Reversible collapse of brushlike macromolecules in ethanol and water vapours as revealed by real-time scanning force microscopy

Environment-controlled scanning force microscopy allowed us to study adsorption and desorption of single poly(methacrylate)-graft-poly(n-butyl acrylate) brush molecules on mica in real time. The molecules transform reversibly from a two-dimensional, extended wormlike state to a compact globular state. The dynamics of the conformational transition was sufficiently slow in order to allow its observation by scanning force microscope in real time. The reversible transformation is effected by coadsorption of water or ethanol, the latter introduces the collapse. Adsorbing ethanol and water from the vapour atmosphere results in a change of the surface properties of mica, either favouring adsorption or desorption of the graft polymer. When the extended, tightly adsorbed poly(n-butyl acrylate) brush molecules are exposed to ethanol vapour, the macromolecules swell and contract to form compact globules. Exchanging the ethanol vapour to a humid atmosphere caused the molecules to extend again to a wormlike two-dimensional conformation. Coexistence of collapsed and extended strands within the same molecule indicates a single-molecule first-order transition in agreement with observations on Langmuir films previously reported.     

Solid-like states of a dendrimer liquid displayed by scanning force microscopy

Adsorption and aggregation of carbosiloxane dendrimers on mica and pyrolytic graphite were investigated by scanning force microscopy (SFM). The aggregation process started from (i) single molecules which coagulated to (ii) clusters and (iii) fluid droplets followed by formation of (iv) a complete layer on the solid substrate. The molecules were displayed as a globular particle with a diameter of about 2.5 nm. Tapping SFM of the liquid was possible due to the fact that the dendrimer undergoes a transition to a viscoelastic state below the tapping frequency of about 360 kHz. Dynamic shear compliance experiments have shown a plateau of 5 · 10⁻⁷ Pa⁻¹ around this frequency. Dendrimer droplets slowly spread into polygonal lamellae with a thickness of two molecular layers. The structures indicate a rather regular dense packing of the globular molecules.     

Selective internal manipulation of a single molecule by scanning tunneling microscopy

We have studied the adsorption of the polyaromatic molecule 1,4"-paratriphenyldimethylacetone, which we have nicknamed Trima. The originality of this linear molecule is that it was designed and synthesized to have two functionalities. First, chemisorb itself to the surface by its two ends rather like a bridge. Second, the central part of the molecule could then be rotated by injecting electrons with the tip of the scanning tunneling microscope (STM). The length of the molecule corresponds exactly to the spacing between five dimers in a row on the Si(100)-2 x 1 surface. We found that the molecule adsorbs as expected on the clean silicon surface by using complementary STM and synchrotron radiation studies. Manipulation of individual molecules with the STM tip showed selective internal modifications that were highly voltage dependent. These manipulations were found to be compatible with an electronic excitation of the pi-pi* transition of the molecule.     

A single-cell analysis of myogenic dedifferentiation induced by small molecules

An important direction in chemical biology is the derivation of compounds that affect cellular differentiation or its reversal. The fragmentation of multinucleate myofibers into viable mononucleates (called cellularization) occurs during limb regeneration in urodele amphibians, and the isolation of myoseverin, a trisubstituted purine that could apparently activate this pathway of myogenic dedifferentiation in mammalian cells, generated considerable interest. We have explored the mechanism and outcome of cellularization at a single-cell level, and we report findings that significantly extend the previous work with myoseverin. Using a panel of compounds, including a triazine compound with structural similarity and comparable activity to myoseverin, we have identified microtubule disruption as critical for activation of the response. Time-lapse microscopy has enabled us to analyze the fate of identified mononucleate progeny, and directly assess the extent of dedifferentiation.     

A single molecule view of bistilbene photoisomerization on a surface using scanning tunneling microscopy

The advent of scanning tunneling microscopy (STM) has permitted a detailed atomic view of organic molecules adsorbed on solid surfaces. In this work, we make use of the STM to provide an unprecedented direct single-molecule perspective on the cis-trans photoisomerization of stilbene molecules within ordered monolayers physisorbed on the Ag/Ge(111)-( radical3x radical3)R30 degrees surface. The STM view of the molecular structure transformation upon irradiation provides direct evidence for the generally accepted one-bond-flip mechanism proposed for the photoisomerization process. We also find that the surface environment produces a profound effect on the reaction mechanism. The reaction is observed to proceed mainly through pairs of co-isomerizing molecules situated at domain boundaries. To explain these observations, we propose a mechanism whereby excitation migrates to the domain boundary and the reaction occurs through a biexciton reaction pathway.     

