Cucurbit[5]uril, Decamethylcucurbit[5]uril and Cucurbit[6]uril. Synthesis, Solubility and Amine Complex Formation

A simple way to prepare cucurbit[5]uril is described. The macrocycles of the cucurbituril type are nearly insoluble in water. The solubilities of cucurbit[5]uril, decamethylcucurbit[5]uril and cucurbit[6]uril in hydrochloric acid, formic acid and acetic acid of different concentrations have been investigated. Due to the formation of complexes between cucurbit[n]urils and protons the solubility increases in aqueous acids. The macrocyclic ligands are able to form complexes with several organic compounds. Thus, the complex formation of the cucurbituril macrocycles with different amines has beenstudied by means of calorimetric titrations. The reaction enthalpy gives noevidence of the formation of inclusion or exclusion complexes. ¹H-NMR measurements show that in the case of cucurbit[5]uril and cucurbit[6]uril the organic guest compound is included within the hydrophobic cavity. Decamethylcucurbit[5]uril forms only exclusion complexes with organicamines. This was confirmed by the crystal structure of the decamethylcucurbit[5]uril-1,6-diaminohexane complex.     

Synthesis and crystal structure of a supramolecular adduct of trinuclear molybdenum oxocluster with macrocyclic cavitand cucurbit[5]uril containing the included ionic associate Na<Superscript>+</Superscript>...Cl...Na<Superscript>+</Superscript>

The compound of composition [{Mo₃O₄(H₂O)₆Cl₃}₂(Na₂Cl⊂ C₃₀H₃₀N ₂₀O₁₀)]Cl₃⋅14H₂O (1) was prepared by evaporation of a hydrochloric acid solution containing NaCl, the trinuclear aqua complex [Mo₃O₄(H₂O)₉]⁴⁺, and the macrocyclic cavitand cucurbit[5]uril (C₃₀H₃₀N₂₀O₁₀). X-ray diffraction analysis demonstrated that the cucurbit[5]uril molecule is closed on both sides by the cluster cations through hydrogen bonding between the CO groups of the cucurbit[5]uril portals and the aqua ligands of the oxo cluster. The inner cavity of the supramolecular adduct includes an unusual ionic associate Na⁺...Cl...Na⁺. The sodium cations are coordinated by five carbonyl oxygen atoms of each portal of the macrocycle. Compound 1 is the first structurally characterized complex, in which the macrocyclic cucurbit[5]uril ligand is directly coordinated to the alkali metal cation. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1513–1517, July, 2005.     

瓜环与哌嗪衍生物主客体配合物的研究(英)

本文采用核磁共振技术研究瓜环与哌嗪衍生物主客体配合物的结构特征。¹H核磁共振谱证实八元瓜环能与一些哌嗪衍生物形成稳定的双客体主客体配合物,六元瓜环与一些哌嗪衍生物形成稳定的1∶1主客体配合物。而五、七元瓜环和哌嗪衍生物则未表现出明显地相互作用。形成的自组装主客体配合物得到质谱的进一步证实。     

Comparative macrocycle binding of the anticancer drug phenanthriplatin by cucurbit[<Emphasis Type="Italic">n</Emphasis>]urils, β-cyclodextrin and <Emphasis Type="Italic">para</Emphasis>-sulfonatocalix[4]arene: a <Superscript>1</Superscript>H NMR and molecular modelling study

