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DNA碱基分子胞嘧啶和胸腺嘧啶的太赫兹光谱研究
引用本文:闫慧,范文慧,郑转平,刘佳.DNA碱基分子胞嘧啶和胸腺嘧啶的太赫兹光谱研究[J].光谱学与光谱分析,2013,33(10):2612-2616.
作者姓名:闫慧  范文慧  郑转平  刘佳
作者单位:1. 中国科学院西安光学精密机械研究所,瞬态光学与光子技术国家重点实验室,陕西 西安 710119
2. 中原工学院,河南 郑州 450007
基金项目:中国科学院"百人计划"基金项目,中国科学院知识创新工程重要方向性项目,国家重点基础研究发展计划项目,中国科学院与国家外国专家局"创新团队国际合作伙伴计划"项目资助
摘    要:利用太赫兹时域光谱技术获得了DNA碱基分子胞嘧啶和胸腺嘧啶在0.1―3.5 THz的特征吸收谱,发现胞嘧啶在2.53 THz的特征吸收细节信息。采用考虑了周期性边界条件的赝势平面波密度泛函方法对胞嘧啶分子晶体进行了结构优化和晶格动力学计算,模拟重现其太赫兹特征吸收光谱,并成功辨识了胞嘧啶在0.1―3.5 THz的所有特征吸收峰。研究结果表明,这些重要的生物分子在太赫兹频段表现出鲜明的光谱特性,胞嘧啶分子3.5 THz以下的吸收特性均来源于由分子间氢键支配的外振动模式。

关 键 词:太赫兹时域光谱  胞嘧啶  胸腺嘧啶  理论计算    
收稿时间:2013-01-05

Terahertz Spectroscopy of DNA Nucleobases: Cytosine and Thymine
YAN Hui , FAN Wen-hui , ZHENG Zhuan-ping , LIU Jia.Terahertz Spectroscopy of DNA Nucleobases: Cytosine and Thymine[J].Spectroscopy and Spectral Analysis,2013,33(10):2612-2616.
Authors:YAN Hui  FAN Wen-hui  ZHENG Zhuan-ping  LIU Jia
Institution:1. State Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an 710119, China2. Zhongyuan University of Technology, Zhengzhou 450007, China
Abstract:The absorption features of DNA nucleobases cytosine and thymine were measured by terahertz time-domain spectroscopy (THz-TDS) from 0.1 to 3.5 THz. Our experimental results clearly show that these important biomolecules exhibit distinctive absorption features in THz region. To the best of our knowledge, the subtle absorption peak of cytosine at 2.53 THz is reported for the first time. Moreover, geometry optimizations and lattice dynamic calculations on cytosine crystal were also performed with the pseudo-potential plane wave method of density functional theory by taking periodic boundary conditions into account. All measured terahertz absorption features of cytosine were assigned successfully and its absorption spectrum was reproduced according to our calculations. Furthermore, our results show that absorption features of cytosine below 3.5 THz arise from external modes in translation and rotation motions, which are dominated by the intermolecular hydrogen bonds.
Keywords:THz-TDS  Cytosine  Thymine  Theoretical calculation
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