Complexation properties and characterization of four conformers of a [2.1.2.1]metacyclophane

Cone, partial cone, 1,2-alternate, and 1,4-alternate conformers of tetrakis[(ethoxycarbonyl)-methoxy] [2.1.2.1]metacyclophane (MCP,2) were isolated and characterized by¹H-NMR and an X-ray crystal structure analysis of the 1,4-alternate conformer. Of the four conformers, only the cone conformer2d forms a complex with alkali metals. The stability constants of2d with alkali metal ions were determined by the direct¹H-NMR method and UV spectra, and the order observed as potassium cesium, sodium ions.This paper is dedicated to the commemorative issue on the 50th anniversary of calixarenes.     

Aminolysis of p-tert-butyltetrathiacalix[4]arene tetraethylacetates in cone, partial cone and 1,3-alternate conformation: synthesis of amide based receptors for oxyanions

Cone, partial cone and 1,3-alternate conformers of tetrathiacalix[4]arene tetraethylacetate were synthesized and subjected to aminolysis with alkyl amines [CH₃(CH₂)_nNH₂; n=2, 3, 5] to yield mono-, di-, tri- or tetrasubstituted p-tert-butyltetrathiacalix[4]arene amides which were characterized by detailed analysis of their NMR spectral and single crystal X-ray crystallography. It has been observed that while the 1,3-alternate and cone conformers of the tetrathiacalix[4]arene tetraethylacetate gave corresponding tetrathiacalix[4]arene tetraamides under different experimental conditions, the corresponding partial cone conformer undergoes a cascade of regioselective reactions with the same amines. Variable temperature ¹H NMR experiments allowed the determination of relative stability of different conformers within the temperature range of 298-333 K. The synthesized derivatives were evaluated as molecular extractants for cations and anions and were determined to facilitate extraction of oxyanions (CrO₄²⁻ and Cr₂O₇²⁻) from aqueous to the organic phase. The studies have a significance in the design of tetrathiacalix[n]arene based molecular receptors for innovative applications.     

Molecular fragmentations: Part VII. Structures and energies of mass spectral fragments derived from benzene

Molecular structures and energies have been calculated, using MINDO/3, of the mass spectral ions arising from benzene: (C₆H₆)⁺ (three non-valence isomers); (C₆H₅⁺); (C₅H₃⁺) (four isomers); (C₄H₄)⁺ (three isomers); (C₄H₃)⁺ (two isomers); (C₄H₂)⁺ (four isomers); (C₃H₃)⁺; and (C₂H₂)⁺. Calculations have been made for the conjugate neutral fragments, allowing calculation of appearance potentials, and also for the ion (C₆H₇)⁺.     

Isolation and characterization of nongeminal cyclic methylphenylphosphazene tetramers

Heating pure samples of the cyclic phosphazenes, cis- or trans-[Me(Ph)PN](3), yielded mixtures of the cis and trans isomers of the cyclic phosphazene trimers, [Me(Ph)PN](3), and all four geometric isomers of the tetramers, [Me(Ph)PN](4). Varying the temperature and heating times changes the ratio of these components. Following the thermolysis by NMR spectroscopy indicated that only a mixture of the two isomeric trimers occurred initially. Longer heating times produced mixtures of the isomers of the tetramer. Column chromatography and solubility differences were used to separate each of the isomers of the tetramer. Spectroscopic and X-ray crystallographic studies suggest that the four different geometrical isomers of the tetramer can be described as cone, partial cone, 1,2-alternate, and 1,3-alternate by analogy to calix[4]arene.     

