Supramolecular Assembly: A Comparative Structural Study of the Incorporation of Bis(2-guanidinobenzimidazolo)nickel(II) into Supramolecular Arrays

The structural effects of incorporating a non-planar neutral metal complex, bis(2-guanidinobenzimidazolo)nickel(II), into three supramolecular arrays are described. The complex has a donor-acceptor-donor (DAD) hydrogen bonding motif on each ligand and this motif is used to link it to bis(biureto)nickelate(II) ions, or to 1,8-naphthalimide or phthalimide molecules, all of which incorporate a complementary acceptor-donor-acceptor (ADA) hydrogen bonding motif. The geometry about the metal ion as well as the nature of the network of hydrogen bonds formed have significant influences on the supramolecular structure adopted. An interesting combination of intramolecular hydrogen bonding and close ~ -stacking interactions also occur in each species.     

Structural and spectroscopic studies of nickel(II) complexes with a library of Bis(oxime)amine-containing ligands

A library of tripodal amine ligands with two oxime donor arms and a variable coordinating or noncoordinating third arm has been synthesized, including two chiral ligands based on l-phenylalanine. Their Ni(II) complexes have been synthesized and characterized by X-ray crystallography, UV-vis absorption, circular dichroism, and FTIR spectroscopy, mass spectrometry, and room-temperature magnetic susceptibility. At least one crystal structure is reported for all but one Ni/ligand combination. All show a six-coordinate pseudo-octahedral coordination geometry around the nickel center, with the bis(oxime)amine unit coordinating in a facial mode. Three distinct structure types are observed: (1) for tetradentate ligands, six-coordinate monomers are formed, with anions and/or solvent filling out the coordination sphere; (2) for tridentate ligands, six-coordinate monomers are formed with Ni(II)(NO(3))(2), with one monodentate and one bidentate nitrate filling the remaining coordination positions; (3) for tridentate ligands, six-coordinate, bis(mu-Cl) dimers are formed with Ni(II)Cl(2), with one terminal and two bridging chlorides filling the coordination sphere. The UV-vis absorption spectra of the complexes show that the value of 10 Dq varies according to the nature of the third arm of the ligand. The trend based on the third arm follows the order alkyl/aryl < amide < carboxylate < alcohol < pyridyl < oxime.     

Structure of the nitrosoguanidine complexes of nickel(II) and copper(II) by X-ray crystallography and computational analysis

Using the X-ray structure of solid nitrosoguanidine (ngH), potential structures of its complex with aqueous nickel(II) were surmised. A single-crystal X-ray diffraction determination of the Ni(II) complex confirmed one of these configurations. The X-ray structural parameters were compared with the most stable gaseous configurations derived from ab initio-MO calculations. The lowest energy calculated configuration of the nickel(II) complex and the X-ray crystal structure are in excellent agreement. The neutral diamagnetic, planar, red-colored [bis(nitrosoguanidate)nickel(II)] complex, [Ni(ng)₂]°, is nitrogen coordinated in the trans configuration. It is highly insoluble in all solvents investigated, and has essentially the same crystal symmetry and unit-cell dimensions as the free ligand. In ligand crystals, two molecules have four nitrogen atoms aligned in a plane such that they are suitable for coordination to a nickel ion (1.945, 2.064?Å), when it is at the 1/2,?1/2,?1/2 unit-cell position. Furthermore, the complexes stack, as in [Ni(dmg)₂]°, placing the nickel ions in nearly perfect positions for weak metal–metal bonding between adjacent layers at the near optimum distance of 3.65(1)?Å. This results in a tight, linear macromolecule having low volatility and the extremely low solubility observed. As far as we are aware this is the first instance in which a ligand crystal structure is essentially the same as the complex it forms, with minor differences in bond distances, angles and torsion angles, and suggests some potentially unique properties and applications for this material.     

Synthesis and Molecular Structure of Bis(ethylenediamine)acetatonickel(II)hexafluoridophosphate Complex [Ni(en)2(CH3CO2)]PF6. An Unexpected Acetylacetonato Cleavage Reaction

The title complex was synthesized by an unusual reaction between [Ni(acac)₂(H₂O)₂] and ethylenediamine in water solution. The crystal structure of 1 shows the nickel(II) core in a tetragonally distorted octahedral environment coordinated to two ethylenediamine molecules and one acetate ligand. This is the first example of a mononuclear bis(ethylenediamine)nickel(II) complex, where the oxygen atoms of the auxiliary ligand are in cis configuration. The compound exhibits an extensive association between the complex cation and the respective anion through classical N–H ··· O and N–H ··· F intermolecular hydrogen bonds, which generate a supramolecular 3D arrangement in the solid state.     