The potential anticancer drug phenanthriplatin, [cis-(NH₃)₂(phenanthridine)Cl]⁺, forms supramolecular complexes with cucurbit[n]urils (CB[n], n?=?7 or 8), β-cyclodextrin and para-sulfonatocalix[4]arene (sCX[4]) as determined by ¹H NMR spectroscopy and molecular modeling. The results show that cucurbit[7]uril binds over the long arm of the drug, where hydrophobic effects and two hydrogen bonds stabilise binding. For cucurbit[8]uril, two phenanthriplatin molecules can bind simultaneously within the macrocycle’s cavity. Unfortunately, Na⁺ was able to displace the drug from both CB[7] and CB[8] making the macrocycles unsuitable as delivery vehicles for phenanthriplatin. Drug binding to β-cyclodextrin occurs at the portal of the macrocycle with no part of the phenanthriplatin located within the cavity. Phenanthriplatin binding to sCX[4] occurs in a 2-to-1, macrocycle-to-drug, ratio with the formation of a capsule-like complex where each sCX[4] binds over opposing ends of the drug. The results indicate that para-sulfonatocalix[4]arene is the only suitable macrocycle of the four studied for further research into phenanthriplatin drug delivery.     

六～八元瓜环与三种N-苄基取代笼状客体的相互作用

合成了3种具有对不同瓜环选择性各异的双探针N-苄基取代笼状客体, 它们分别是N-苄基六次甲基四胺盐酸盐(1), N-苄基喹啉环啶盐酸盐(2), N-苄基-1,4-二氮杂双环[2.2.1]辛烷盐酸盐(3), 利用¹H NMR和MS等方法对这些客体进行了表征. ¹H NMR显示, 六元瓜环仅对这些客体的苄基探针部分具有选择性作用, 形成作用比为1∶1的不对称包结配合物; 七元瓜环对客体1和3的苄基探针部分具有选择性作用, 形成作用比为1∶1的不对称包结配合物, 而对客体2的笼状奎宁环啶基部分具有选择性作用, 也形成作用比为1∶1的包结配合物; 八元瓜环也仅对这些客体的苄基探针部分具有选择性作用, 形成作用比为1∶2的对称包结配合物.     

七、八元瓜环与二溴化1,n-亚烷基-二-2-甲基吡啶的超分子自组装

合成和表征了4个碳链长度不同二溴化1,n-亚烷基-二-2-甲基吡啶(客体,n=6,8,10,12),利用1H NMR技术、热重分析及紫外吸收光谱法考察了这些客体与七、八元瓜环(主体)的相互作用,以及形成的主客体包结物的结构特征.研究结果表明4个客体与七、八元瓜环形成不同的主客体包合物.七元瓜环可穿梭在线性客体分子上形成类轮烷型或哑铃型主客体包合物;而由于具有较大的空腔,八元瓜环可包容弯曲状的整个客体分子.     

Cucurbit[n]uril formation proceeds by step-growth cyclo-oligomerization

In contrast to the high yield formation of cucurbit[n]uril (CB[n]) from a 1:2 ratio of glycoluril to formaldehyde, the condensation of glycoluril with less than 2 equiv of formaldehyde delivers a reaction mixture that contains glycoluril oligomers (2-6) and CB[n] compounds that lack one or more methylene bridges known as nor-seco-cucurbit[n]urils (ns-CB[n]). In this paper we report the chromatographic purification of C-shaped glycoluril oligomers (dimer-hexamer), their characterization in solution, and their X-ray crystal structures. Quite interestingly, despite being acyclic glycoluril pentamer 5 and hexamer 6 retain the ability to bind to guests typical of CB[6] but are also able to expand their cavity to accommodate larger guests like cationic adamantane derivatives. We performed product resubmission experiments with glycoluril oligomers 2-6 and found preferences for the formation of specific ring sizes during CB[n] formation. A comprehensive mechanistic scheme is proposed that accounts for the observed formation of 2-6 and ns-CB[n]. Overall, the experiments establish that a step-growth cyclo-oligomerization process operates during CB[n] formation.     