Unique inclusion behaviour of 5,11,17,23-tetra-tert-butyl-25,26,27,28-tetraaminothiacalix[4]-arene towards small organic molecules

Tetraaminothiacalixarene 3, bearing four amino groups instead of the hydroxy groups of p-tert-butylthiacalix[4]arene 2, exhibits inclusion properties different from those of compound 2 towards small organic molecules upon crystallisation from neat solvents or guest solutions. X-ray crystallographic analyses reveal that nitromethane and acetonitrile are included into the cone-shaped cavity of compound 3, as is often seen in inclusion crystals of compound 2, whereas dichloromethane occupies a space between two distal benzene rings of compound 3, adopting a 1,3-alternate conformation. Acetic acid, which forms a dimer, fills a pore surrounded by four host molecules with a pinched cone conformation. Furthermore, guest-free crystals of compound 3 with a 1,3-alternate conformation absorb acetonitrile to give inclusion crystals with the same crystal structure as that obtained by the crystallisation. Thus, compound 3 flexibly changes its conformation according to the structures of guest compounds.     

Synthesis and Cesium Binding Affinity of New 25,27-Bis(alkyloxy)calix[4]arene-crown-6 Conformers in Relation to the Alkyl Pendent Moiety

The preparation of new 25,27-bis(alkyloxy)calix[4]arenes-crown-6 in the cone, partial-cone and 1,3-alternate conformation is reported. We have also investigated the alkylation of the cone monoalkylated calix[4]arene-crown-6 achieved using Cs 2 CO 3 . This reaction afforded a mixture of cone and partial-cone calix[4]arenes-crown-6 having an alkyl chain anti or syn to the polyether ring. Conformations have been probed using 1 H, 13 C, 2D-NMR and NOESY analysis, and using X-ray crystallography. Extraction experiments using a two-phase solvent method involving cesium picrate were performed for these newly synthesized conformers. They reveal and confirm the strong preference for the 1,3-alternate conformers. The affinity of 1,3-alternate calixarenes for Cs + has been assessed by complexation measurements (log g ) using a spectrophotometric technique. No significant Cs + extraction difference was observed in relation to the nature of the alkyl chains on the aromatic rings. 1 H NMR studies of the 1,3-alternate calixarene Cs + complexes confirms the cation's spacial position between the two aromatic rings, due to cation- ~ interactions.     

Synthesis, Conformational Studies and Inclusion Properties of Tetrakis[(2-pyridylmethyl)oxy]thiacalix[4]arenes

An attempted O-alkylation of the flexible macrocycle 1with 2-(chloromethyl)pyridine in the presence of Cs₂CO₃ under THF reflux afforded a mixture of twoconformers of tetra-O-alkylated product 4a in a ratio of 91:9 (cone-4a:1,2-alternate-4a)in 70% yield, while other possible isomers were not observed. In the case of Na₂CO₃, there was no reaction product,only the starting compound 1, whereasonly monoalkylated compound 3 was obtained when usingK₂CO₃ as the base. The distribution of cone conformer decreased in the case of O-alkylation of tetraol 1with 4-(chloromethyl)pyridine or benzyl bromide in the presence of Cs₂CO₃ in comparison with that ofO-alkylation with 2-(chloromethyl)pyridine, while the 1,2-alternate conformer increased in the same sequence. The larger Cs⁺might increase the contribution of the metal template effect, which can hold the 2-pyridylmethyl group(s) and theoxide group(s) on the same side of the tetrathiacalix[4]arene 1 through the cation-O^- and -N-interaction in the caseof O-alkylation of tetraol 1 with 2-(chloromethyl)pyridine.Only when the template metal can hold the 2-pyridyl group(s) andthe oxide group(s) on the same side of the tetrathiacalix[4]arene is the conformation immobilized to thecone. The template effect of the cesium cation plays an important role in this alkylation reaction. The structuralcharacterization of these products is also discussed.The two-phase solvent extraction data indicated thattetrakis[(2-pyridylmethyl)oxy]thiacalix[4]arenes 4a show strong Ag⁺ affinity and a high Ag⁺ selectivity wasobserved for cone-4a. A good Job plot proves 1:1 coordination of cone-4a with Ag⁺ cation.¹H-NMR titration of cone-4a with AgSO₃CF₃ also clearly demonstrates that a 1:1complex is formed with retention of the original symmetry. In contrast, the 1,2-alternate-4a can form a 2:1 metal/thiacalix[4]arene complex and the two metal-binding sites display positive allostericity. The conformational changes ofpyridine moiety from the original outward orientation of the ring nitrogen to the inside orientation toward thethiacalixarene cavity were observed in the processof Ag⁺ complexation.     

