Molecular Recognition Directed Self-Assembly of Supramolecular Architectures

This paper reviews some of our research on three classes of supra-molecular architectures which are generated via various combinations of molecular, macromolecular, and supramolecular chemistry. The ability of these supramolecular architectures to form liquid crystalline phases is determined by the shape of the self-assembled architecture and will be used to visualize it via various characterization techniques. The molecular design of selected examples of structural units containing taper-shaped exo-receptors and crown ether, oligooxyethylenic, and H-bonding based endo-receptors which self-assemble into cylindrical channel-like architectures via principles resembling those of tobacco mosaic virus (TMV), of macrocyclics which self-assemble into supramolecular rigid “rodlike” architectures and of hyperbranched polymers which self-assemble.into a willowlike architecture will be discussed. In the case of TMV-like supramolecular architectures, a comparison between various supramolecular(generated via H-bonding, ionic, and electrostatic interactions) and molecular “polymer backbones” will be made. The present state of the art of the engineering of these supramolecular architectures and some possible novel material functions derived from them will be briefly mentioned.     

Towards tobacco mosaic virus-like self-assembled supramolecular architectures

This paper discusses the molecular design of selected examples of structural units containing taper shaped exo-receptors and various crown ether, oligooxyethylenic, and H-bonding based endo-receptors, which self-assemble into cylindrical channel-like architectures via principles resembling those of tobacco mosaic virus (TMV). The ability of these structural units to self- assemble via a delicate combination of exo-and endo-recognition processes will be presented. A comparison between various supramolecular (generated via H-bonding, ionic, and electrostatic interactions) and molecular “polymer backbones” will be made. The present limitations concerning the ability to engineer the structural parameters of these supramolecular channel-like architectures and some possible novel material functions derived from them will be briefly mentioned.     

Molecular recognition directed self-assembly of tubular supramolecular architectures from building blocks containing monodendrons as exo-receptors and crown- or pseudo-crown-ethers as endo-receptors

The principles of self-assembly of tapered exo-receptors constructed from monodendrons containing crown-ether, oligooxyethylenic groups and polymer backbones as endo-receptors into tubular supramolecular architectures are described with selected examples. In the case of polymers with flexible backbones it is suggested that a helical chain conformation is induced during the assembly of its own tapered side groups. This mechanism is supported by the enhanced self-assembling ability of tapered side groups attached to a backbone with rigid helical conformation.     

Exo- und endo-Tricarbonyleisenkomplexe von bicyclischen 2,3-Dimethylidenverbindungen

Exo- and endo-Tricarbonyliron Complexes of Bicyclic 2,3-Dimethylidene Compounds. The preparation of exo- and endo-tricarbonyliron complexes (exo- and endo- 5 , -6 , -8 , and 9 ) of 2,3-dimethylidene-5-bicyclo[2.2.1]heptene( 1 ), -bicyclo[2.2.1]-heptane ( 2 ), -5-bicyclo[2.2.2]octene ( 3 ) and -bicyclo[2.2.2]octane ( 4 ) is described. The complexes are obtained by thermal reaction of the bicyclic butadienes with di-ironenneacarbonyl in hexane solution. exo- and endo- 5 are also formed photochemically from ironpentacarbonyl and 1 in pentane solution at ?35°. The structural assignment of exo- and endo -5 and -6 is based on their mass-spectra and on coordination shifts in ¹H- and ¹³C-NMR.-spectra exo- and endo -6 are correlated with exo- and endo -5 , respectively, by hydrogenation. Hydrogenation of the uncomplexed double bond in exo- and endo -5 occurs in both complexes from the exo side as shown by deuteration experiments. The free ligand 1 reacts in the same stereospecific manner.     