Investigation of Host–Guest Compounds of Cucurbit[n=5–8]uril with Some Ortho Aminopyridines and Bispyridine

Host–guest complexes of cucurbit[n=5–8]uril and some examples of ortho substituted pyridines or aminopyridines were examined by ¹H NMR spectroscopy. Portal binding of two ortho aminopyridine free bases, by cucurbit[5]uril, was observed in ¹H NMR spectra. Combined cavity and portal binding in cucurbit[6]uril were observed for both the free base 2-aminomethylpyridine, ampy, the HCl salt, ampy·1HCl, and the salt of 2,2′-bispyridine, bpy·1HCl. Two novel complexes were formed with cucurbit[6]uril. The free base ampyas a dual occupant, formed a 2:1 complex, and bpy·1HCl formed a stable asymmetric 1:1 complex. Only portal binding of 2,6-bisaminomethylpyridine and its salts was observed for cucurbit[6]uril. Fast exchange of the free base and pyridineammonium salts was observed for cucurbit[7-8]uril.This revised version was published online in July 2005 with a corrected issue number.     

The formation of homogeneous and heterogeneous 2:1 complexes between dialkyl- and diarylammonium ions and α-cyclodextrin and cucurbit[6]uril in aqueous formic acid

Dialkyl- and diarylammonium ions are able to form complexes with α-cyclodextrin and cucurbit[6]uril. These amines are able to complex two guest molecules simultaneously resulting in the formation of homogeneous or heterogeneous 1:2 (ratio of dialkylammonium to ligand) complexes. The stability constants and reaction enthalpies for the formation of 1:1 complexes have been measured using potentiometric and calorimetric titrations. Differences between the values obtained by these methods can be attributed to solvent composition. Only for the 1:2 complex formation with cucurbit[6]uril, the ligands influenced each other. The polar carbonyl groups at each portal of the cucurbit[6]urils interacted simultaneously with the protonated amino group resulting in an electrostatic repulsion between both molecules. No further interactions between two complexed molecules of α-cyclodextrin or cucurbit[6]uril and α-cyclodextrin were observed. The absence of polar groups in the case of α-cyclodextrin led to unaffected formation of homogeneous and even heterogeneous 1:2 complexes.     

Anion encapsulation by Ln(III)/K(I) heterobismetal-capped cucurbit[5]uril

Three Ln(III)/K(I) (Ln = La, Ce and Nd) heterobismetal-capped cucurbit[5]uril molecular capsules, {[LaK(C₃₀H₃₀N₂₀O₁₀)Cl]Cl(H₂O)₃}Cl₂·8H₂O (1), {[CeK(C₃₀H₃₀N₂₀O₁₀)Cl]Cl(H₂O)₃}Cl₄(H₃O)₂ ^2 + ·8H₂O (2) and {[NdK(C₃₀H₃₀N₂₀O₁₀)Cl]Cl(H₂O)₃}Cl₂·12.5H₂O (3), were synthesised by self-assembly in aqueous solution, and their anion encapsulation property was confirmed by X-ray crystallography. The effect of the lanthanide cation radius on the structure of the heterobismetal-capped cucurbit[5]uril molecular capsules has been investigated.     

Synthesis and crystal structure of [Na2(μ-H2O)(H2O)CB[5]]Cl2 · 6H2O, [Na3(μ-H2O)4(H2O)4(CNPy@CB[6])]Cl3 · 8H2O, and [Rb2(μ-H2O)2(CNPy@CB[6])]Cl · 8H2O

The chain coordination polymers [Na₂(μ-H₂O)(H₂O)CB[5]]Cl₂ · 6H₂O (I), [Na₃(μ-H₂O)₄(H₂O)₄(CNPy@CB[6])]Cl₃ · 8H₂O (II), and [Rb₂(μ-H₂O)₂(CNPy@CB[6])]Cl₂ · 8H₂O (III) were prepared by heating (110°C) of a mixture of sodium or rubidium chloride, cucurbit[n]uril (CB[n], where n = 5, 6), 4-cyanopyridine, and water. According to X-ray diffraction data, binding of polynuclear cations with CB[n] in I–III occurs through coordination of the oxygen atoms of the cucurbit[n]uril portals to alkali metal atoms. Complexes I–III of the above composition isolated to the solid phase as supramolecular compounds with CB[n] were structurally characterized for the first time.     