Effects of the chain microstructure on the properties of polyketones terpolymers characterized by scanning force microscopy

A new approach is described to tailor properties of polyketones based on the controlled modification of the block structure by varying the polymerization process. Ethylene-propylene-CO (ECOPCO) terblock copolymers with similar composition but different chain microstructures have been synthesized using either preset polymerization (PSP) or pulsed-feed polymerization (PFP), respectively. Whereas by PSP an ABC-triblock structure is obtained, the PFP results in [AB]_n-multiblock structure. In this paper we investigate the influence of the chain microstructure on the mechanical behavior and the surface properties.SFM phase images display a phase-separated bulk morphology where triblock polymers due to the larger block lengths form coarser structures than the multiblock samples. If the ECO content is above 50%, partially crystalline lamellar structures can be found, which in case of the multiblock sample form a continuous network of lamellar-like ECO rich domains. All ECOPCO terpolymers reveal elastomeric behavior with an elastic recovery of at least 82% but tensile strength and elongation vary with the block length of the chain microstructures. Differences in elasticity are explained by the formation of different amounts of cross-links consisting of blocks of parallel-aligned ECO chain segments or crystalline lamellae. It can be shown that the surface morphology differs from bulk morphology, mainly by the point that no distinct phase separation appears but ECO rich domains can be detected. Surface tension measurements enable to correlate the surface energy with surface composition and surface morphology.     

Compression-inhibited pore formation of polyelectrolyte multilayers containing weak polyanions: a scanning force microscopy study.

Morphological changes of poly(acrylic acid)/poly(diallyldimethylammonium chloride) multilayers induced by low pH were investigated by scanning force microscopy. The weakened interaction between the charged polymer chains in the protonation process is believed to be the reason for this variation. Kinetic studies have shown that during protonation phase separation and dissociation of the multilayers took place successively. The compression of the multilayers, however, caused a transition of the multilayers from a rubbery state to a glassy state. As a result, the closely compacted multilayers lost their sensitivity to pH change. An increase of electrostatic and hydrophobic interactions, can decrease the free energy of the multilayers, and stabilize the films. By compression of the multilayers with a rubber stamp having geometric patterns, films with spatially localized pores were produced.     

The influence of contamination on compositional imaging of self-assembled monolayers by scanning force microscopy

We prepared patterned self-assembled monolayers (SAMs) consisting of hexadecanethiol (16AT) and ferrocenyldodecanethiol (12FAT). The samples were characterized by scanning force microscopy (SFM), X-ray photoelectron spectroscopy (XPS), electrochemistry and contact angle measurements. Lateral force mode (LFM) of SFM shows image contrast even between surface regions of quite similar hydrophobicity. The 12FAT regions undergo irreversible chemical changes and become electrochemically inactive upon long exposure to the laboratory atmosphere. These chemical changes can be monitored by LFM, XPS, contact angle and electrochemistry. The LFM images of the exposed and contaminated samples show a reversed frictional contrast relative to the LFM images of the fresh samples and to the LFM images of the exposed but ethanol-rinsed sample. XPS and SFM data show that the 12FAT regions show more contamination than the 16AT regions. Based on these observations, the mechanism of the LFM image contrast is discussed and other driving forces, arising not only from differences in hydrophobicity but also from basic material properties such as elasticity, packing and contamination, are suggested.     

Delamination of organic coating on carbon steel studied by scanning Kelvin probe force microscopy

Corrosion‐induced delamination of an epoxy coating on the AISI/SAE 1045 carbon steel was studied under a humid atmospheric condition (temperature of 25 °C, 1 standard atmospheric pressure, relative humidity of 90%) by the technique of scanning Kelvin probe force microscopy (SKPFM). Surface‐polished 1045 samples were first cold‐coated with the epoxy and then subject to the atmospheric corrosion under the specified condition. At predetermined time intervals, surface Volta potential differences of the samples were measured using the SKPFM over the dry surface of epoxy coating. The map of Volta potential differences demonstrated high contrasts among three characteristic zones: intact steel‐epoxy interface, delaminated interface, and interface with active corrosion, which was then linked to the actual corrosion potential of the steel (measured using a potentiostat with respect to a saturated calomel electrode) based on a rigorous calibration procedure. It was found that the SKPFM was able to provide direct and nondestructive detection of early active corrosion and coating delamination on steels at a submicroscopic resolution, which outperformed the conventional electrochemical techniques for the same purposes. Copyright © 2012 John Wiley & Sons, Ltd.     

