Structure, bonding, and solvation of dilithiodiamines

Computational methods were used to determine the structure of dilithiodiamines and the effects of solvation by ethereal solvents. Solvation was examined by the use of microsolvation with explicit dimethyl ether or THF ligands and by the combined use of microsolvation and the IEFPCM continuum solvent model. It was determined that each of the compounds studied exists exclusively as a bridged intramolecular dimer, both in the gas phase and in solution. Thermodynamic properties were calculated at 200 and 298 K to estimate the effect of temperature on the cyclization energies. Infrared spectroscopy was used to confirm the proposed intramolecular dimer structures.     

Hydrogen bonding, solvation, and hydrolysis of cisplatin: a theoretical study

Density functional calculations on a range of hydrogen bonded clusters of cisplatin are reported. A systematic search of 1:1 cisplatin:water complexes reveals only three stable minima, which contain a number of common, recurring interactions, such as an N-H...O-H...Cl bridging mode. Expanding these clusters by adding water molecules leads to a model of the first solvation shell of cisplatin, which contains the above motifs along with several strong water-water interactions. The strengths of such interactions are rationalized on the basis of electrostatic potentials, and quantified by use of Atoms in Molecules properties. This analysis also allows us to estimate cisplatin's position on Abraham's hydrogen bond acidity and basicity scales, indicating that cisplatin is a strong donor and acceptor of hydrogen bonds due to the dominance of hard, electrostatic interactions. The effects of this explicit solvation on the barrier to hydrolysis, and hence activation, of cisplatin are explored, indicating a slightly higher barrier than in the gas phase, leading to better agreement with experiment than either gas phase or continuum solvation calculations.     

Structure, bonding, and magnetism in manganese clusters

We investigate the structures and magnetic properties of small Mn(n) clusters in the size range of 2-13 atoms using first-principles density functional theory. We arrive at the lowest energy structures for clusters in this size range by simultaneously optimizing the cluster geometries, total spins, and relative orientations of individual atomic moments. The results for the net magnetic moments for the optimal clusters are in good agreement with experiment. The magnetic behavior of Mn(n) clusters in the size range studied in this work ranges from ferromagnetic ordering (large net cluster moment) for the smallest (n=2, 3, and 4) clusters to a near degeneracy between ferromagnetic and antiferromagnetic solutions in the vicinity of n=5 and 6 to a clear preference for antiferromagnetic (small net cluster moment) ordering at n=7 and beyond. We study the details of this evolution and present a picture in which bonding in these clusters predominantly occurs due to a transfer of electrons from antibonding 4s levels to minority 3d levels.     

Thermochemistry of dissolution,solvation, and hydrogen bonding of anilines in proton-acceptor organic solvents at 298.15 K

Enthalpies of dissolution at infinite dilution (298.15 K) of aniline, N-methylaniline, and N,N-dimethylaniline in a series of proton-acceptor solvents of different classes of compounds have been measured. The solvation enthalpies have been determined, and its relationship with the anilines structure has been analyzed. Enthalpy of hydrogen bonding in the complexes of aniline (1: 2) and N-methylaniline (1: 1) with the solvents has been calculated. In the case of aniline complexes, negative cooperativity of hydrogen bonding has been revealed, the effect enhancing with increasing the solvent proton-acceptor ability.     

Structure, energetics, and bonding of amorphous Au-Si alloys

First principles periodic calculations based on gradient-corrected density functional theory have been performed to examine the structure, energetics, and bonding of amorphous Au-Si alloys with varying Au:Si composition ratios. Our results predict that the Au-Si alloy forms the most stable structure when the Si content is around 40-50 at. %, with an energy gain of about 0.15 eV/atom. In addition, the volume change per atom in the alloy exhibits a distinctive nonlinear trend, with the minimum value around 60 at. % Si. The occurrence of the minimum in the Au-Si mixing energy and volume is attributed to strong hybridization of the Au 5d-Si 3p states. We also present variations in the radial distribution function and atomic coordination number as a function of Au:Si composition ratio, with discussion of the nature of local packing and chemical bonding in the Au-Si alloy system.     

Structure, bonding, and aggregation of selenium-containing organolithium species

1,3-Dioxo compounds can be prepared from selenium-mediated carbonylation of lithium enolates in the presence of carbon monoxide. Intermediates in this reaction include several organic species that contain both selenium and lithium. The first step in understanding the detailed reaction mechanism is to understand the structure of these intermediates. Like most organolithium compounds, these species can exist as aggregates in solution. The B3LYP density functional theory (DFT) method was used to examine the gas phase and THF solvated structures of these compounds. The calculations showed that each of the compounds forms dimers or higher aggregates in the gas phase. Aggregates are also formed in THF solution, although solvation favors lower aggregates as compared to the gas phase.     