H3BTC‐Induced Supramolecular Assembly Based on Cucurbit[6]uril: Possible Application for Sensing Small Molecules

The compound 2[Ca(H₂O)₃ (DMF@CB[6])] · 2(BTC) · 15H₂O ( CCUT ‐ 102 , CB[6] = cucurbit[6]uril; H₃BTC = 1,3,5‐benzenetricarboxylic acid) was synthesized using the approach of organic guest‐induced formation of polymers or frameworks based on the coordination of metal ions and cucurbit[n]urils. The compound was characterized by X‐ray diffraction analysis, PXRD, IR spectroscopy, thermogravimetric and elemental analyses. According to the X‐ray diffraction data, the calcium atom is coordinated by the oxygen atoms of the CB[6] molecule, water molecules, and N ,N‐dimethylformamide (DMF). The internal cavity of CB[6] is occupied by DMF. Each H₃BTC molecule interacts the CB[6] molecules through π?π interactions between aromatic rings of H₃BTC and the rings of CB[6]. The luminescence behaviors and sensing properties of CCUT ‐ 102 in different solvents were also studied.     

六～八元瓜环与咪唑[4,5-f]-1',10'-菲咯啉衍生物的相互作用

合成了2-苯基-咪唑[4,5-f]-1',10'-菲咯啉和对二甲氨基-2-苯基-咪唑[4,5-f]-1',10'-菲咯啉两种咪唑[4,5-f]-1',10'-菲咯啉衍生物, 并经过一、二维核磁共振谱以及质谱方法的验证. 利用¹H NMR、质谱以及紫外可见分光光度法, 考察了以六～八元瓜环为主体, 咪唑[4,5-f]-1',10'-菲咯啉衍生物为客体的作用体系, 以及形成的主客体包结配合物的结构特征. 研究结果表明: 三种瓜环均与2-苯基-咪唑[4,5-f]-1',10'-菲咯啉发生相互作用, 客体以较小的苯基一端穿过瓜环内腔直至苯基部分和菲咯啉部分分别露置在瓜环的两个端口外, 特别是八元瓜环能容纳两个客体分子. 而对二甲氨基-2-苯基-咪唑[4,5-f]-1',10'-菲咯啉仅能与七及八元瓜环相互作用, 作用模式与前者相同.     

八元瓜环与抗癌药物甲氨蝶呤的超分子相互作用

利用紫外吸收光谱法考察了八元瓜环(Q[8])与抗癌药物甲氨蝶呤(MTX)的相互作用;同时研究了甲氨蝶呤的不同质子化形式及体系温度对相互作用的影响;计算了相应的稳定常数及热力学参数等.实验结果表明,Q[8]与MTX作用比为1∶1,包结平衡常数为(7.64±1.52)×104 L/mol;龄前热力学参数测定结果表明,上述主...     

瓜环与4,4'-二氨基二苯甲烷衍生物的相互作用

合成了三种长链多芳环多胺基客体, 它们分别由三种醛基吡啶异构体与4,4'-二氨基二苯甲烷形成的Schiff碱还原而成, 并得到¹H NMR以及质谱分析方法表征证实. 以核磁共振技术、紫外吸收光谱分析方法以及滴定¹H NMR方法为研究手段, 对瓜环(cucurbit[n]urils, n＝6～8)分别与三种4,4'-二[N-(吡啶甲基)氨基]二苯甲烷盐酸盐相互作用进行了考察. 实验结果表明, 六元瓜环与三种4,4'-二[N-(吡啶甲基)氨基]二苯甲烷盐酸盐相互作用均形成物质的量之比为2∶1的哑铃型包结配合物; 八元瓜环与三种N,N'-二(N-(吡啶甲基)二苯甲烷盐酸盐相互作用形成以类轮烷结构为主的包结配合物; 七元瓜环与三种N,N'-二(N-(吡啶甲基)二苯甲烷盐酸盐相互作用存在多种模式的竞争.     