Wasserstoffbrücken in 1,1‐Bis(2‐hydroxyethyl)‐3‐benzoylthioharnstoff und seinen Nickel(II)‐ und Kupfer(II)‐Chelat‐Komplexen

Hydrogen Bonds in 1,1‐Bis(2‐hydroxyethyl)‐3‐benzoylthiourea and its Nickel(II)‐ and Copper(II)‐Chelate Complexes The ligand 1,1‐bis(2‐hydroxyethyl)‐3‐benzoylthiourea HL, ( 1 ), yields with nickel(II) and copper(II) ions neutral complexes [NiL₂], ( 2 ), and [CuL₂], ( 3 ). By X‐ray structure analysis and IR spectroscopy different intramolecular hydrogen bonds (OH…O) and (OH…N) could be identified in both equally coordinated ligands of the [NiL₂] molecule. For comparison X‐ray and IR data were also estimated for 1 and 3 .     

HSAB principle and nickel(II) ion reactivity towards 1-methyhydantoin

1-Methylhydantoin and its novel nickel(II) complex [Ni(H₂O)₄(1-mhyd)₂] were prepared and identified, by elemental analysis, single crystal X-ray determination and MS methods. In addition, the complex was characterized by spectroscopic (IR, UV-Vis), magnetic and thermal techniques. The ligand reveals an interesting supramolecular architecture with both classical and non-conventional extended HB bonding networks. All rings and chains formed due to this HB bonding are embedded into the undulated pattern. A single crystal X-ray diffraction analysis of the complex shows that the nickel ion is coordinated by deprotonated hydantoin and water ligands in a N₂O₄ tetragonal arrangement. In the [Ni(H₂O)₄(1-mhyd)₂] structure both inter and intramolecular hydrogen bonds are created with the participation of water molecules.The ESI-MS method confirmed mono-nuclearity of the complex while electronic spectroscopy proved the tetragonal and pseudooctahedral geometries around the metal ion in the solid state and solution, respectively. By application of the “average environment rule”, 10Dq parameters were obtained for the hypothetical, hexa-coordinate [Ni(1-mhyd)₆] approximation or rather more realistic [Ni(1-mhyd)₃] chelate. Based on this the mhyd ligand was ranked in the spectrochemical series close to ammonia. The general consideration of the structure of the hydantoin complexes as a function of the metal ion hardness within the framework of the HSAB theory has been provided. Both the ligand and the complex were found to be non-toxic agents against breast (MCF-7), lung carcinoma epithelial (A549) and mouse fibroblasts (Balb/3T3) cancer cell lines.     

Molecular modeling study of the aggregation behavior of nickel(II), cobalt(II), lead(II) and zinc(II) bis(2-ethylhexyl) phosphate complexes

The physiochemical nature of the metal-extractant species in organic solvent has been a matter of debate over liquid-liquid extraction of transition metals by bis(2-ethylhexyl) phosphate. The aggregation behavior of nickel(II), cobalt(II), lead(II), and zinc(II) bis(2-ethylhexyl) phosphate have been investigated using molecular modeling. The recently confirmed "open" water channels rodlike reversed micelles which is in contact with the nonaqueous solvent rather than in an inner core (or "closed" water channel) of the nickel-extractant species by Ibrahim and Neuman appears to be a unique structure for such species. Lead-, cobalt- and zinc-extractant species behave in a different manner. The cobalt-extractant species form rodlike reversed micelles, but does not show the formation of any open water channel. The zinc- and lead-extractant species form ellipsoidal (or deformed spherical) reversed micelles with fewer water molecules located at the core of the micelles which is in accord with the conventional view of reversed micelles. The structural variations of the reversed micelles for the metal extracted species are in accord with the known extraction behavior of such metals when using HDEHP.     

Synthesis,crystal structure,and biological activity of a nickel(II) complex of 2-acetylpyridine N(4)-methylthiosemicarbazone

Nickel complex formulated as Ni(L)₂ (L = monodeprotonated ligand corresponding to 2-acetylpyridine N(4)-methylthiosemicarbazone, HL) has been synthesized and characterized by elemental analysis, IR spectra, and single-crystal X-ray diffraction. The complex consists of discrete monomeric molecules with octahedral nickel(II) with two anionic 2-acetylpyridine N(4)-methylthiosemicarbazones as NNS tridentate ligands coordinated to nickel via the pyridine nitrogen, azomethine nitrogen, and sulfur. Hydrogen bonds link the different components to stabilize the crystal structure. Biological studies, carried out in vitro against bacteria, fungi, and the K562 leukemic cell line have shown that the free ligand and complex show distinct differences in biological activity.     