New oxacalix[4]arene carboxylate detects viologen in protic media

ABSTRACT

We demonstrate that Ullman fragment-coupling can be used to synthesise an oxacalix[4]arene monocarboxylic acid, which provides easy access to its water-soluble carboxylato derivatives. Crystallographic and computational data suggest that the new carboxyl-substituted oxacalix[4]arene adopts a 1,3-alternate conformation both in the solid-state and in methanol solution. Its water-soluble tetrabutylammonium derivate can detect the herbicide paraquat at neutral pH in aqueous media (K _a = 111 ± 3 M^–1) and in methanol (K _a = 2020 ± 70 M^–1).     

A facile one-pot access to cone and 1,3-alternate conformers of calix[4]arene-bis(amido)crowns

A facile one-pot access to cone and 1,3-alternate calix[4]arene-bis(amido)crowns by the use of sodium hydride or cesium carbonate as template/base has been reported. The structures of products have been established through detailed chemical, physical, and spectroscopic data and single crystal X-ray analysis of calix[4]arene-bis-(ethyleneamido)crown, 7a. The preliminary evaluation of the obtained molecular receptors promise opportunities to design molecular capsules/carriers for toxic metal ions (i.e., Hg⁺⁺) and anionic species (CrO₄⁻⁻).     

1,3-Alternate and C-1,2-Alternate Tetrahomodioxacalix[4]crowns. Crystal Structures and Metal Ion Complexation

Two novel tetrahomodioxacalix[4]crowns with crown-5 and crown-6 rings weresynthesized. From X-ray crystal structures, homooxacalix[4]crown-5 (3) andhomooxacalix[4]crown-6 (2) were found to be in the 1,3-alternate and theC-1,2-alternate conformations, respectively. Homooxacalix[4]crown-5 (1)shows a marked selectivity for cesium ion over other metal ions tested.     

Stable radical adducts of diisopropylphosphoryl radicals with [σ-C60OO—Ir(o-HCB10H9CCH2PPh2-B,P)(ButNC)2]

As shown by ESR measurements, the irradiation of benzene solutions containing the complex [σ-C₆₀OO—Ir(o-HCB₁₀H₉CCH₂PPh₂-B, P)(Bu^tNC₂)] (2) and Hg[P(O)(OPrⁱ)₂]₂ (3) with light at λ = 366 nm affords eight stable isomers. Stability of the isomers is attributed to the addition of diisopropylphosphoryl radicals to the carbon atoms of the cis-1 and cis-2 bonds in complex 2.     

Geometric Isomers of Cobalt(II) and Cobalt(III) Picolinates in Solution

Cobalt complexes with picolinic acid (HPic), namely, [Co^II(Pic)₂(H₂O)₂] · 2H₂O (I) and [Co^III(Pic)₃] · H₂O (II) are studied using ¹H and ¹³C NMR spectroscopy. Compound Iexists in solution as three geometric isomers, namely, trans-trans-trans, cis-trans-cis, and trans-cis-cis(molar ratio 4 : 2 : 1, respectively). According to ¹³C NMR data, compound IIexists in solution as a mer-isomer. The relative energy stability of the isomers was estimated using the molecular mechanics method.     

The ESR study of the influence of fluorinated alcohols on spin-adducts of phosphoryl radicals with C60 and C70: a change of magnetic resonance parameters and exclusive formation of monoadducts

Complex formation of^.C₆₀P(O)(OPrⁱ)₂ or three isomers of^.C₇₀P(O)(OPrⁱ)₂ with fluorinated alcohols CF₃CH₂OH (1), (CF₃)₃COH (2), and (CF₃)₂CHOH (3) results in an increase in the hyperfine splitting constants with the³¹P nucleus by approximately 3–4 G. Only monoadducts are formed when alcohols1–3 are added to toluene saturated solutions of Hg[P(O)(OPrⁱ)₂]₂ and C₆₀ under photochemical conditions of multi-addition of phosphoryl radicals to C₆₀. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1869–1871, September, 1998.     