Liquid‐Crystalline Ionic Liquids as Ordered Reaction Media for the Diels–Alder Reaction

Liquid‐crystalline ionic liquids (LCILs) are ordered materials that have untapped potential to be used as reaction media for synthetic chemistry. This paper investigates the potential for the ordered structures of LCILs to influence the stereochemical outcome of the Diels–Alder reaction between cyclopentadiene and methyl acrylate. The ratio of endo‐ to exo‐product from this reaction was monitored for a range of ionic liquids (ILs) and LCILs. Comparison of the endo:exo ratios in these reactions as a function of cation, anion and liquid crystallinity of the reaction media, allowed for the effects of liquid crystallinity to be distinguished from anion effects or cation alkyl chain length effects. These data strongly suggest that the proportion of exo‐product increases as the reaction media is changed from an isotropic IL to a LCIL. A detailed molecular dynamics (MD) study suggests that this effect is related to different hydrogen bonding interactions between the reaction media and the exo‐ and endo‐transition states in solvents with layered, smectic ordering compared to those that are isotropic.     

Favorskii-Umlagerung in Gegenwart von 3,4-Dimethoxyfuran: 11endo-oxa-tricyclo [4.3.1.12,5]undec-3-en-10-on und Derivate

Favorskii -rearrangement in the presence of 3,4-dimethoxyfuran: preparation of 3,4-dimethoxy 11 endo -oxo-tricyclo [4.3.1.1^2,5]undec-3-en-10-one and any derivatives On treatment with sodiumhydride of 2-chloro-cyclohexanone in the presence of 3,4-dimethoxyfuran, a possible intermediate of the Favorskii-rearrangement has been trapped as 3,4-dimethoxy-11endo-oxa-tricyclo [4.3.1.1^2,5]undec-3-en-10-one ( 3 ). This new compound contains a highly nucleophilic double bond. It can be cleaved in high yield by ozonolysis to 2exo, 4exo-bis (methoxycarbonyl)-3-oxabicyclo [3.3.1]nonan-9-one ( 4 ). Addition of chlorine to 3 occurs in stereoselective exo-cis-manner to the crystalline 3exo, 4exo-dichloro-3endo,4endo-dimethoxy 11endo-oxa-tricyclo [4.3.1.1^2,5]undecan-10-one ( 5 ). Silver ion assisted hydrolysis of 5 , followed by thermal treatment of the intermediate hydrates, leads to the red 11endo-oxa-tricyclo [4.3.1.1^2,5]undecan-3,4, 10-trione ( 6 ), and methanolysis to 3,3,4,4-tetramethoxy-11endo-oxa-tricyclo [4.3.1.1^2,5]undecan-10-one ( 8 ). By photolytic decarbonylation, 8 is converted into 3,3,4,4-tetramethoxy-10-oxa-tricyclo-[4.3.1^2,5.0]decan ( 9 ).     

Substituierte 9-Oxabicyclo[4.2.1]- und 9-Oxabicyclo[3.3.1]nonane IV. endo,endo-2,5-Dihydroxy-9-oxabicyclo[4.2.1]nonan,endo, endo-, endo,exo- und exo,exo-2,6-Dihydroxy sowie endo,exo-2,7-Dihydroxy-9-oxabicyclo[3.3.1]nonan; Darstellung und Umwandlungsprodukte

The synthesis of the following compounds and reaction products thereof are described: endo, endo-2,5-dihydroxy-9-oxabicyclo[4.2.1]nonane ( 3–5 ), epimeric 2,6-dihydroxy-9-oxabicyclo[3.3.1]nonanes (endo, endo: 6–8 , exo, exo: 29–32 , and endo, exo: 43–45 ), and endo, exo 2,7-dihydroxy-9-oxabicyclo[3.3.1]nonane ( 46–50 ).     

Conformation and rotational barriers of 2-substituted 1,3-diphenylallyl anions

The conformations and the rotational barriers of the 2-substituted 1,3-diphenylallylanions $\text{1b}$–$\text{g}$ (Tab. 2) have been determined. Increasing size of the substituents leads to more $\text{exo}$,$\text{endo}$- and $\text{endo}$,$\text{endo}$-conformers at the cost of the $\text{exo}$,$\text{exo}$-species. This trend is connected with decreasing ΔG³-value sof the rotational barriers; the barriers are essentially not affected by ion pair effects, which is in contrast to the parent “allyl anion”.     

