Quantitative prediction of biodegradability,metabolite distribution and toxicity of stable metabolites

An evaluation of the capability of organic chemicals to mineralize is an important factor to consider when assessing their fate in the environment. Microbial degradation can convert a toxic chemical into an innocuous one, and vice versa, or alter the toxicity of a chemical. Moreover, primary biodegradation can convert chemicals into stable products that can be difficult to mineralize. In this paper, we present some new results obtained on the basis of a recently developed probabilistic approach to modeling biodegradation based on microbial transformation pathways. The metabolic transformations and their hierarchy were calibrated by making use of the ready biodegradability data from the MITI-I test and expert knowledge for the most probable transformation pathways. A model was developed and integrated into an expert software system named CATABOL that is able to predict the probability of biodegradation of organic chemicals directly from their structure. CATABOL simulates the effects of microbial enzyme systems, generates the most plausible transformation pathways, and quantitatively predicts the persistence and toxicity of the biodegradation products. A subset of 300 organic chemicals were selected from Canada's Domestic Substances List and subjected to CATABOL to compare predicted properties of the parent chemicals with their respective first stable metabolite. The results show that most of the stable metabolites have a lower acute toxicity to fish and a lower bioaccumulation potential compared to the parent chemicals. In contrast, the metabolites appear to be generally more estrogenic than the parent chemicals.     

Probabilistic assessment of biodegradability based on metabolic pathways: CATABOL System

A novel mechanistic modeling approach has been developed that assesses chemical biodegradability in a quantitative manner. It is an expert system predicting biotransformation pathway working together with a probabilistic model that calculates probabilities of the individual transformations. The expert system contains a library of hierarchically ordered individual transformations and matching substructure engine. The hierarchy in the expert system was set according to the descending order of the individual transformation probabilities. The integrated principal catabolic steps are derived from set of metabolic pathways predicted for each chemical from the training set and encompass more than one real biodegradation step to improve the speed of predictions. In the current work, we modeled O 2 yield during OECD 302 C (MITI I) test. MITI-I database of 532 chemicals was used as a training set. To make biodegradability predictions, the model only needs structure of a chemical. The output is given as percentage of theoretical biological oxygen demand (BOD). The model allows for identifying potentially persistent catabolic intermediates and their molar amounts. The data in the training set agreed well with the calculated BODs ( r 2 =0.90) in the entire range i.e. a good fit was observed for readily, intermediate and difficult to degrade chemicals. After introducing 60% ThOD as a cut off value the model predicted correctly 98% ready biodegradable structures and 96% not ready biodegradable structures. Crossvalidation by four times leaving 25% of data resulted in Q 2 =0.88 between observed and predicted values. Presented approach and obtained results were used to develop computer software for biodegradability prediction CATABOL.     

Compound and metabolite distribution measured by MALDI mass spectrometric imaging in whole-body tissue sections

The determination of the compound distribution in laboratory animal tissue in early development is a standard process in pharmaceutical research. While this information is traditionally obtained by means of whole-body autoradiography using radiolabeled compounds, this technology does not distinguish between metabolites and parent compound. The technique described in this article, termed matrix-assisted laser desorption/ionization (MALDI) mass spectrometric imaging, can fill this gap by simultaneously measuring compound and multiple metabolites distributed in whole-body tissue sections, using non-labeled compounds.     

Tailored crystallization behavior,thermal stability,and biodegradability of poly(ethylene adipate): Effects of a biocompatible diamide nucleating agent

An eco-friendly linear organic diamide derivative (EBH) acting as a nucleating agent (NA) was incorporated into the biodegradable poly(ethylene adipate) (PEA) polyester to prepare a kind of new biocompatible composite. The differential scanning calorimetry (DSC) measurement of PEA showed that crystallization temperature (T_c) and crystallization rate increased significantly and crystallization time (t) reduced markedly upon incorporation of EBH. The hydrogen bond interaction existed between PEA and EBH, resulting in the uniform dispersion of EBH in the PEA matrix. In the in situ FTIR test, PEA showed a higher crystallization rate during isothermal crystallization in the presence of EBH. The adjustment rate of the PEA –CO group in the presence of EBH was lower than that of the –C-O-C and –CH₂ groups, also caused by the hydrogen bond interaction between PEA and EBH. In the TG analysis, EBH enhanced the thermal degradation temperature of PEA. Enzymatic degradation of PEA slowed down upon incorporation of EBH. Mechanisms on the nucleation, increased thermal stability, and decreased enzymatic degradation rate of PEA in the presence of EBH have also been proposed and discussed.     