Nickel(II) and cobalt(II) complexes of methyl(2-aminocyclopentene-1-dithiocarboxy)-S-acetate (ACDASAMe)

Nickel(II) and cobalt(II) bis-chelates of methyl(2-aminocyclopentene-1-dithiocarboxy)-S-acetate (ACDASAMe) were synthesized and characterized by spectroscopic methods and in the case of the nickel complex, X-ray single-crystal diffraction. The ligand exhibits the (N, S) coordination mode on interacting with the metal centers. The X-ray structure of the nickel(II) complex reveals a NiN₂S₂ distorted square planar coordination geometry with the ligands showing a cis configuration. There is no interaction between the –CH₂COOMe moieties of the ligand and the metal center, however intermolecular hydrogen bonds through the carbonyl group leads to the building of dimeric associations.     

Structure,cyclic voltammetry and DNA-binding properties of the bis(pyridine)bis(sparfloxacinato)nickel(II) complex

The neutral mononuclear nickel(II) complex with the quinolone third-generation antibacterial drug sparfloxacin in the presence of the nitrogen-donor heterocyclic ligand pyridine has been synthesized and characterized. Sparfloxacin is deprotonated acting as a bidentate ligand coordinated to the Ni(II) ion through the ketone oxygen and a carboxylato oxygen. The crystal structure of bis(sparfloxacinato)bis(pyridine)nickel(II), 1, has been determined with X-ray crystallography. The cyclic voltammograms of the complex have been recorded in dmso solution and in 1/2 dmso/buffer (containing 150 mM NaCl and 15 mM trisodium citrate at pH 7.0) solution and the corresponding redox potentials have been estimated. The biological activity of the complex has been evaluated by examining its ability to bind to calf-thymus DNA (CT DNA) with UV and fluorescence spectroscopies and cyclic voltammetry. UV study of the DNA-interaction of the complex has shown that it can bind to CT DNA and the DNA-binding constant has also been calculated. The cyclic voltammograms of the complex in the presence of CT DNA have shown that the complex can bind to CT DNA by the intercalative mode. Competitive study with ethidium bromide (EB) has shown that the complex can displace the DNA-bound EB indicating that the complex binds to DNA in strong competition with EB for the intercalative binding site.     

Preparation,thermoanalytical and IR study of mixed ligand complexes formed in water-1,2-ethanediol- nickel(II)-sulfate systems

Summary Mixed ligand nickel(II) complexes of different compositions were prepared with water, sulfate ion and 1,2-ethanediol as ligands. The magnetic susceptibility data, the IR spectra and the thermoanalytical curves of the complexes were recorded. Oxygen atoms bound by one or two coordinate bonds to the metal ion, or by hydrogen-bonds in the crystal state were observed. All complexes are sensitive for moisture. The bis complex proved to be the more stable complex.     

Copper(II) and nickel(II) complexes of binucleating macrocyclic bis(disulfide)tetramine ligands

Novel macrocyclic bis(disulfide)tetramine ligands and several Cu(II) and Ni(II) complexes of them with additional ligands have been synthesized by the oxidative coupling of linear tetradentate N2S2 tetramines with iodine. Facile demetalation of the Ni(II) oxidation products affords the free 20-membered macrocycles meso-9 and rac-9 and the 22-membered macrocycle 16, all of which are potentially octadentate N4S4 ligands. X-ray structure analyses reveal distinctly different conformations for the two isomers of 9; meso-9 shows a stepped conformation in profile with the disulfide groups corresponding to the rise of the step, whereas rac-9 exhibits a V conformation with the disulfide groups near the vertex of the V. No metal complexes of rac-9 have been isolated. Crystallographic studies of three Cu(II) complexes reveal that depending upon the size of the macrocyclic ligand and the nature of the additional ligands (I-, NCO-, and CH3CN), the Cu(II) coordination geometry shows considerable variation (plasticity), with substantial changes in the Cu(II)-disulfide bonding. Thus, a diiodide salt contains six-coordinate Cu(II) to which all four bridging disulfide sulfur atoms form strong equatorial bonds. In contrast, isocyanato complexes of the 20- and 22-membered macrocycles exhibit trigonal-bipyramidal Cu(II) and distorted cis-octahedral Cu(II) geometries, respectively, having only one and no short equatorially bound sulfur atoms. The coordination geometry of the latter complex can also be described as four-coordinate seesaw with two semicoordinated S(disulfide) ligands. Disulfide-->Cu(II) ligand-to-metal charge transfer absorptions of both isocyanato-containing Cu(II) species appear too weak to observe, probably because of poor overlap of the sulfur orbitals with the Cu(II) d-vacancy. The dual disulfide-bridged Ni(II) units of the crystallographically characterized octahedral Ni(II) complex of meso-9 with axial iodide and acetonitrile ligands promote substantial antiferromagnetic coupling (J = -13.0(2) cm-1).     