Oriented Electric Fields Accelerate Diels–Alder Reactions and Control the endo/exo Selectivity

Herein we demonstrate that an external electric field (EEF) acts as an accessory catalyst/inhibitor for Diels–Alder (DA) reactions. When the EEF is oriented along the “reaction axis” (the coordinate of approach of the reactants in the reaction path), the barrier of the DA reactions is lowered by a significant amount, equivalent to rate enhancements by 4–6 orders of magnitude. Simply flipping the EEF direction has the opposite effect, and the EEF acts as an inhibitor. Additionally, an EEF oriented perpendicular to the “reaction axis” in the direction of the individual molecule dipoles can change the endo/exo selectivity, favouring one or the other depending on the positive/negative directions of the EEF vis‐à‐vis the individual molecular dipole. At some critical value of the EEF along the “reaction axis”, there is a crossover to a stepwise mechanism that involves a zwitterionic intermediate. The valence bond diagram model is used to comprehend these trends and to derive a selection rule for EEF effects on chemical reactions: an EEF aligned in the direction of the electron flow between the reactants will lower the reaction barrier. It is shown that the exo/endo control by the EEF is not associated with changes in secondary orbital interactions.     

The 1H NMR spectra of some norbornene derivatives,a LIS study

The ¹H NMR spectra of 2-exo-hydroxymethyl-3-endo-methylnorbornene and the corresponding 2-endo-3-exo isomer have been completely assigned with the aid of lanthanide reagents. This enabled a full analysis of the unusual spectrum of 2-exo-hydroxy-methyl-3-endo-methylnorbornene to be undertaken, confirming the proposed structure. The ΔEu values for 2-exo-hydroxymethyl-3-endo-methylnorbornene and the 2-endo-3-exo-isomer have been used to test the effect of rotational averaging on the calculated pseudo contact shifts. Good agreement is obtained for a dynamic model in which the Eu atom exchanges between two sites on the oxygen atom of the OH bond, and in which the rotational equilibrium about the CH? CH₂OH bond is explicitly considered.     

Modular construction for the programmed assembly of molecular crystals and liquid crystals

This research aims to develop schemes for the programmed assembly of molecular materials. The underlying premise guiding this work is that structural information stored in the molecular constituents dictates their condensed phase organization (i.e. through the sum of all non-covalent interactions). The challenge then is to design molecular building blocks that encode this information in a decipherable manner. Our approach has relied on the use of organic nanoarchitectures, which we believe will serve as “modular units” for programmed assembly. Large molecules of well defined constitution and geometry offer the advantage that a high level of information can be incorporated into a single unit. The design and synthesis of nanoscale macrocyclics and macrobicyclics for this purpose has been achieved. Studies on the solution aggregation of the macrocyclics have provided a unique opportunity to glimpse some of the interactions which may influence solid state ordering. These building blocks are being used for the rational design of novel materials such as porous organic crystals and tubular mesophases.     

13C NMR spectroscopy of four tertiary methyl norbornenols and norbornanols

Carbon chemical shifts and direct ¹³C? ¹H coupling constants of 2-endo-methyl-5-norbornen-2-exo-ol, 2-exo-methyl-5-norbornen-2-endo-ol, 2-endo-methylnorbornan-2-exo-ol and 2-exo-methylnorbornan-2-endo-ol have been measured from single samples using a dual probe pulse Fourier transform method.     

NMR studies on bridged polycyclic compounds: Spin system transitions due to induced solvent shifts

An NMR study of some bridged bicyclo and tricyclo compounds yielded unusual spectra with respect to solvent effects and virtual coupling. As is the general case for most large polycyclic systems a complete analysis of the spectrum is not possible and the structural details derived from NMR are based on a partial analysis of the spectrum. If the accessible resonances correspond to protons adjacent to methylene groups, the resonance patterns and the chemical shifts may be strongly dependent upon solvent. For 6-endo-hydroxy, bicyclo[2.2.1]heptane-2,endo-carboxylic acid lactone (1), 6-endo-hydroxy, 2-exo-methyl-bicyclo[2.2.2]octane-2-endo-carboxylic acid lactone (2), and exo-3,4,exo-8,9-diepoxy, endo-tricyclo[5,2,1,0^2,6]decane (3), resonances for each fall in this class and the change induced by solvent are attributed to virtual coupling as well as a change in the overall splitting pattern.     

