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Closing the Ring to Bring Up the Light: Synthesis of a Hexacyclic Acridinium Cyanine Dye
Authors:Dr Tariq Mahmood  Yilei Wu  Domitille Loriot  Dr Marina Kuimova  Dr Sylvain Ladame
Institution:1. COMSATS, Institute of Information Technology, Abbottabad Campus (Pakistan);2. Department of Chemistry, Imperial College London, South Kensington Campus, London SW7 2AZ (UK);3. Department of Bioengineering, Imperial College London, South Kensington Campus, London SW7 2AZ (UK), Fax: (+44)?02075949817
Abstract:The synthesis of a geometrically constrained and near‐planar hexacyclic acridinium cyanine dye 9 is reported. When compared to its unlocked and non‐fluorescent monomethine cyanine dye analogue 3 , this photostable dye emits in the green area of the spectrum with a remarkable quantum yield close to unity in organic solvents and above 0.5 in water. A detailed steady‐state and time‐resolved spectroscopic study revealed that dye 9 forms emissive aggregates in water, which are responsible for a red‐shifted and broadened emission band and longer emission lifetime, τ≈33 compared to 6.5–7.0 ns for the monomeric dye. Dye 9 also binds strongly to DNA (both duplex and quadruplex) in its monomeric form and is very efficiently taken up by cells, in which it accumulates primarily into the nucleus.
Keywords:acridines  aggregates  cyanine dyes  fluorescence  nucleic acids
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