Comparative study on the nonadditivity of methyl group in lithium bonding and hydrogen bonding

Quantum chemical calculations at the second‐order Moeller–Plesset (MP2) level with 6‐311++G(d,p) basis set have been performed on the lithium‐bonded and hydrogen‐bonded systems. The interaction energy, binding distance, bond length, and stretch frequency in these systems have been analyzed to study the nonadditivity of methyl group in the lithium bonding and hydrogen bonding. In the complexes involving with NH₃, the introduction of one methyl group into NH₃ molecule results in an increase of the strength of lithium bonding and hydrogen bonding. The insertion of two methyl groups into NH₃ molecule also leads to an increase of the hydrogen bonding strength but a decrease of the lithium bonding strength relative to that of the first methyl group. The addition of three methyl groups into NH₃ molecule causes the strongest hydrogen bonding and the weakest lithium bonding. Although the presence of methyl group has a different influence on the lithium bonding and hydrogen bonding, a negative nonadditivity of methyl group is found in both interactions. The effect of methyl group on the lithium bonding and hydrogen bonding has also been investigated with the natural bond orbital and atoms in molecule analyses. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

The solvation, partitioning, hydrogen bonding, and dimerization of nucleotide bases: a multifaceted challenge for quantum chemistry

We present M06-2X density functional calculations of the chloroform/water partition coefficients of cytosine, thymine, uracil, adenine, and guanine and calculations of the free energies of association of selected unsubstituted and alkylated nucleotide base pairs in chloroform and water. Both hydrogen bonding and π-π stacking interactions are considered. Solvation effects are treated using the continuum solvent models SM8, SM8AD, and SMD, including geometry optimization in solution. Comparison of theoretical results with available experimental data indicates that all three of these solvation models predict the chloroform-water partition coefficients for the studied nucleobases qualitatively well, with mean unsigned errors in the range of 0.4-1.3 log units. All three models correctly predict the preference for hydrogen bonding over stacking for nucleobase pairs solvated in chloroform, and SM8, SM8AD, and SMD show similar accuracy in predicting the corresponding free energies of association. The agreement between theory and experiment for the association free energies of the dimers in water is more difficult to assess, as the relevant experimental data are indirect. Theory predicts that the stacking interaction of nucleobases in water is more favorable than hydrogen bonding for only two out of three tested hetero-dimers.     

Structure, bonding, and catecholase mechanism of copper bispidine complexes

Oxygen activation by copper(I) complexes with tetra- or pentadentate mono- or dinucleating bispidine ligands is known to lead to unusually stable end-on-[{(bispidine)Cu}(2)(O(2))](2+) complexes (bispidines are methyl-2,4-bis(2-pyridin-yl)-3,7-diazabicyclo-[3.3.1]-nonane-9-diol-1,5-dicarboxylates); catecholase activity of these dinuclear Cu(II/I) systems has been demonstrated experimentally, and the mechanism has been thoroughly analyzed. The present density functional theory (DFT) based study provides an analysis of the electronic structure and catalytic activity of [{(bispidine)Cu}(2)(O(2))](2+). As a result of the unique square pyramidal coordination geometry, the d(x(2)-y(2)) ground state leads to an unusual σ/π bonding pattern, responsible for the stability of the peroxo complex and the observed catecholase activity with a unique mechanistic pathway. The oxidation of catechol to ortho-quinone (one molecule per catalytic cycle and concomitant formation of one equivalent of H(2)O(2)) is shown to occur via an associative, stepwise pathway. The unusual stability of the end-on-peroxo-dicopper(II) complex and isomerization to copper(II) complexes with chelating catecholate ligands, which inhibit the catalytic cycle, are shown to be responsible for an only moderate catalytic activity.     

Ketone enolization with lithium dialkylamides: the effects of structure,solvation, and mixed aggregates with excess butyllithium

The effects of lithium dialkylamide structure, mixed aggregate formation, and solvation on the stereoselectivity of ketone enolization were examined. Of the lithium dialkylamides examined, lithium tetramethylpiperidide (LiTMP) in THF resulted in the best enolization selectivity. The stereoselectivity was further improved in the presence of a LiTMP-butyllithium mixed aggregate. The use of less polar solvents reduced the enolization stereoselectivity. Ab initio calculations predict LDA and LiTMP to form mixed cyclic dimers in ethereal solvents. The calculations also predict LiTMP-alkyllithium mixed aggregates to competitively inhibit the formation of less stereoselective LiTMP-lithium enolate mixed aggregates.     

The thermodynamic properties and solvation of lithium halides in N-methylpyrrolidone at 298.15 K

The heat capacity and density of solutions of lithium chloride, bromide, and iodide in N-methylpyrrolidone (I) were determined by calorimetry and densimetry techniques. The standard partial molar heat capacities and volumes ( $\overline {C^\circ _{p2} } $ and $\overline {V^\circ _2 } $ ) of lithium halides in I were calculated. The $\overline {C^\circ _{pi} } $ and $\overline {V^\circ _i } $ values for halogen and lithium ions in I were determined. The coordination numbers of the Li⁺, Cl^?, Br^?, and I^? ions in solutions in I at 298.15 K were calculated.     