Synthesis,characterization and DNA-intercalation studies of two ferrocene-based Fe-Sn heterobimetallic compounds,and crystal structure of trimethyltin (p-ferrocenyl)benzoate

In this article, we report the synthesis of two (A3 and A4) new ferrocene-based heterobimetallic compounds of Fe and Sn. Both compounds are structural isomers with formula (C₅H₅)Fe(C₅H₄C₆H₄COO)Sn(CH₃)₃ and have been characterized by elemental analysis, cyclic voltammetry, FTIR, UV–Vis and NMR spectroscopy. Additionally, the structure of A3 was confirmed by single-crystal XRD studies. XRD studies confirmed that in the solid phase A3 exists as a unidirectional polymeric material. DNA-binding potential of these compounds was evaluated by UV–Vis spectroscopy, cyclic voltammetry, and viscosity measurements. These interaction assays conclude that A3 (binding constant ~10⁴ M^?1) and A4 have good attraction toward DNA and bind with DNA in intercalative manner.     

Synthesis,structure and isomerism of “three-bridge” exo-nido-osmacarborane clusters

The reaction of OsCl₂(PPh₃)₃ with [nido-7-R¹-8-R²-C₂B₉H₁₀]K⁺ produced a series of new exo-nido-osmacarborane complexes exo-nido-5,6,10-[Cl(Ph₃P)₂Os]-5,6,10-(-H)₃-10-H-7-R¹-8-R²-7,8-C₂B₉H₆ (1: R¹ = R² = H; 2: R¹ = R² = Me; 3: R¹ = R² = PhCH₂; 4: R¹ + R² = 1,2-C₆H₄(CH₂)₂; 5: R¹ = H, R² = Me) in which the osmium-containing group is linked to the nido-carborane ligand through three two-electron three-center bonds. Compounds 1—5 are formed as mixtures of symmetric (a) and asymmetric (b) isomers; pure symmetric isomers 2a and 4a were isolated by fractional crystallization, and the mixture of isomers 3a, was quantitatively separated into individual compounds 3a and 3b by column chromatography on silica gel. Detailed analysis of the ³¹P{¹H}, ¹H, ¹¹B NMR spectra of 1a,b—5a,b and 2D ¹H-¹H{¹¹B} and ¹¹B{¹H}-¹¹B{¹H} NMR spectra of 3a and 3b was performed. The structures of isomers 2a and 4a were confirmed by an X-ray diffraction study. According to the NMR and X-ray diffraction data, the isomerism of exo-nido-complexes 1a,b—5a,b is actually the cis—trans-isomerism of ligand arrangement in the octahedral coordination of the Os atom.     

Kinetic Studies of the Thermal cis-to-trans Isomerization of Dioxaphospholanes

By following a previously reported method,¹ the synthesis of r-2-alkoxy-cis-4-cis-5-dimethyl-1,3,2-λ³-dioxaphospholanes ligands (1 and 3) was carried out. The purpose of this work is the kinetic study of the inversion barrier at phosphorus for 1 and 3 and the comparison with the already informed dioxaphospholane 2. The kinetic measurements of the thermal isomerization cis-to-trans were performed by ³¹P NMR spectroscopy, observing a first order kinetics for both compounds. The energy of activation (E_a) for the epimerization of compounds cis-1 and cis-3 was calculated to be 16.0 ± 0.6 and 11.8 ± 0.8 kcal/mol, respectively. The values of the thermodynamic parameters of the transition state (Δ H^≠, Δ S^≠, Δ G^≠) suggest that the inversion at phosphorus not only depends on the spatial requirements of the alkoxy substituent but also on entropic effects. The thermodynamic parameters Δ H°, Δ S°, and Δ G° were also evaluated and they show that the cis isomers are preferred from enthalpic point of view, but entropic effects dominate the equilibrium trans ? cis leading to the entropically favored trans isomers. Furthermore, the results are supported by density functional theory calculations of 1–4 at the B3LYP/6-31G** level.     