Studies on biodegradability of copolymers of lactic acid, terephthalic acid and ethylene glycol

The copolymers were synthesized by the condensation of lactic acid, terephthalic acid and ethylene glycol. Synthesized copolymers were characterized for various properties such as acid value, hydroxyl value and number average molecular weight, etc. The copolymers were analyzed by FTIR. Copolymers were biodegraded by different fungal species such as Aspergillus sp., Mucor sp., Alternaria sp. and Rhizopus sp., etc. The extent of biodegradation was examined by weight loss and scanning electron microscopy. Biodegradation of copolymer with greater amount of lactic acid was faster than the biodegradation of copolymer with lesser amount of lactic acid.     

Carbodiimide additive to control hydrolytic stability and biodegradability of PLA

Enhanced durability of bio-based polylactic acid (PLA) is one of the prerequisites to be a considered as alternative to petroleum-based polymers in long time application. The effect of bis(2,6-diisopropylphenyl)carbodiimide (BDICDI) additive in various concentration on the extent of hydrolytic stabilization and subsequent degradation kinetics of PLA was studied in the process of abiotic hydrolysis and microbial decomposition under composting conditions. The study showed that BDICDI acts as an efficient stabilizer suppressing the hydrolytic scission of ester bonds of PLA in both degradation processes tested, especially at concentrations above 1.5% w/w. Within the stabilization period which strongly depends on concentrations of BDICDI, suppression of hydrolytic degradation also triggered preservation of thermal and mechanical properties. After the period of stabilization as the dose of stabilizer is depleted, probably via reaction with water molecules and carboxylic groups, the material was hydrolyzed at a comparable or even slightly higher rate than pure PLA. By applying the appropriate amount of BDICDI, the approximate duration of stabilization could be set to suit the desired requirements of the final product.     

Properties of crosslinked polylactides (PLLA & PDLA) by radiation and its biodegradability

Crosslinked materials derived from poly(lactide) (PLA) have been produced by radiation modification in the presence of a suitable crosslinker (triallyl isocyanurate) (TAIC). The crosslinking structure introduced in PLA films has not only much improved the heat stability but also their mechanical properties. The properties of crosslinked samples are governed by crosslinking density and these improvement seemed to increase with radiation dose. This implied that the three dimensional networks have been introduced in material by radiation and the crosslinking density depended on the structure and length of PLA chains. Biodegradability of PLA was also determined by an enzymatic degradation test and burying in compost at 55 °C. Differing with PLLA, PDLA was insignificantly degraded by proteinase K. The degradation rate of PLA in compost was postponed with the introduction of crosslinks.     

External validation of the biodegradability prediction model CATABOL using data sets of existing and new chemicals under the Japanese Chemical Substances Control Law

External validation of the biodegradability prediction model CATABOL was conducted using test data of 338 existing chemicals and 1123 new chemicals under the Japanese Chemical Substances Control Law. CATABOL predicts that 1089 chemicals will have a BOD?<?60% while 925 (85%) actually have an observed BOD<60%. The percentage of chemicals with an observed BOD value <60% tends to increase as the predicted BOD values decrease. In contrast, 340 chemicals were predicted to have a BOD?≥?60% and 234 (69%) actually had an observed BOD?≥?60%. The prediction of poor biodegradability was more accurate than the predictions of high biodegradability. The features of chemical structures affecting CATABOL predictability were also investigated.     

