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微柱高效液相色谱-质谱/质谱快速鉴定混合蛋白质新方法
引用本文:张素艳,王静,卞利萍,许云敏,王洪海,杨芃原.微柱高效液相色谱-质谱/质谱快速鉴定混合蛋白质新方法[J].高等学校化学学报,2002,23(7):1246-1250.
作者姓名:张素艳  王静  卞利萍  许云敏  王洪海  杨芃原
作者单位:1. 复旦大学化学系,上海,200433
2. 复旦大学遗传研究所,上海,2004333
3. 复旦大学遗传研究所,上海,2004333,复旦大学蛋白质组学研究中心,上海,200433
4. 复旦大学化学系,上海,200433;复旦大学蛋白质组学研究中心,上海,200433
基金项目:国家重点基础研究专项经费 (批准号 :2 0 0 1CB5 10 2 ),上海市科学技术委员会重点项目资助
摘    要:发展了一种混合蛋白质快速鉴定的新方法,将几种蛋白质的混合物于热变性后直接在溶液中酶解,利用微柱高效液相色谱-离子阱串级质谱进行肽谱/氨基酸序列分析,并结合Mascot数据库搜索处理功能,实现了混合蛋白质快速准确的鉴定。

关 键 词:混合蛋白质  鉴定  蛋白质组学  微柱高效液相色谱  离子阱质谱/质谱  序列分析
文章编号:0251-0790(2002)07-1246-05

A New Technique to Identify Individual Protein in Complex by Microcolumn-HPLC-ESIMS/MS
ZHANG Su Yan ,WANG Jing ,BIAN Li Ping ,XU Yun Min ,WANG Hong Hai ,YANG Peng Yuan.A New Technique to Identify Individual Protein in Complex by Microcolumn-HPLC-ESIMS/MS[J].Chemical Research In Chinese Universities,2002,23(7):1246-1250.
Authors:ZHANG Su Yan  WANG Jing  BIAN Li Ping  XU Yun Min  WANG Hong Hai    YANG Peng Yuan
Institution:ZHANG Su Yan 1,WANG Jing 1,BIAN Li Ping 1,XU Yun Min 2,WANG Hong Hai 2,3,YANG Peng Yuan 1,3 *
Abstract:In this work the identification method for protein mixture is reported, in which several proteins were varified by HPLC ESIMS/MS after the whole complex proteins were directly digested in solution, instead of the routine 2 dimensional gel electrophoresis. The obtained data was then searched against NCBInr database by using MS/MS Ions Search(http://www.matrixscience.com), and a positive result was therefore obtained. With the simulated sequence spectra in database searching, a re identification method was developed for low score matched protein by sequence tag technique. As a typical example, Concanavalin A, a less soluble protein with a low matching score, was also successfully identified, which indicated the great potential of complex digestion in proteomic study.
Keywords:Identification of complex protein  Proteomics  Micro  HPLC  Ion  Trap tandem mass spectrometry  Sequence analysis  
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