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Classification of Rat FTIR Colon Cancer Data Using Wavelets and BPNN
作者姓名:CHENG Cungui  XIONG Wei  TIAN Yumei
作者单位:Zhejiang Key Laboratory for Reactive Chemistry on Solid Surfaces, Department of Chemistry, ;Zhejiang Normal University, Jinhua, Zhejiang 321004, China ;
摘    要:本文提出了一种新的基于水平衰减全反射-傅里叶变换红外光谱(HATR-FTIR)的小波特征提取与反向传播人工神经网络模式分类方法以提高FTIR对早期大鼠结肠癌的诊断准确率.对60只DMH诱导的SD大鼠,44只诱导鼠的第二代鼠,36只正常SD大鼠的结肠正常组织、异常增生、早癌及进展期癌组织所获得的的HATR-FTIR,利用连续小波多尺度分析法提取12个特征量,采用反向传播人工神经网络进行分类,识别准确率分别为100%、94%、97.5%及100%.实验结果表明此方法对早期结肠癌具有较高的诊断率.

关 键 词:结肠早癌  水平衰减全反射-傅里叶变换红外光谱  连续小波变换  人工神经网络
收稿时间:2008-6-6
修稿时间:2008-11-20

Classification of Rat FTIR Colon Cancer Data Using Waveletsand BPNN
CHENG Cungui,XIONG Wei,TIAN Yumei.Classification of Rat FTIR Colon Cancer Data Using Wavelets and BPNN[J].Chinese Journal of Chemistry,2009,27(5):911-914.
Authors:CHENG  Cungui  XIONG  Wei  TIAN  Yumei
Institution:1. Tel.: 0086‐13866997486;2. Fax: 0086‐0579‐82282489;3. Zhejiang Key Laboratory for Reactive Chemistry on Solid Surfaces, Department of Chemistry, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
Abstract:A feature extracting method based on wavelets for horizontal attenuated total reflectance Fourier transform infrared spectroscopy (HATR‐FTIR) and the cancer classification using artificial neural network trained with back‐propagation algorithm is presented. The FTIR data collected from 36 normal Sprague‐dawley (SD) rats, 60 1,2‐DMH‐induced SD rats, and 44 second generation rats of those induced rats were first preprocessed. Then, 12 feature variants were extracted using continuous wavelet analysis. Based on BPNN classification, all spectra were classified into two categories: normal and abnormal ones. The accuracy values of identifying normal, dysplastic, early carcinoma, and advanced carcinoma were 100%, 94%, 97.5%, and 100%, respectively. This result indicated that FTIR with continuous wavelet transform (CWT) and the back‐propagation neural network (BPNN) could effectively and easily diagnose colon cancer in its early stages.
Keywords:colon cancer  horizontal attenuated total reflectance Fourier transform infrared spectroscopy (HATR‐FTIR)  continuous wavelet transform  artificial neural network
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