Die Hydrolyse von 6exo-substituierten 2exo- und 2endo-Norbornylestern der p-Toluolsulfonsäure. Norbornanreihe. 3. Mitteilung

The Hydrolysis of 6 exo -Substituted 2 exo - and 2 endo -Norbornyl p -Toluenesulfonates. Norbornane Series. Part 3 Hydrolysis of the 6exo-substituted 2exo- and 2endo-norbornyl p-toluenesulfonates 1b - 1 and 2b - 1 , respectively, in 70% dioxane led to different amounts of the following products: Unrearranged 2exo-norbornanols 3 and norbornenes 5 , accompanied in somes cases by small amounts of the rearranged Rendo-epimers 4 and 6 and by norticyclenes 7 . When the 6exo-substituent was a nucleophilic group as in 1e - 1 and 2e - 1 , various amounts of tricyclic products were also formed by endo-cyclization. These results show that the 2exo- and 2endo-esters 1 and 2 , respectively, react by way of different intermediates. In cases where the 6exo-substituent was an n-electron donor, as in 1m - r and 2m - r , quantitative fragmentation to (3-cyclopentenyl)acetaldehyde (13) occurred.     

About the structure of phosphorus ylids: Electron distribution and geometry

Using ¹³C-chemical shifts as a probe for the electronic environment of carbon centers, triphenylphosphoniomethanide, the model case of a “reactive” phosphorus ylid, was found to have much more zwitterion than PC double bond character (resonance structure 1a being dominant). Triphenylphosphonio-propenide (“triphenylphosphonium-allylid”), a “moderated” ylid, accumulates electron excess mainly at the α-carbon atom (resonance structure 6a being dominant) whereas triphenylphosphonio-ethenoate (formyl-methylene-triphenylphosphorane) and other “stabilized” ylids carry roughly equal fractions of negative charge at the α-carbon and the oxygen atom (resonance formulas a and b being of comparable importance). The one-bond C,H coupling constant of triphenylphosphonio-methanide ( 1 ) argues against a perfectly planar ylid center. The three-bond P,C coupling constants permit the assignment of endo- or exo-configurations to ylids having an allyl-type side-chain.     

Guest Covalent Capture by a Host: A Biomimetic Strategy for the Selective Functionalization of a Cavity

A biomimetic strategy for the monofunctionalization of a calix[6]arene core is described. It is based on host–guest chemistry (mimicking the Michaelis–Menten adduct in enzymes) and allows the finely tuned pre‐organization of the substrate (an alkyne) with respect to the reactant (three azido groups introduced at the calixarene large rim). It is shown that the thermal Huisgen reaction implemented in this work proceeds under very mild conditions with total regioselectivity of the cycloaddition process. The scope of the reaction was explored and the results suggest that such a supramolecular strategy is quite versatile and could be applied to the selective functionalization of other cavitands bearing different recognition patterns. A detailed structural, thermodynamic, and kinetic study is also reported, highlighting interesting biomimetic features: The importance of the host–guest adduct strength, the high sensitivity of the reaction to the pre‐organization of the reactive partners (alkyne vs. azide), and a significant impact of the embedment on the transition state. The self‐coordination of the monofunctionalized products was also studied and an “endo/exo” switch of the internal side‐chain could be triggered by adding competitive ligands.     

NMR-Untersuchungen an Dicyclopentadienderivaten: II.—13C-NMR: γ-gauche-Effekt in Abhängigkeit von der exo/endo-Isomerie an Dicyclopentadien diolen

The ¹³C FT n.m.r. spectra of some exo- and endo-dihydro- and tetrahydrodicyclopentadiene-9,10-diols(exo/exo or endo/endo) are studied and the chemical shifts of the C-atoms are assigned by application of Eu(fod)₃ paramagnetic shift investigations and additional chemical shift parameters. Thus relatively strong γ-effects up to 12,8 ppm were observed for the C-atoms 4, 5, 7, 9, 10 and 1, 3, dependent on the exo/endo configuration of the OH-groups and the attached 5-ring, giving an interesting insight into the gemetry of these norbornane systems.     