Enzyme catalysis of insoluble cornstarch granules: Impact on surface morphology, properties and biodegradability

Granular cornstarch was treated with microbial glucoamylase (50 mM sodium acetate buffer at pH 5.5 at 30 °C, 150 rpm) for up to 8 h. Treated starch was recovered and evaluated for changes in granular morphology, chemical properties, thermal properties, crystallinity and impact on its biodegradability. As the enzyme treatment progressed, reducing sugars began to accumulate in the liquid culture media (total of 6% in 8 h) and the granule suffered roughly 6% weight loss within 8 h of incubation. While the granules appeared intact morphologically, numerous small pits developed throughout the surface of the granules as a result of the enzyme treatment. Even after 8 h of enzyme treatment, the pitted granules were not disrupted and remained intact. X-ray diffraction indicated no loss of crystallinity in the enzyme treated granules but rather an increase in relative crystallinity, suggesting that the enzyme preferentially catalyzed the anhydroglucose units in amorphous regions of the granule. These findings were further supported by FTIR data suggesting that granules become more resistant to enzyme attack as amorphous amylose is hydrolyzed faster than the crystalline amylopectin domains. These results also suggest that variations in the crystallinity of different types of starches have the potential to affect their rates of biodegradation. Enzyme treated starch granules exhibited resistance to biodegradation, and the degree of resistance was related to the length of enzyme treatment. Granules treated with enzyme for a total of 7 h and subjected to biodegradation in soil produced 40-50% less CO₂ in a closed circuit respirometer compared to the untreated samples. Differential scanning calorimetry (DSC) thermograms showed an endothermic reaction with little change in the onset and peak temperatures indicating that glucoamylase started by degrading the starch granules from the surface.     

Properties and biodegradability of chitosan/nylon 11 blending films

Different ratios of nylon 11/chitosan blending films were prepared by solution casting method. The strength of the hydrogen bond in the blending films is weakened after addition of chitosan and spherulite growth is restricted as the ratio of chitosan increases. Sea-island morphology could be observed once the concentration of chitosan in the blends was more than 50%. Blending films are characterized by FTIR (Fourier transform infrared spectroscopy), X-ray, and scanning electron microscopy (SEM) and the biodegradability is also investigated. The extent of biodegradability for nylon 11/chitosan blending films is strongly affected by the addition percentage of chitosan.     

Renewable resource-based composites of recycled natural fibers and maleated polylactide bioplastic: Characterization and biodegradability

The thermal properties of composite materials composed of polylactide (PLA) and green coconut fiber (GCF) were evaluated. Blends containing maleic anhydride-grafted PLA (PLA-g-MA/GCF) exhibited noticeably superior thermal properties due to greater compatibility between the two components. The dispersion of GCF in the PLA-g-MA matrix was highly homogeneous as a result of ester formation, and the consequent creation of branched and cross-linked macromolecules, between the carboxyl groups of PLA-g-MA and the hydroxyl groups in GCF. In addition, the PLA-g-MA/GCF blend was more easily processed due to a lower melt viscosity. Each composite was subject to biodegradation tests in a Burkholderia cepacia BCRC 14253 compost. The bacterium completely degraded both the PLA and the PLA-g-MA/GCF composite films. Morphological observations indicated severe disruption of the film structure after 9-12 days of incubation. The PLA-g-MA/GCF (10 wt%) films were not only more biodegradable than those made of PLA, but also exhibited lower molecular weight and intrinsic viscosity, implying a strong connection between these characteristics and biodegradability.     

Aerobic and anaerobic biodegradability of polymer films and physico-chemical characterization

Aerobic and anaerobic biodegradation of four different kinds of polymers, polylactic acid, polycaprolactone, a starch/polycaprolactone blend (Mater-bi^®) and poly(butadiene adipate-co-terephthalate) (Eastar bio^®) has been studied in the solid state under aerobic conditions and in the liquid phase under both aerobic and anaerobic conditions.Several standard test methods (ISO 14851, ISO 14853, ASTM G 21-90 and ASTM G 22-76 and NF X 41-514) were used to determine the biodegradability. To determine the efficiency of the biodegradation of polymers, quantitative (mass variations, oxygen uptake, pressure variations, biogas generation and composition, biodegradation percentages) and qualitative (variation of T_g and T_f, variation of molar mass by SEC, characterization by FTIR and NMR spectroscopy) analyses were made and materials were characterized before and after 28 days of degradation.After 28 days, the degradation of materials depends on the material and on the test conditions used. The degradation is better under aerobic conditions, in particular for Mater-bi and polycaprolactone. Nevertheless, we can notice that it is the amorphous part of the polymer which is more attacked by the micro-organisms but, after 28 days, they do not seem to cleave macromolecules inside the material: bacteria attack the surface of the polymer and seem to consume the macromolecules one after another (there is no significant variation in the molar mass and no difference between FTIR and NMR spectra before degradation and after 28 days of degradation).     

