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拉曼光谱的局域动态移动平均全自动基线校准算法
引用本文:高鹏飞,杨蕊,季江,郭汉明,瑚琦,庄松林.拉曼光谱的局域动态移动平均全自动基线校准算法[J].光谱学与光谱分析,2015,35(5):1281-1285.
作者姓名:高鹏飞  杨蕊  季江  郭汉明  瑚琦  庄松林
作者单位:1. 上海市现代光学系统重点实验室,光学仪器与系统教育部工程研究中心,上海理工大学光电信息与计算机工程学院,上海 200093
2. 上海医疗器械高等专科学校医学影像工程系,上海 200093
基金项目:国家自然科学基金项目,霍英东教育基金会青年教师基金项目,上海市教育委员会科研创新项目,上海市研究生创新基金项目,上海智能家居大规模物联共性技术工程中心项目,沪江基金研究基地专项
摘    要:基线校准是极其重要的光谱预处理步骤,能够显著提高后续光谱分析算法的准确性。目前基线校准算法大多数都是手动或半自动的,手动基线校准算法完全依赖于用户的经验,个人主观因素会严重影响基线校准的准确性,半自动基线校准需要针对不同的拉曼光谱设置不同的优化参数,使用不便。提出了一种局域动态移动平均(LDMA)全自动基线校准算法,并且详细阐明了该算法的基本思想和具体算法步骤。该算法采用了改进移动平均算法(MMA)实现拉曼光谱峰的逐渐剥离,通过自动识别原始拉曼光谱的基线子区间来将整个拉曼光谱区间自动分割为多个拉曼峰子区间,从而实现了在每个拉曼峰子区间中动态改变MMA窗口半宽度和控制平滑迭代次数,最大程度地避免了基线校准过度和基线欠校准现象。无论对于凸形基线、指数形基线、反曲线形基线模拟拉曼光谱,还是真实物质的拉曼光谱,LDMA全自动基线校准算法都取得了很好的基线校准效果。

关 键 词:拉曼光谱  基线校准  光谱平滑  窗口平均    
收稿时间:2014-10-21

Locally Dynamically Moving Average Algorithm for the Fully Automated Baseline Correction of Raman Spectrum
GAO Peng-fei,YANG Rui,JI Jiang,GUO Han-ming,HU Qi,ZHUANG Song-lin.Locally Dynamically Moving Average Algorithm for the Fully Automated Baseline Correction of Raman Spectrum[J].Spectroscopy and Spectral Analysis,2015,35(5):1281-1285.
Authors:GAO Peng-fei  YANG Rui  JI Jiang  GUO Han-ming  HU Qi  ZHUANG Song-lin
Institution:1. Shanghai Key Lab of Modern Optical System, and Engineering Research Center of Optical Instrument and System, Ministry of Education, School of Optical-Electrical and Computer Engineering, University of Shanghai for Science and Technology, Shanghai 200093, China2. Department of Medical Imaging Engineering, Shanghai Medical Instrumentation College, Shanghai 200093, China
Abstract:The baseline correction is an extremely important spectral preprocessing step and can significantly improve the accuracy of the subsequent spectral analysis algorithm. At present most of the baseline correction algorithms are manual and semi-automated. The manual baseline correction depends on the user experience and its accuracy is greatly affected by the subjective factor. The semi-automated baseline correction needs to set different optimizing parameters for different Raman spectra, which will be inconvenient to users. In this paper, a locally dynamically moving average algorithm (LDMA) for the fully automated baseline correction is presented and its basic ideas and steps are demonstrated in detail. In the LDMA algorithm the modified moving averaging algorithm (MMA) is used to strip the Raman peaks. By automatically finding the baseline subintervals of the raw Raman spectrum to divide the total spectrum range into multi Raman peak subintervals, the LDMA algorithm succeed in dynamically changing the window half width of the MMA algorithm and controlling the numbers of the smoothing iterations in each Raman peak subinterval. Hence, the phenomena of overcorrection and under-correction are avoided to the most degree. The LDMA algorithm has achieved great effect not only to the synthetic Raman spectra with the convex, exponential, or sigmoidal baseline but also to the real Raman spectra.
Keywords:Raman spectrum  Baseline correction  Spectrum smoothing  Window average
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