Syntheses and crystal structures of nickel(II), copper(II), and zinc(II) complexes with a biphenyl-bridged bis(pyrrole-2-yl-methyleneamine) ligand

The reactions of nickel(II), copper(II), and zinc(II) acetate salts with a potentially tetradentate biphenyl-bridged bis(pyrrole-2-yl-methyleneamine) ligand yielded three complexes with different coordination geometries. X-ray crystal structural analysis reveals that in the nickel(II) complex each nickel is five-coordinate, distorted trigonal bipyramid. In the copper(II) complex, each copper is four-coordinate, between square planar and tetrahedral. In the zinc(II) complex, each zinc is four-coordinate with a distorted tetrahedral geometry and the molar ratio of the zinc and ligand is 1 : 2.     

Bis[bis(methoxycarbimido)aminato]copper(II) 1‐methylpyrrolidin‐2‐one disolvate

The title compound, [Cu(C₄H₈N₃O₂)₂]·2C₅H₉NO, consists of a neutral copper complex, in which the Cu^II centre coordinates to two bis(methoxycarbimido)aminate ligands, solvated by two molecules of 1‐methylpyrrolidin‐2‐one. The complex is planar and centrosymmetric, with the Cu^II centre occupying a crystallographic inversion centre and adopting approximately square‐planar geometry. N—H...O hydrogen‐bonding interactions exist between the amine NH groups of the ligands and the O atoms of the 1‐methylpyrrolidin‐2‐one molecules. The associated units pack to form sheets.     

One‐Electron Reduction of Acenaphthene‐1,2‐Diimine Nickel(II) Complexes

New nickel‐based complexes of 1,2‐bis[(2,6‐diisopropylphenyl)imino]acenaphthene (dpp‐bian) with BF₄^? counterion or halide co‐ligands were synthesized in THF and MeCN. The nickel(I) complexes were obtained by using two approaches: 1) electrochemical reduction of the corresponding nickel(II) precursors; and 2) a chemical comproportionation reaction. The structural features and redox properties of these complexes were investigated by using single‐crystal X‐ray diffraction (XRD), cyclic voltammetry (CV), and electron paramagnetic resonance (EPR) and UV/Vis spectroscopy. The influence of temperature and solvent on the structure of the nickel(I) complexes was studied in detail, and an uncommon reversible solvent‐induced monomer/dimer transformation was observed. In the case of the fluoride complex, the unpaired electron was found to be localized on the dpp‐bian ligand, whereas all of the other nickel complexes contained neutral dpp‐bian moieties.     

Nickel(II) complexes of a thiosemicarbazone prepared from 2-Acetylpyridine

Summary The ligand 3-azabicyclo[3.2.2]nonane-3-thiocarboxylic acid 2-[1-(2-pyridinyl)ethylidene]hydrazide (HL), which is observed in an unusual tautomeric form in the solid state, and its selenium analogue (HLSe) have been used to prepare a series of nickel(II) complexes. Compounds of the general formula [NiLX] (X=Cl, Br, NCS, N₃, NO₂ or NCSe) as well as [Ni(LSe)Cl] have been found to be diamagnetic, planar complexes. A single crystal study of [NiL(NCS)] shows the deprotonated ligand bound in a tridentate mannervia its pyridyl nitrogen, imine nitrogen and the thione sulphur atom with the nitrogen atom of the thiocyanato-ligand occupying the fourth coordination position. The solids prepared from the nickel(II) salts having tetrafluoroborate, nitrate and iodide ions approximate to octahedral symmetry and have neutral HL ligands coordinated in a bidentate fashionvia the pyridine and imine nitrogens with the remaining coordination sites being occupied by the anions or water molecules. The [NiL₂] solid is also octahedral with the two deprotonated ligands bonding as tridentate groupsvia the same atoms as in the [NiLX] complexes.     