In situ study of water-induced segregation of bromide in bromide-doped sodium chloride by scanning polarization force microscopy

The adsorption of water on Br-doped NaCl crystals has been studied in situ using scanning polarization force microscopy, a noncontact electrostatic atomic force microscopy operation mode. Both topography and contact potential images were acquired as a function of relative humidity at room temperature, from 0% to more than 55%. It was found that the surface of the freshly cleaved crystal has an inhomogeneous electrical surface potential distribution with the steps more negative than the terraces below 40% relative humidity. This difference disappears when the humidity reaches 40% and higher. Below 40% the step morphology experiences only small changes due to water adsorption; however, above 40% major changes take place due to solvation, segregation, and redistribution of lattice ions. Bromide-rich islands and crystallites segregate to the surface above 40% relative humidity followed by drying. These islands and crystallites have a negative surface potential relative to the rest of the surface. These effects are attributed to the preferential solvation and segregation of Br- ions.     

Investigation on the surface orientation of cylindrical microdomains in styrene-butadiene-styrene triblock copolymers by scanning force microscopy/transmission electron microscopy

The orientation of the microdomains at the free surface of solvent-cast films of a polystyrene-block-polybutadiene-block-polystyrene triblock copolymer with cyclindrical morphology was studied by coupling transmission electron and scanning force microscopies (SFM-TEM). It was found that the cylinders of polystyrene, which are assembled in grains randomly oriented in the bulk, tend to reorient with the main axis perpendicular to the surface. SFM investigation indicates that the hexagonal symmetry of the cylinders is also maintained at the free surface which is characterized by protrusions and corrugation with size and characteristic distances closely related to the cylindrical morphology visible in the bulk. Good quantitative agreement between TEM and SFM measurements is observed.     

Mimicking both petal and lotus effects on a single silicon substrate by tuning the wettability of nanostructured surfaces

We describe a new method of fabricating large-area, highly scalable, "hybrid" superhydrophobic surfaces on silicon (Si) substrates with tunable, spatially selective adhesion behavior by controlling the morphologies of Si nanowire arrays. Gold (Au) nanoparticles were deposited on Si by glancing-angle deposition, followed by metal-assisted chemical etching of Si to form Si nanowire arrays. These surfaces were chemically modified and rendered hydrophobic by fluorosilane deposition. Au nanoparticles with different size distributions resulted in the synthesis of Si nanowires with very different morphologies (i.e., clumped and straight nanowire surfaces). The difference in nanowire morphology is attributed to capillary force-induced nanocohesion, which is due to the difference in nanowire porosity. The clumped nanowire surface demonstrated the lotus effect, and the straighter nanowires demonstrated the ability to pin water droplets while maintaining large contact angles (i.e., the petal effect). The high contact angles in both cases are explained by invoking the Cassie-Baxter wetting state. The high adhesion behavior of the straight nanowire surface may be explained by a combination of attractive van der Waals forces and capillary adhesion. We demonstrate the spatial patterning of both low- and high-adhesion superhydrophobicity on the same substrate by the simultaneous synthesis of clumped and straight silicon nanowires. The demonstration of hybrid superhydrophobic surfaces with spatially selective, tunable adhesion behavior on single substrates paves the way for future applications in microfluidic channels, substrates for biologically and chemically based analysis and detection where it is necessary to analyze a particular droplet in a defined location on a surface, and as a platform to study in situ chemical mixing and interfacial reactions of liquid pearls.     

Atomic force microscopy for the characterization of immobilized enzyme molecules on biosensor surfaces

The development of biosensors has been one of the key areas in biotechnology and biomedical studies. Often it is difficult to investigate the immobilized biomolecules on the surfaces for biosensor optimization. Atomic force microscopy (AFM) should provide an ideal means for the visualization of biosensor surface and for the investigation of biomolecule activities. Therefore, AFM has been employed to study the surface topography of immobilized glutamate dehydrogenase (GDH) on two-dimensional glutamate biosensor surfaces. Correlation between the surface topography and the activity of the biosensor was investigated. Surface analysis has revealed that the enzymatic activity of the immobilized GDH molecules on the biosensor surface is linked to surface roughness, as measured by the peak-to-valley distance. Fractal dimension of the immobilization sensor surface was found to be a good parameter for judging the quality of the immobilized biosensors. As enzyme immobilization time increases, the biosensor has its maximum activity with around 18 h of immobilization in 10^–6 M GDH solution. Various biosensors prepared under different experimental conditions have been studied by AFM. This technique is shown to be an effective tool to characterize biosensor surfaces.     