Effect of conformation on metal ion extraction by calix[4]arene dicarboxylic acids

Synthetic routes to four calix[4]arene stereoisomers with two distal methoxycarboxy groups and two distal butoxy groups are reported. Conformations of cone, partial cone (butyl up), partial cone (acid up), and 1,3-alternate were established by ¹H and ¹³C-NMR spectroscopy. To probe the influence of ligand conformation on metal ion complexation, extractions from aqueous solutions into 1,2-dichloroethane were performed. These included competitive alkali metal cation extractions, competitive alkaline earth metal cation extractions, and single species extractions of Pb²⁺ and of Hg²⁺. Comparisons are also made with the results for a conformationally mobile analogue in which the two butoxy groups are replaced with methoxy groups.     

Calculations of thermodynamic stability of CpCoC<Subscript>2</Subscript>B<Subscript>9</Subscript>H<Subscript>11</Subscript> cobaltacarborane isomers

Quantum-chemical calculations of the geometry and energies of nine possible isomers of 12-vertex cobaltacarborane CpCoC₂B₉H₁₁ (1) were carried out by the DFT method (PBEPBE/DGDZVP/DGA1). Thermodynamic stability of the isomers increases with increasing distance between the carbon atoms in the cage and is virtually independent of the position of the CpCo vertex. The relative stabilities of the 1,2,3-(17.57 kcal mol⁻¹), 1,2,4-(3.72 kcal mol⁻¹), and 1,2,9-isomers of 1 (0 kcal mol⁻¹) are similar to the corresponding values for the ortho (17.61 kcal mol⁻¹), meta (3.21 kcal mol⁻¹), and para isomers (0 kcal mol⁻¹) of carborane C₂B₁₀H₁₂. The results of the present study confirm a close similarity of the CpCo and BH fragments in metallacarborane chemistry. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1557–1559, July, 2005.     

[1.1]meta-Stilbenophanes as calixarene analogs: preparation, crystal structure, and cis-trans photoisomerization

Three isomers of [1.1]meta-stilbenophane were synthesized by the McMurry reaction of diarylmethane dialdehyde and their crystal structures and photochemical properties were investigated. X-ray crystallographic analyses of these isomers revealed that they were assigned to a trans-trans (t-t) form with a 1,3-alternate conformation, a cis-trans (c-t) form with a distorted-cone conformation, and a cis-cis (c-c) form with a 1,2-alternate conformation. A ¹H NMR study indicated that a t-t isomer could be completely transformed into a 35:65 mixture of c-t and c-c isomers by photoirradiation at 254 nm.     

Complexation and DFT studies of lanthanide ions by (2-pyridylmethoxy)homooxacalixarene derivatives

The binding of lanthanide cations by 2-pyridylmethoxy derivatives of p-tert-butyldihomooxacalix[4]arene (1b), in the cone conformation, and p-tert-butylhexahomotrioxacalix[3]arene (2b), in both cone and partial cone conformations, was studied. These properties were assessed by extraction studies of the metal picrates from water into dichloromethane and stability constant measurements in methanol and acetonitrile, using spectrophotometric and microcalorimetric techniques. Proton NMR titrations with La³⁺ and Yb³⁺ cations were done in order to get information on the binding sites. Computational methods (density functional theory (DFT) calculations) were also used to complement the NMR data. The p-tert-butylcalix[4]arene analogue (3b) was also studied, and the results of the four ligands were compared. Partial cone-2b is the best extractant for lanthanide ions, showing some preference for the heavy lanthanides. In complexation, all four ligands show the same trend and a high selectivity for Yb³⁺ (ML, log β ≥ 7). Besides the formation of ML complexes, ML₂ species were also obtained. In most cases, these species were corroborated by the proton NMR studies. For partial cone-2b with Pr³⁺ the complexation process is enthalpically driven, whereas for 3b the formation of the ML₂ species with this cation is due to a favourable entropy term. DFT studies indicate that ligand 3b forms the most stable complex with La³⁺, followed by partial cone-2b.