Synthesis and crystal structure of (H3O)2{(Na2(OH)CB[5])2[HV4O12]}Cl · 14H2O

The compound (H₃O)₂{(Na₂(OH)CB[5])₂[HV₄O₁₂]}Cl · 14H₂O is synthesized by heating (120°C) of a mixture of sodium vanadate, cucurbit[5]uril (CB[5]), rubidium chloride, and water in a sealed ampule. According to the X-ray diffraction data, the binding of the [Na₂(OH)]⁺ binuclear cation with CB[5] occurs due to the bidentate coordination of the oxygen atoms of the portals of cucurbit[5]uril to the sodium atoms. The tetranuclear vanadium complex [HV₄O₁₂]^3? serves as a bridge, joining infinite chains {Na₂(OH)CB[5]} _∞ ⁺ in pairs.     

A novel two-dimensional polyrotaxane network self-assembled by heterowheel [4]pseudorotaxane

A novel heterowheel pseudorotaxane comprised of one guest, one cucurbit[7]uril and two cucurbit[6]urils was synthesised and characterised by ¹H NMR, single crystal X-ray diffraction analysis and thermogravimetric analysis. Single crystal X-ray diffraction analysis demonstrates that the heterowheel pseudorotaxane self-assembles into two-dimensional polyrotaxane network with the aid of water molecules and hydrogen bonds. Every four heterowheel pseudorotaxanes self-assemble into a parallelogram, which is the basic unit of the 2D network.     

Synthesis and Crystal Structure of Macrocyclic Cavitand Cucurbit[5]uril and Its Supramolecular Adduct with Cu（Ⅱ）

The first supramolecular adduct (H₃O)₂[Cu(H₂O)₄](SO₄)₂·2(C₃₀H₃₀N₂₀O₁₀)·₂₄(H₂O) based on cucurbit[5]uril was synthesized and characterized by single crystal X‐ray diffraction analysis. In the adduct, copper ion is coordinated by four oxygen atoms from H₂O. The latter links two cucurbit[5]uril molecules due to a complicated hydrogen bonding containing lattice water molecules.     

Supramolecular assemblies based on some new methyl-substituted cucurbit[5]urils through hydrogen bonding

Three supramolecular assemblies based on three new partial methyl-substituted cucurbit[5]urils, which are tetramethylcucurbit[5]uril (α,γ-TMeQ[5]), hexamethyl cucurbit[5]uril (α,β,δ-HMeQ[5]), Nonamethylcucurbit[5]uril (NMeQ[5]), were synthesized and structurally characterized by single-crystal X-ray diffractions. For the comparison with these new Q[5]s, crystal structure of an assembly constructing with normal Q[5] and K₂PtCl₆ was also reported. They are (α,γ-TMeQ[5])·15(H₂O) (1), (α,β,δ-HMeQ[5])·2Cl⁻·2(H₃O)⁺·7(H₂O) (2), (NMeQ[5])·14(H₂O) (3), (4). In the corresponding crystal structures, the molecular encapsulates included a water molecule and lidded water molecules at both of the portals were observed. Moreover, these molecular encapsulates are connected through hydrogen bonding and formed supramolecular chains or joined in pair.     

Controlling factors in the synthesis of cucurbituril and its homologues.

The acid-catalyzed synthesis of cucurbit[n]urils from formaldehyde and glycoluril is poorly understood. In this paper, we examine a wide range of reaction conditions that include the effects of acid type, acid concentration, reactant concentrations, and temperature to both probe the mechanism and optimize the yields of isolated cucurbit[n]urils, where n = 5-10. A mechanism for the formation of these cucurbit[n]urils is presented. Individual cucurbit[n]urils were unambiguously identified in reaction mixtures using ESMS and (13)C NMR.