Occurrence of pharmaceuticals and their metabolites in sewage sludge and soil: A review on their distribution and environmental risk assessment

The recycling and recovery of organic matter and nutrients from sewage sludge for application in agricultural soils is gaining interest, while the presence of pharmaceutically active compounds (PhACs) in this matrix may have a great impact on the environment and human health. The aim of this review paper is to outline recent research on the occurrence of PhACs and their metabolites in sewage treatment lines. A total of 32 classes of therapeutic groups including 180 PhACs and 45 metabolites have been included. In a first part, a summary of the analytical methods with a critical overview of the extraction and determination techniques, quality control issues and methodological challenges for their determination is included. Subsequently, the study gives a snapshot of the concentration levels and distribution patterns found in primary, secondary, digested (aerobically and anaerobically), dehydrated and composted sludge. Data have been systematically summarized and categorized according to matrix type, treatment processes available for PhAC degradation in sludge, and geographical areas. Our literature review showed that antimicrobials, antibiotics, non-steroidal anti-inflammatory drugs (NSAIDs), antidepressants and antidiabetics were the most abundant PhACs found in sludge matrices.Overall, attenuation of PhACs concentrations occurs during sludge stabilization, in particular during anaerobic digestion and composting. PhAC sorption onto sludge is strongly affected by the physicochemical properties, the sludge matrix and the operating and environmental conditions. Lastly, the paper discusses the impact of PhACs on sludge-amended agricultural land. The potential ecotoxicological risk associated with the presence of PhACs in amended soil is medium-low for most PhACs. The most critical compounds found in sludge-amended soil are ciprofloxacin, 17α-ethinylestradiol, 17β-estradiol, and triclocarban and triclosan.     

Characterization and biodegradability of polyester bioplastic-based green renewable composites from agricultural residues

The biodegradability, morphology, and mechanical properties of composite materials consisting of acrylic acid-grafted poly(butylene succinate adipate) (PBSA-g-AA) and agricultural residues (rice husk, RH) were evaluated. Composites containing acrylic acid-grafted PBSA (PBSA-g-AA/RH) exhibited noticeably superior mechanical properties compared with those of PBSA/RH due to greater compatibility with RH. The dispersion of RH in the PBSA-g-AA matrix was highly homogeneous as a result of ester formation, and the consequent creation of branched and cross-linked macromolecules, between the carboxyl groups of PBSA-g-AA and hydroxyl groups in RH. Each composite was subject to biodegradation tests in an Azospirillum brasilense BCRC 12270 liquid culture medium. The bacterium completely degraded both the PBSA and the PBSA-g-AA/RH composite films. Morphological observations indicated severe disruption of the film structure after 20-40 days of incubation. The PBSA-g-AA/RH (20 wt%) films were not only more biodegradable than those made of PBSA but also exhibited lower molecular weight and intrinsic viscosity, implying a strong connection between these characteristics and biodegradability.     

Water resistance, mechanical properties and biodegradability of methylated-cornstarch/poly(vinyl alcohol) blend film

The main shortcomings of biodegradable starch/poly(vinyl alcohol) (PVA) film are hydrophilicity and poor mechanical properties. With an aim to overcome these disadvantages, cornstarch was methylated and blend films were prepared by mixing methylated-cornstarch (MCS) with PVA. The mechanical properties, water resistance and biodegradability of the MCS/PVA film were investigated. It was found that MCS/PVA film had higher water resistance than the native starch/PVA film. However, the water resistance of MCS/PVA films did not have significant difference with the increase in the degree of substitution (DS) of the methylated starch from 0.096 to 0.864. Enzymatic, microbiological and soil burial biodegradation results indicated that the biodegradability of the MCS/PVA film strongly depended on the starch proportion in the film matrix. The degradation rate of starch in the starch/PVA film was hindered by blending starch with PVA. Both tensile strength and percent elongation at break of the MCS/PVA film were improved as DS of the methylated starch increased. Conversely, increasing the methylated starch proportion in film matrix deteriorated both tensile strength and percent elongation at break of the film.     