Extensive hydrogen and halogen bonding,and absence of intramolecular hydrogen bonding between alcohol and nitro groups in a series of endo‐nitronorbornanol compounds

The influence of the substituent at the C2 position on the hydrogen‐bonding patterns is compared for a series of five related compounds, namely (±)‐3‐exo,6‐exo‐dibromo‐5‐endo‐hydroxy‐3‐endo‐nitrobicyclo[2.2.1]heptane‐2‐exo‐carbonitrile, C₈H₈Br₂N₂O₃, (II), (±)‐3‐exo,6‐exo‐dibromo‐6‐endo‐nitro‐5‐exo‐phenylbicyclo[2.2.1]heptan‐2‐endo‐ol, C₁₃H₁₃Br₂NO₃, (III), (±)‐methyl 3‐exo,6‐exo‐dibromo‐5‐endo‐hydroxy‐3‐endo‐nitrobicyclo[2.2.1]heptane‐2‐exo‐carboxylate, C₉H₁₁Br₂NO₅, (IV), (±)‐methyl 3‐exo,6‐exo‐dibromo‐7‐diphenylmethylidene‐5‐endo‐hydroxy‐3‐endo‐nitrobicyclo[2.2.1]heptane‐2‐exo‐carboxylate, C₂₂H₁₉Br₂NO₅, (V), and (±)‐methyl 3‐exo,6‐exo‐dibromo‐5‐endo‐hydroxy‐3‐endo‐nitro‐7‐oxabicyclo[2.2.1]heptane‐2‐exo‐carboxylate, C₈H₉Br₂NO₆, (VI). The hydrogen‐bonding motif in all five compounds is a chain, formed by O—H...O hydrogen bonds in (III), (IV), (V) and (VI), and by O—H...N hydrogen bonds in (II). All compounds except (III) contain a number of Br...Br and Br...O halogen bonds that connect the chains to each other to form two‐dimensional sheets or three‐dimensional networks. None of the compounds features intramolecular hydrogen bonding between the alcohol and nitro functional groups, as was found in the related compound (±)‐methyl 3‐exo,6‐exo‐dichloro‐5‐endo‐hydroxy‐3‐endo‐nitrobicyclo[2.2.1]heptane‐2‐exo‐carboxylate, (I) [Boeyens, Denner & Michael (1984b). J. Chem. Soc. Perkin Trans. 2, pp. 767–770]. The crystal structure of (V) exhibits whole‐molecule disorder.     

‘Lone Pair’ and ‘CI Bond’ Ionization Energies of exo- and endo-2-Norbornyl Iodides

A PE-spectroscopic study of exo- and endo-2-norbornyl iodides suggests that the relative ability of the 2-norbornyl group to stabilize an electron deficiency on a substituent X (e.g. I) in exo- or endo-position depends on the location of the positive charge. There is no difference if the positive hole is strongly localized on on the substituent X (e.g. the 5p^?1 state of the title compounds). On the other hand, our results indicate that teh positive hole semi-localized in an exo-C? X bond is better stabilized by the 2-norbornyl group than a semi-localized, positive hole in an endo-C? X bond.     

A novel stereochemical control : A persistent preference for exo electrophile acceptance in 2-bornanes

The conjugate bases of camphor oxime and 2-nitro-bornane, possessing a π array, accept elements of H⁺ and Br⁺ selectively from the “crowded” exo side. The present work adds another facet towards the understanding of stereochemical controls inherent in the bornane framework, the other two related being the endo addition of nucleophiles to camphor and the exo electrophile acceptance by camphor enolates. The present work describes, inter alia, a practical route to 2-endo nitrobornane and the novel 2,2-dinitrobornane.