Atomic force microscopy for the characterization of immobilized enzyme molecules on biosensor surfaces

The development of biosensors has been one of the key areas in biotechnology and biomedical studies. Often it is difficult to investigate the immobilized biomolecules on the surfaces for biosensor optimization. Atomic force microscopy (AFM) should provide an ideal means for the visualization of biosensor surface and for the investigation of biomolecule activities. Therefore, AFM has been employed to study the surface topography of immobilized glutamate dehydrogenase (GDH) on two-dimensional glutamate biosensor surfaces. Correlation between the surface topography and the activity of the biosensor was investigated. Surface analysis has revealed that the enzymatic activity of the immobilized GDH molecules on the biosensor surface is linked to surface roughness, as measured by the peak-to-valley distance. Fractal dimension of the immobilization sensor surface was found to be a good parameter for judging the quality of the immobilized biosensors. As enzyme immobilization time increases, the biosensor has its maximum activity with around 18 h of immobilization in 10(-6) M GDH solution. Various biosensors prepared under different experimental conditions have been studied by AFM. This technique is shown to be an effective tool to characterize biosensor surfaces.     

Motion of single DNA molecules at a liquid-solid interface as revealed by variable-angle evanescent-field microscopy

A variable-angle total-internal-reflection fluorescence microscope (VATIRFM) capable of providing a large range of incident angles was constructed for imaging single DNA molecule dynamics at a solid/liquid interface. An algorithm using a public-domain image-processing program, ImageJ, was developed for single-molecule counting. The experimental counts at various incident angles with different evanescent-field layer (EFL) thicknesses are affected by molecular diffusion. The dynamics of molecules near the surface and the observed counts in the VATIRFM are elucidated using a limited one-dimensional random-walk diffusion model. The simulation fits well with the experimental counting results. Further analysis using the simulation reveals the details of single-molecule motion. One implication is that the measured intensities cannot be used directly to determine the distances of molecules from the surface, though the majority of fluorescence does come from the EFL. Another implication is that rather than providing molecular concentrations within EFL the experimental counting results depict the distance-dependent dynamics of molecules near the surface. Thus, the VATIRFM could be a powerful technique to study the surface repulsion/attraction of molecules within a few hundred nanometers of the surface. Further studies show that molecules at low ionic strengths experience electrostatic repulsion at distances much further away from the surface than the calculated thickness of the electrical double layer.     

Investigations on geometrical features in induced ordering of collagen by small molecules

Binding energies of the interaction of collagen like triple helical peptides with a series of polyphenols, viz. gallic acid, catechin, epigallocatechingallate and pentagalloylglucose have been computed using molecular modelling approaches. A correlation of calculated binding energies with the interfacial molecular volumes involved in the interaction is observed. Calculated interface surface areas for the binding of polyphenols with collagen-like triple helical peptides vary in the range of 60–210 ?² and hydrogen bond lengths vary in the range of 2.7–3.4 ?. Interfacial molecular volumes can be calculated from the solvent inaccessible surface areas and hydrogen bond lengths involved in the binding of polyphenols to collagen. Molecular aggregation of collagen in the presence of some polyphenols and chromium (III) salts has been probed experimentally in monolayer systems. The monolayer arrangement of collagen seems to be influenced by the presence of small molecules like formaldehyde, gluteraldehyde, tannic acid and chromium (III) salts. A fractal structure is observed on account of two-dimensional aggregation of collagen induced by tanning species. Atomic force microscopy has been employed to probe the topographic images of two-dimensional aggregation of collagen induced by chromium (III) salts. A case is made that long-range ordering of collagen by molecular species involved in its stabilisation is influenced by molecular geometries involved in its interaction with small molecules. Dedicated to Professor C N R Rao on his 70th birthday     

Unbinding of the streptavidin-biotin complex by atomic force microscopy: a hybrid simulation study

A hybrid molecular simulation technique, which combines molecular dynamics and continuum mechanics, was used to study the single-molecule unbinding force of a streptavidin-biotin complex. The hybrid method enables atomistic simulations of unbinding events at the millisecond time scale of atomic force microscopy (AFM) experiments. The logarithmic relationship between the unbinding force of the streptavidin-biotin complex and the loading rate (the product of cantilever spring constant and pulling velocity) in AFM experiments was confirmed by hybrid simulations. The unbinding forces, cantilever and tip positions, locations of energy barriers, and unbinding pathway were analyzed. Hybrid simulation results from this work not only interpret unbinding AFM experiments but also provide detailed molecular information not available in AFM experiments.