Fire retardancy and biodegradability of poly(methyl methacrylate)/montmorillonite nanocomposite

The poly(methyl methacrylate) (PMMA)/montmorillonite (MMT) nanocomposite was prepared by emulsifier-free emulsion technique and its structure and properties were characterized with infra red, X-ray diffraction, transmission electron microscopy, thermogravimetric analysis, and cone calorimetry. The highly exfoliated MMT layers with dimension 1-2 nm in thickness were randomly dispersed in the polymer matrix containing MMT lower than 5% w/v, whereas the intercalated structure was predominant with MMT content higher than 5% w/v. Consequently, the fine dispersion of the MMT and the strong interactions between PMMA and MMT created significant improvement of the thermo-stability and fire retardancy of the nanocomposite. The combustion behavior has been evaluated using oxygen consumption cone calorimetry. In addition, a scheme was proposed to describe fire retardancy of PMMA and MMT as well as the correlation between the interaction and structure in polymer/clay systems. The biodegradability of the nanocomposite fire-retardant was tested for its better commercialization.     

Synthesis and single crystal X-ray analysis of two griseofulvin metabolites

The two phenols, 6-O-desmethyl griseofulvin and 4-O-desmethyl griseofulvin are metabolites of the antifungal drug griseofulvin. Herein, we present an improved synthesis of the 6-phenol derivative, and an unequivocal proof of both structures by single-crystal X-ray analysis.     

GC-MS analysis of dichlobenil and its metabolites in groundwater

We have developed a new method for the determination of the widely used herbicide 2,6-dichlorobenzonitrile (dichlobenil) and its major metabolites 2,6-dichlorobenzamide (BAM) and 2,6-dichlorobenzoic acid (2,6-DCBA) in groundwater samples. The procedure is based on solid phase extraction (SPE) combined with a derivatization procedure before GC-MS analysis in order to quantify analytes simultaneously. This method can be used from regulatory laboratories for monitoring the presence of dichlobenil and its metabolites during testing groundwater samples quality.     

Determination of polycyclic aromatic hydrocarbon metabolites in milk by a quick,easy, cheap,effective, rugged and safe extraction and capillary electrophoresis

We describe the first application of a quick, easy, cheap, effective, rugged and safe extraction technique to the CZE analysis of monohydroxylated metabolites of polycyclic aromatic hydrocarbons in milk. Complete resolution of 2‐hydroxyfluorenene, 1‐hydroxynaphthalene, 2‐hydroxynaphthalene, 3‐hydroxyphenanthrene, and 9‐hydroxyphenanthrene was accomplished in 4 min of electrophoretic run. Limits of detection at the parts‐per‐billion were obtained with a single solvent (acetonitrile) for metabolite extraction and sample stacking. The small sample volume (1.2 mL) and the conservative usage of chemicals provided a simple and rapid procedure for the simultaneous extraction of numerous samples. Adding 4 min of electrophoretic run per sample, it should be possible to screen ten samples in approximately 1 h of analysis time. The nanoliter extract volume required for sample injection allows for further chromatographic usage and confirmation of positive samples. The unique electrophoretic pattern of the studied metabolites demonstrates the potential for the unambiguous determination of positional isomers with very similar chromatographic behaviors and undistinguishable mass fragmentation patterns.     

Determination of chlorproguanil and metabolites in biological fluids

Summary The retention behaviour of chlorproguanil and its putative metabolites chlorcycloguanil and 3,4-dichlorophenylbiguanide has been studied on a reversed phase chromatographic system incorporating sodium lauryl sulphate as hydrophobic pairing ion. On the basis of data obtained and comparison of standard compounds with components present in urine following the administration of chlorproguanil, the identity of the metabolites have been confirmed chromatographically. A third unidentified metabolite is also observed. The retention study allows selection of a solvent system which, when used with a small volume, 100 × 2 mm, 3μm ODS column, enables chlorproguanil and its two major metabolites to be determined in plasma, whole blood and urine. The analytical characteristics of the method are reported and the usefullness of the method in obtaining pharmacokinetic data on the drug and its metabolites is discussed.