrease of 4-deoxythreonic acid was noted in urine incubated with S. marcescens or P. aeruginosa. In 7.0 X 10(7) cells of E. coli, 0.33-2.36 micrograms of hydroquinone and 13.4-42.0 micrograms of uracil were detected after 3 h of incubation at 38 degrees C, and production was not changed after 4, 5 or 8 h of incubation. These results suggest that the detection of hydroquinone and uracil in urine is useful for rapid identification of E. coli.     

Synthesis and hydrogen absorption kinetics of V4Cr4Ti alloy

V₄Cr₄Ti alloy is synthesized by aluminothermy process followed by electron beam refining. Hydrogen absorption characteristics of the alloy have been evaluated by measuring the pressure composition isotherm (PCIT) at 57 °C temperature. Two plateau pressures are observed in the PCIT curve. Substantial decrease in the hydrogen absorption capacity of the alloy as compared to vanadium has been recorded. Hydrogen absorption kinetics of the alloy was investigated in the temperature range of 200–500 °C. Three-dimensional diffusion appears to be the rate controlling step of the hydrogen absorption. The apparent activation energy was calculated as 0.16 eV/atom-hydrogen.     

Near infrared spectral investigations of hydration of 18-crown-6 in HDO-D2O solutions at different temperatures

Near infrared spectra of solution of 6.4 M HDO in D(2)O have been obtained at 15, 25, 30, and 35 degrees C. It was observed that the bands of HDO in D(2)O occur at 1416, 1525, 1556, and 1666 nm, which are in good agreement with the similar data reported earlier by Worley and Klotz. The calculations of enthalpy change for hydrogen bond formation (DeltaH degrees ) yielded the value of -2.5+/-0.4 kcal mol(-1), which is in excellent agreement with the value reported by Walrafen. Similar spectra were recorded for 1 and 2 m 18-crown-6 (18C6) dissolved in the solution of HDO in D(2)O at different temperatures. The band positions remain unchanged, however, the variation of intensity as a function of concentration of 18C6 and temperature clearly indicate that 18C6 acts as a structure making solute. The structural temperature and DeltaH degrees values have been obtained for the 18C6 solutions. These results are explained on the basis of the stabilization of 18C6 in the D(3d) conformation through hydrogen bonding of HDO molecules [doubly hydrogen bonded, i.e. bridging, and singly hydrogen bonded] to the oxygen atoms of 18C6 molecules. Slightly different DeltaH degrees values obtained can be attributed to clathrate like structure at 1 m 18C6 concentration while at 2 m 18C6 concentration it is postulated that the hydrophobic interactions are contributing additionally.     

Roles of pH in biologic production of hydrogen and volatile fatty acids from glucose by enriched anaerobic cultures

Batch experiments were carried out to study the roles of pH in the biologic production of hydrogen and volatile fatty acids from glucose by enriched anaerobic cultures. The results showed that 95-99% of glucose in wastewater was acidified at 30 degrees C and pH 4.0-8.5. Hydrogen yield fluctuated between 1.30 and 1.57 mol of H2/mol of glucose when the reactor was operated at pH 4.0-5.0. However, a further increase in pH led to a considerable decrease in hydrogen yield, especially for the cases at pH 7.5 and 8.0. Acetate, propionate, butyrate, and ethanol were the key products of acidogenesis. Production of butyrate was favored at pH 4.0-5.0, whereas production of acetate was favored at pH 6.0-8.0. A modified Gompertz equation is able to properly describe the batch production of hydrogen from glucose. The optimum pH for the specific hydrogen production was found to be 5.5, close to 5.7, the optimum pH calculated using a semiempirical model.     

猪IL-18成熟蛋白在大肠杆菌中的表达及生物学活性鉴定

以含猪IL-18全基因的重组质粒pGEM-IL-18为模板,PCR扩增猪IL-18成熟蛋白基因.将IL-18成熟蛋白片段定向插入原核表达载体pET-28a(+)中,构建重组表达质粒pET-IL-18,转化大肠杆菌BL21(DE3),在IPTG诱导下表达融合蛋白(His-IL-18),并进行融合蛋白的纯化、生物学活性鉴定.结果表明,SDS-PAGE可检测到相对分子质量约为2.1×104的融合蛋白,westem blot证实His-IL-18能与猪IL-18单克隆抗体发生特异性反应.重组猪IL-18经纯化后,能明显刺激猪脾脏T淋巴细胞增殖反应,在Marc-145细胞上抗猪繁殖与呼吸综合征病毒的活性为2.50×103IU/mg,在PK-15细胞上抗猪伪狂犬病毒、猪细小病毒的活性分别为2.00×103和2.24×103IU/mg.表明建立的表达系统能够表达重组猪IL-18,表达的重组猪IL-18具有一定的生物学活性.     

A new Li-Al-N-H system for reversible hydrogen storage

Complex metal hydrides are considered as a class of candidate materials for hydrogen storage. Lithium-based complex hydrides including lithium alanates (LiAlH(4) and Li(3)AlH(6)) are among the most promising materials owing to its high hydrogen content. In the present work, we investigated dehydrogenation/rehydrogenation reactions of a combined system of Li(3)AlH(6) and LiNH(2). Thermogravimetric analysis (TGA) of Li(3)AlH(6)/3LiNH(2)/4 wt % TiCl(3)-(1)/(3)AlCl(3) mixtures indicated that a large amount of hydrogen (approximately 7.1 wt %) can be released between 150 degrees C and 300 degrees C under a heating rate of 5 degrees C/min in two dehydrogenation reaction steps. The results also show that the dehydrogenation reaction of the new material system is nearly 100% reversible under 2000 psi pressure hydrogen at 300 degrees C. Further, a short-cycle experiment has demonstrated that the new combined material system of alanates and amides can maintain its hydrogen storage capacity upon cycling of the dehydrogenation/rehydrogenation reactions.     

Detection of antibodies against glucose 6-phosphate isomerase in synovial fluid of rheumatoid arthritis using surface plasmon resonance (BIAcore)

We have used a surface plasmon resonance biosensor (SPR, BIACORE 2000) to detect antibodies against glucose 6-phosphate isomerase (GPI) in synovial fluids of rheumatoid arthritis (RA) and osteoarthritis (OA). Recombinant human GPI proteins fused with or without NusA were expressed in E. coli, purified to homogeneity and immobilized in flow cells of CM5 sensor chips. The flow cells immobilized with NusA protein or bovine serum albumin were used to monitor non-specific binding. Synovial fluid samples from RA patients showed a significantly higher level of binding to recombinant GPI proteins than samples from OA patients. Proteins which bound to the recombinant GPI proteins were confirmed to be immunoglobulin through the administration of anti-human immunoglobulin. NusA fusion protein was excellent for this assay because of a low background binding activity in the SPR analysis and its advantage of increased solubility in recombinant protein production. These results suggested a useful utilization of recombinant NusA-GPI fusion protein for the detection of autoantibodies against GPI in RA patients.