Determination of primary and secondary solvation numbers and binding constants based on the shift of a proton-transfer equilibrium resulting from hydrogen bonding solvation

We show how the shift in the equilibrium constant K _PT for formation of a proton-transfer adduct in a non-interactive solvent, upon addition of a second, hydrogen-bonding solvent S reveals the nature of the hydrogen bonding solvation process. Data are analyzed for the pentachlorophenoltriethylamine proton-transfer equilibrium in cyclohexane solvent, under-going solvation by the acidic alcohols, 2,2,2-trichloroethanol and 1,1,1,3,3,3-hexafluoro-2-propanol. K _PT vs. [S] data are fitted to a binding isotherm corresponding to two-stage solvation of both the adduct and the free amine. Stoichiometries and binding constants for both primary and secondary solvation of both solvated species are determined as adjustable parameters. Best fits correspond to both the adduct and free amine under-going primary solvation by one alcohol molecule (presumably at the oxygen and nitrogen lone-pairs, respectively) followed by secondary solvation by one to nine additional alcohol molecules, with binding constants ranging from 2100 M^–1, for primary solvation of the adduct by hexafluoro-2-propanol, down to 7 M^–1, for secondary solvation of the amine by trichloroethanol. We speculate that the secondary solvation numbers represent average sizes of hydrogen-bonded alcohol chains, nucleated by the enhanced basicity of the primary-solvation alcohol.     

Hydrogen bonding of aliphatic and aromatic amines in aqueous solution: thermochemistry of solvation

Thermochemistry of hydration of the aliphatic and aromatic amines was studied. Enthalpies of solution at infinite dilution of amines in water were measured using the method of solution calorimetry. A procedure of taking into account the ionization and non-specific hydration of amines in aqueous media was carried out. A method for estimating the enthalpy of hydrogen bonding of amines in aqueous solutions was suggested on the basis of a comparative analysis of the solvation enthalpies of the solutes in water and methanol. The efficiency of this method is confirmed by evaluating the hydrophobic effect enthalpy.     

Structure,hydrogen bonding and vibrational spectra of pyruvic acid

The complete vibrational spectra of liquid pyruvic acid and the infrared spectrum of crystalline pyruvic acid at about 20 K have been recorded and analyzed. A vibrational assignment is proposed based on these spectra and comparison with spectra of derivatives of pyruvic acid.The spectra of pyruvic acid can best be interpreted in terms of a cyclic hydrogen-bonded dimer structure in which the two carbonyl groups are in a trans configuration in the pure liquid phase. A similar structure has been reported for crystalline pyruvic acid by X-ray diffraction. In dilute solution the structure appears to be monomeric with an internal hydrogen bond, in essential agreement with the structures of the monomer reported from microwave spectroscopic measurements.     

CNDO/2 study on lithium bonding in lithium methoxide—Amine systems

A systematic CNDO/2 study has been carried out on the lithium-bonded model systems, CH₃OLi–NR ₃, formed between lithium methoxide and aliphatic amines. Significant correlations between calculated molecular properties of the complexes and the ionization potentials of the amines have been found, and these are discussed on the basis ofMulliken's charge transfer theory. Similarities and differencies between the lithium bond and the hydrogen bond are discussed.

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CNDO/2 Untersuchungen der Lithium-Bindung in Lithiummethoxid—Amin-Systemen

Zusammenfassung Es wurde für das Modellsystem CH₃OLi–NR ₃ eine systematische CNDO/2 Studie durchgeführt um die Lithium-Bindung zwischen Lithiummethoxid und einer Reihe von aliphatischen Aminen zu untersuchen. Es wurde eine signifikante Korrelation zwischen den berechneten Eigenschaften der Komplexe und den Ionisierungspotentialen der Amine gefunden; das wird auf Basis der Elektronen-Donor-Acceptor Theorie nachMulliken diskutiert. Lithium-und Wasserstoff-Brücken-Bindung werden gegenübergestellt und Analogien bzw. Unterschiede herausgearbeitet.

     

Electrolyte and interphase engineering through solvation structure regulation for stable lithium metal batteries

Lithium metal batteries (LMBs) are considered to be one of the most promising high-energy-density battery systems. However, their practical application in carbonate electrolytes is hampered by lithium dendrite growth, resulting in short cycle life. Herein, an electrolyte regulation strategy is developed to improve the cyclability of LMBs in carbonate electrolytes by introducing LiNO₃ using trimethyl phosphate with a slightly higher donor number compared to NO₃⁻ as a solubilizer. This not only allows the formaion of Li⁺-coordinated NO₃⁻ but also achieves the regulation of electrolyte solvation structures, leading to the formation of robust and ion-conductive solid-electrolyte interphase films with inorganic-rich inner and organic-rich outer layers on the Li metal anodes. As a result, high Coulombic efficiency of 99.1% and stable plating/stripping cycling of Li metal anode in Li||Cu cells were realized. Furthermore, excellent performance was also demonstrated in Li||LiNi_0.83Co_0.11Mn_0.06O₂ (NCM83) full cells and Cu||NCM83 anode-free cells using high mass-loading cathodes. This work provides a simple interphase engineering strategy through regulating the electrolyte solvation structures for high-energy-density LMBs.