Structural and luminescence studies of nickel(II) and copper(II) complexes with (1R,2R)-cyclohexanediamine derived unsymmetric Schiff base

Unsymmetrical Schiff base obtained by the condensation reaction of (1R,2R)(-)cyclohexanediamine with 2-hydroxybenzaldehyde and 2-hydroxynaphthaldehyde was used as a ligand for copper(II) and nickel(II). The ligand and complexes were characterized by circular dichroism (CD), UV-VIS, fluorescence, IR and (1)H (NOE diff), NOESY and (13)C NMR (ligand) spectra. The X-ray crystal structures solved for (1R,2R)(-)chxn(salH)(naftalH) and Cu(II)(1R,2R)(-)chxn(sal)(naftal) revealed tetrahedral distortion of coordination sphere in the solid phase. The [Cu(1R,2R)(-)chxn(sal)(naftal)]·0.5EtOH·1.25H(2)O complex crystallized in the monoclinic chiral C2 space group with two molecules in the asymmetric unit as well as disordered ethanol and water molecules. For both molecules Cu(II) ions were found in square-planar environments and adopts conformation described as "semi-open armed", because of distinctly oriented arms according to cyclohexane ring defined by three torsion angles. The thin layers of the ligands, copper(II) and nickel(II) complexes were deposited on Si(111) by a spin coating method and characterized with scanning electron microscopy SEM/EDS and fluorescence spectra. The ligand layers exhibit the most intensive fluorescence band at 498 nm, which can be assigned to emission transition π* → n of Schiff base ligand. For copper(II) layers the most intensive band from intraligand transition at 550 nm was observed. The highest intensity band was registered for the layer obtained when rotation speed was 1000 rpm and time 20 s. The nickel(II) complex layers fluorescence spectra exhibit an intensive band at 564 nm. The emission maxima of the copper(II) and nickel(II) complexes are shifted towards longer wavelength in comparison to the free ligand layers. CD spectra of the complexes in solution are characteristic for tetrahedral planar distortion of the chelate ring. The (1)H NMR NOE diff were measured and the position of the nearest hydrogen atoms in the cyclohexane and aromatic rings were discussed, suggesting the tetrahedral distortion of the central ion of the coordination sphere in solution.     

Theoretical insights into the visible near‐infrared absorption spectra of Bis(hexafluoroacetylacetonate) copper(II) in pyridine

The density functional theory calculations were performed to investigate the specific solvent effects on the optical absorption spectrum of copper(II) hexafluoroacetylacetonate complex in pyridine. The effects of single and double coordination of pyridine molecules at axial position of bis(hexafluoroacetylacetonate) copper(II) indicate that both positions and intensities of 3d–3d electronic transitions are strongly dependent on the coordination environment around the copper(II) complex. The results indicate that the nature of the electron‐acceptor atoms in the equatorial ligands plays an important role in the number of solvent molecules in the first solvation shell of copper(II) acac systems. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Gemischtligandenkomplexe mit N-Acyl-thioharnstoffen: Die Struktur des [N-(Morpholinothiocarbonyl)-benzamidato] (3-amino-2-cyano-n-butyl-dithiocrotonato)nickel(II)

Mixed Ligand Complexes of N-Acyl-thioureas: The Structure of [N-(Morpholinothiocarbonyl)-benzamidato] (3-amino-2-cyano-n-butyl-dithiocrotonato)nickel(II) The reaction of a solution of N-(morpholinothiocarbonyl)benzamide and 3-amino-2-cyano-n-butyl-dithiocrotonate with nickel(II)-acetate tetrahydrate yields the first mixed ligand complex of N-acyl-thioureas. Its structure has been determined by an X-ray structure analysis. The coordination geometry is square planar. Bond lengths and angles are in good agreement with those of other bis and tris N-acyl-thiourea chelates.     

Electronic structure of adducts of Ni(II) and Co(II) bis-acetylacetonates with phenanthroline

The effect of an additional aromatic ligand on the electronic structure of nickel(II) and cobalt(II) bisacetylacetonates is studied by XPS and DFT (B3LYP/def2-TZVPP). An analysis of atomic charges, the geometry of compounds, the electron density distribution, and the interaction of molecular orbitals of complex components allows the conclusion about the ionic nature of the bonding between the neutral ligand and the bis-chelate.